RNA–Protein interactions for RNA: ENST00000342503.8

RTN1-202, Transcript of reticulon 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene RTN1, Length 1,703 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-202ENST00000342503 MRPL55Q7Z7F7 128 aaKnown RBP12.76□□□□□ -0.37
RTN1-202ENST00000342503 Q6ZQY7 126 aa12.76□□□□□ -0.37
RTN1-202ENST00000342503 PRYO14603 147 aa12.75□□□□□ -0.37
RTN1-202ENST00000342503 C9orf163Q8N9P6 203 aa12.75□□□□□ -0.37
RTN1-202ENST00000342503 SIGMAR1Q99720 223 aa12.75□□□□□ -0.37
RTN1-202ENST00000342503 WWC2-AS2Q96NR7 200 aa12.74□□□□□ -0.37
RTN1-202ENST00000342503 A0A1B0GV72 72 aa12.74□□□□□ -0.37
RTN1-202ENST00000342503 C14orf132Q9NPU4 83 aa12.74□□□□□ -0.37
RTN1-202ENST00000342503 FAM240AA0A1B0GVK7 77 aa12.73□□□□□ -0.37
RTN1-202ENST00000342503 A0A1W2PNN7 141 aa12.73□□□□□ -0.37
RTN1-202ENST00000342503 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP12.73□□□□□ -0.37
RTN1-202ENST00000342503 KMT2AQ03164 3969 aa12.71□□□□□ -0.38
RTN1-202ENST00000342503 A0A087WTM6 91 aa12.71□□□□□ -0.38
RTN1-202ENST00000342503 LY6G6CO95867 125 aa12.71□□□□□ -0.38
RTN1-202ENST00000342503 CHTF8P0CG12 524 aa12.71□□□□□ -0.38
RTN1-202ENST00000342503 SPRR1AP35321 89 aa12.71□□□□□ -0.38
RTN1-202ENST00000342503 KRTAP4-16G5E9R7 235 aaPredicted RBP12.7□□□□□ -0.38
RTN1-202ENST00000342503 XGP55808 180 aa12.7□□□□□ -0.38
RTN1-202ENST00000342503 JMJD7-PLA2G4BH0Y9G9 81 aa12.69□□□□□ -0.38
RTN1-202ENST00000342503 H3BQ85 93 aa12.69□□□□□ -0.38
RTN1-202ENST00000342503 PKIGQ9Y2B9 76 aa12.69□□□□□ -0.38
RTN1-202ENST00000342503 GAGE2AQ6NT46 116 aa12.68□□□□□ -0.38
RTN1-202ENST00000342503 SDIM1Q6ZPB5 146 aa12.68□□□□□ -0.38
RTN1-202ENST00000342503 DNAH6Q9C0G6 4158 aa12.68□□□□□ -0.38
RTN1-202ENST00000342503 B5MCH6 92 aa12.68□□□□□ -0.38
RTN1-202ENST00000342503 ACYP1P07311 99 aa12.68□□□□□ -0.38
RTN1-202ENST00000342503 ETDCA0A1B0GVM5 59 aa12.67□□□□□ -0.38
RTN1-202ENST00000342503 MT-ATP8P03928 68 aa12.67□□□□□ -0.38
RTN1-202ENST00000342503 DNAH2Q9P225 4427 aa12.66□□□□□ -0.38
RTN1-202ENST00000342503 Q6ZRX8 168 aa12.65□□□□□ -0.38
RTN1-202ENST00000342503 LINC00476Q8WZB0 136 aa12.65□□□□□ -0.38
RTN1-202ENST00000342503 C1orf134Q5TEV5 83 aa12.65□□□□□ -0.38
RTN1-202ENST00000342503 LAMTOR3Q9UHA4 124 aa12.65□□□□□ -0.38
RTN1-202ENST00000342503 REG3GQ6UW15 175 aa12.64□□□□□ -0.39
RTN1-202ENST00000342503 GHRHP01286 108 aa12.63□□□□□ -0.39
RTN1-202ENST00000342503 ALMS1Q8TCU4 4167 aa12.63□□□□□ -0.39
RTN1-202ENST00000342503 Q9BRP9 147 aa12.62□□□□□ -0.39
RTN1-202ENST00000342503 DHRS4-AS1Q9P1J3 65 aa12.62□□□□□ -0.39
RTN1-202ENST00000342503 TGP01266 2768 aa12.62□□□□□ -0.39
RTN1-202ENST00000342503 PHF5AQ7RTV0 110 aaKnown RBP12.61□□□□□ -0.39
