RNA–Protein interactions for RNA: ENST00000358181.8

CHD3-202, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CHD3, Length 7,286 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-202ENST00000358181 TLN1Q9Y490 2541 aaKnown RBP6.54□□□□□ -1.36
CHD3-202ENST00000358181 SMCPP49901 116 aaPredicted RBP6.54□□□□□ -1.36
CHD3-202ENST00000358181 PCSK5Q92824 1860 aa6.54□□□□□ -1.36
CHD3-202ENST00000358181 MKI67P46013 3256 aaKnown RBP6.53□□□□□ -1.36
CHD3-202ENST00000358181 C15orf56Q8N910 161 aa6.53□□□□□ -1.36
CHD3-202ENST00000358181 PRR26Q8N8Z3 221 aa6.52□□□□□ -1.37
CHD3-202ENST00000358181 IGLV7-46A0A075B6I9 117 aa6.52□□□□□ -1.37
CHD3-202ENST00000358181 H3BPC8 53 aa6.51□□□□□ -1.37
CHD3-202ENST00000358181 FAM218AQ96MZ4 157 aa6.51□□□□□ -1.37
CHD3-202ENST00000358181 SETD2Q9BYW2 2564 aaPredicted RBP6.51□□□□□ -1.37
CHD3-202ENST00000358181 PIEZO1Q92508 2521 aa6.51□□□□□ -1.37
CHD3-202ENST00000358181 KTN1-AS1Q86SY8 53 aa6.51□□□□□ -1.37
CHD3-202ENST00000358181 COL4A2P08572 1712 aa6.51□□□□□ -1.37
CHD3-202ENST00000358181 A0A096LNJ9 63 aa6.51□□□□□ -1.37
CHD3-202ENST00000358181 MYO9AB2RTY4 2548 aa6.51□□□□□ -1.37
CHD3-202ENST00000358181 H3BS24 57 aa6.5□□□□□ -1.37
CHD3-202ENST00000358181 XIRP2A4UGR9 3374 aa6.5□□□□□ -1.37
CHD3-202ENST00000358181 BRCA2P51587 3418 aa6.49□□□□□ -1.37
CHD3-202ENST00000358181 SPTBN4Q9H254 2564 aa6.49□□□□□ -1.37
CHD3-202ENST00000358181 ANKRD11Q6UB99 2663 aaPredicted RBP6.48□□□□□ -1.37
CHD3-202ENST00000358181 ZNF861PO60384 105 aa6.48□□□□□ -1.37
CHD3-202ENST00000358181 KRTAP10-11P60412 298 aa6.48□□□□□ -1.37
CHD3-202ENST00000358181 A0A1B0GVX0 72 aa6.47□□□□□ -1.37
CHD3-202ENST00000358181 FAM104AQ969W3 186 aa6.47□□□□□ -1.37
CHD3-202ENST00000358181 IGFL1Q6UW32 110 aa6.47□□□□□ -1.37
CHD3-202ENST00000358181 LCA10Q71F78 164 aa6.47□□□□□ -1.37
CHD3-202ENST00000358181 A0A087WTM6 91 aa6.46□□□□□ -1.38
CHD3-202ENST00000358181 CHD8Q9HCK8 2581 aa6.46□□□□□ -1.38
CHD3-202ENST00000358181 HRES1P13985 223 aa6.46□□□□□ -1.38
CHD3-202ENST00000358181 K7EIL1 84 aa6.45□□□□□ -1.38
CHD3-202ENST00000358181 GVQW2A0A096LPI5 108 aaPredicted RBP6.45□□□□□ -1.38
CHD3-202ENST00000358181 IGLV7-43P04211 117 aa6.45□□□□□ -1.38
CHD3-202ENST00000358181 ZNF462Q96JM2 2506 aa6.44□□□□□ -1.38
CHD3-202ENST00000358181 H1FX-AS1Q4G0G2 97 aa6.44□□□□□ -1.38
CHD3-202ENST00000358181 Q8NAQ8 132 aa6.44□□□□□ -1.38
CHD3-202ENST00000358181 DNAH14Q0VDD8 3507 aa6.43□□□□□ -1.38
CHD3-202ENST00000358181 LITAFQ99732 161 aa6.43□□□□□ -1.38
CHD3-202ENST00000358181 S4R3F8 94 aa6.43□□□□□ -1.38
CHD3-202ENST00000358181 H3BNG1 76 aa6.43□□□□□ -1.38
CHD3-202ENST00000358181 PRR15Q8IV56 129 aa6.42□□□□□ -1.38
CHD3-202ENST00000358181 ANKRD17O75179 2603 aaKnown RBP6.42□□□□□ -1.38
CHD3-202ENST00000358181 USP9XQ93008 2570 aaPredicted RBP6.42□□□□□ -1.38
CHD3-202ENST00000358181 POLQO75417 2590 aa6.42□□□□□ -1.38
CHD3-202ENST00000358181 C9orf163Q8N9P6 203 aa6.41□□□□□ -1.38
CHD3-202ENST00000358181 CEP295Q9C0D2 2601 aa6.4□□□□□ -1.38
CHD3-202ENST00000358181 LAMA3Q16787 3333 aa6.4□□□□□ -1.38
CHD3-202ENST00000358181 Q1T7F1 81 aa6.39□□□□□ -1.39
CHD3-202ENST00000358181 LOC110117498A0A087WWA1 95 aa6.39□□□□□ -1.39
CHD3-202ENST00000358181 ACANP16112 2415 aa6.38□□□□□ -1.39
CHD3-202ENST00000358181 CYP4F30PQ9H0H9 118 aa6.38□□□□□ -1.39
CHD3-202ENST00000358181 SPINK7P58062 85 aa6.37□□□□□ -1.39
CHD3-202ENST00000358181 A0A0A0MQY5 61 aa6.36□□□□□ -1.39
CHD3-202ENST00000358181 PRRC2CQ9Y520 2896 aaKnown RBP6.36□□□□□ -1.39
CHD3-202ENST00000358181 COX8CQ7Z4L0 72 aa6.35□□□□□ -1.39
CHD3-202ENST00000358181 KRTAP10-3P60369 221 aa6.35□□□□□ -1.39
CHD3-202ENST00000358181 LINC00612Q8N6U2 182 aa6.34□□□□□ -1.39
CHD3-202ENST00000358181 R4GN34 69 aa6.34□□□□□ -1.39
CHD3-202ENST00000358181 PRUNE2Q8WUY3 3088 aa6.34□□□□□ -1.4
CHD3-202ENST00000358181 BPTFQ12830 3046 aa6.34□□□□□ -1.4
CHD3-202ENST00000358181 PKD1L2Q7Z442 2459 aa6.33□□□□□ -1.4
CHD3-202ENST00000358181 A0A1B0GW54 56 aa6.33□□□□□ -1.4
CHD3-202ENST00000358181 MTORP42345 2549 aa6.33□□□□□ -1.4
CHD3-202ENST00000358181 USP9YO00507 2555 aaPredicted RBP6.33□□□□□ -1.4
CHD3-202ENST00000358181 TNP2Q05952 138 aa6.31□□□□□ -1.4
CHD3-202ENST00000358181 CDH23Q9H251 3354 aa6.31□□□□□ -1.4
CHD3-202ENST00000358181 CFAP54Q96N23 3096 aa6.31□□□□□ -1.4
CHD3-202ENST00000358181 A0A1B0GU33 70 aa6.31□□□□□ -1.4
CHD3-202ENST00000358181 CSAG1Q6PB30 78 aa6.31□□□□□ -1.4
CHD3-202ENST00000358181 CELSR3Q9NYQ7 3312 aa6.31□□□□□ -1.4
CHD3-202ENST00000358181 LAMA2P24043 3122 aaKnown RBP6.3□□□□□ -1.4
CHD3-202ENST00000358181 CASC10Q5T4H9 136 aa6.3□□□□□ -1.4
CHD3-202ENST00000358181 FASNP49327 2511 aaKnown RBP6.3□□□□□ -1.4
CHD3-202ENST00000358181 SZT2Q5T011 3432 aa6.29□□□□□ -1.4
CHD3-202ENST00000358181 KLKP1Q107X0 134 aa6.29□□□□□ -1.4
CHD3-202ENST00000358181 UNC80Q8N2C7 3258 aa6.29□□□□□ -1.4
CHD3-202ENST00000358181 H7BZZ5 65 aa6.28□□□□□ -1.4
CHD3-202ENST00000358181 SPRR4Q96PI1 79 aa6.28□□□□□ -1.4
CHD3-202ENST00000358181 LINC01546A6NGU7 62 aa6.27□□□□□ -1.41
CHD3-202ENST00000358181 F8P00451 2351 aa6.27□□□□□ -1.41
CHD3-202ENST00000358181 CHD7Q9P2D1 2997 aa6.26□□□□□ -1.41
CHD3-202ENST00000358181 Q8N377 158 aa6.26□□□□□ -1.41
CHD3-202ENST00000358181 KCNQ1DNQ9H478 68 aa6.26□□□□□ -1.41
CHD3-202ENST00000358181 Q5XG85 94 aa6.26□□□□□ -1.41
CHD3-202ENST00000358181 RANBP2P49792 3224 aaKnown RBP6.26□□□□□ -1.41
CHD3-202ENST00000358181 M0QZ58 72 aa6.24□□□□□ -1.41
CHD3-202ENST00000358181 EIF4EBP3O60516 100 aaPredicted RBP6.23□□□□□ -1.41
CHD3-202ENST00000358181 SEC61BP60468 96 aaKnown RBP6.21□□□□□ -1.41
CHD3-202ENST00000358181 REV3LO60673 3130 aa6.21□□□□□ -1.42
CHD3-202ENST00000358181 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.2□□□□□ -1.42
CHD3-202ENST00000358181 HTTP42858 3142 aa6.19□□□□□ -1.42
CHD3-202ENST00000358181 TRIOO75962 3097 aa6.18□□□□□ -1.42
CHD3-202ENST00000358181 USP34Q70CQ2 3546 aa6.18□□□□□ -1.42
CHD3-202ENST00000358181 DMAC1Q96GE9 116 aa6.16□□□□□ -1.42
CHD3-202ENST00000358181 C20orf166-AS1Q96NR2 134 aa6.16□□□□□ -1.42
CHD3-202ENST00000358181 GIG44P09565 113 aaPredicted RBP6.16□□□□□ -1.42
CHD3-202ENST00000358181 C19orf73Q9NVV2 129 aa6.16□□□□□ -1.42
CHD3-202ENST00000358181 A0A0C4DFX4 3053 aa6.16□□□□□ -1.42
CHD3-202ENST00000358181 PRAC1Q96KF2 57 aa6.15□□□□□ -1.42
CHD3-202ENST00000358181 USP24Q9UPU5 2620 aa6.15□□□□□ -1.43
CHD3-202ENST00000358181 A0A096LNT2 108 aa6.13□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 75.3 ms