RTN1-202ENST00000342503 LINC00474Q9P2X8 69 aa12.61□□□□□ -0.39
RTN1-202ENST00000342503 HECTD4Q9Y4D8 3996 aa12.61□□□□□ -0.39
RTN1-202ENST00000342503 PANO1I0J062 215 aa12.6□□□□□ -0.39
RTN1-202ENST00000342503 CCKP06307 115 aa12.6□□□□□ -0.39
RTN1-202ENST00000342503 FUSP35637 526 aaKnown RBP eCLIP12.6□□□□□ -0.39
RTN1-202ENST00000342503 RBM3P98179 157 aaKnown RBP12.6□□□□□ -0.39
RTN1-202ENST00000342503 DNAH17Q9UFH2 4485 aa12.6□□□□□ -0.39
RTN1-202ENST00000342503 RTL8CO15255 209 aa12.58□□□□□ -0.4
RTN1-202ENST00000342503 SMCR5Q8TEV8 140 aa12.58□□□□□ -0.4
RTN1-202ENST00000342503 C3orf84H3BNL1 204 aa12.57□□□□□ -0.4
RTN1-202ENST00000342503 NDUFV3P56181 108 aaKnown RBP12.56□□□□□ -0.4
RTN1-202ENST00000342503 UBE2BP63146 152 aa12.56□□□□□ -0.4
RTN1-202ENST00000342503 KRTAP11-1Q8IUC1 163 aa12.56□□□□□ -0.4
RTN1-202ENST00000342503 DEFB105AQ8NG35 78 aa12.56□□□□□ -0.4
RTN1-202ENST00000342503 SPACA4Q8TDM5 124 aa12.55□□□□□ -0.4
RTN1-202ENST00000342503 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP12.55□□□□□ -0.4
RTN1-202ENST00000342503 LOC110117498A0A087WWA1 95 aa12.54□□□□□ -0.4
RTN1-202ENST00000342503 PCP4P48539 62 aa12.54□□□□□ -0.4
RTN1-202ENST00000342503 LINC01547P58512 204 aaPredicted RBP12.54□□□□□ -0.4
RTN1-202ENST00000342503 Q6ZQT0 140 aa12.54□□□□□ -0.4
RTN1-202ENST00000342503 DPH3Q96FX2 82 aa12.54□□□□□ -0.4
RTN1-202ENST00000342503 ERC2-IT1O76042 136 aa12.54□□□□□ -0.4
RTN1-202ENST00000342503 FAM19A1Q7Z5A9 133 aa12.54□□□□□ -0.4
RTN1-202ENST00000342503 Q8N377 158 aa12.54□□□□□ -0.4
RTN1-202ENST00000342503 DSCR8Q96T75 97 aa12.53□□□□□ -0.4
RTN1-202ENST00000342503 ST20-AS1Q8NBB2 130 aa12.52□□□□□ -0.41
RTN1-202ENST00000342503 LINC00846Q9NV44 126 aa12.52□□□□□ -0.41
RTN1-202ENST00000342503 SCGB1A1P11684 91 aa12.51□□□□□ -0.41
RTN1-202ENST00000342503 TNP2Q05952 138 aa12.51□□□□□ -0.41
RTN1-202ENST00000342503 IGLV5-52A0A0A0MRZ9 124 aa12.5□□□□□ -0.41
RTN1-202ENST00000342503 PRLHP81277 87 aa12.5□□□□□ -0.41
RTN1-202ENST00000342503 LINC00643Q86TS7 51 aa12.5□□□□□ -0.41
RTN1-202ENST00000342503 FRAS1Q86XX4 4008 aa12.49□□□□□ -0.41
RTN1-202ENST00000342503 TRBV7-4A0A0J9YYF1 115 aa12.48□□□□□ -0.41
RTN1-202ENST00000342503 EPM2AB3EWF7 344 aa12.48□□□□□ -0.41
RTN1-202ENST00000342503 IGLV5-48A0A075B6I7 105 aa12.48□□□□□ -0.41
RTN1-202ENST00000342503 PDE6GP18545 87 aa12.47□□□□□ -0.41
RTN1-202ENST00000342503 C3orf22Q8N5N4 141 aa12.44□□□□□ -0.42
RTN1-202ENST00000342503 HYDINQ4G0P3 5121 aa12.43□□□□□ -0.42
RTN1-202ENST00000342503 HIGD2AQ9BW72 106 aa12.42□□□□□ -0.42
RTN1-202ENST00000342503 TRBV7-7A0A0K0K1E9 115 aa12.42□□□□□ -0.42
RTN1-202ENST00000342503 H0Y9J4 135 aa12.42□□□□□ -0.42
RTN1-202ENST00000342503 Q6Q795 121 aa12.42□□□□□ -0.42
RTN1-202ENST00000342503 C21orf62-AS1Q17RA5 79 aa12.4□□□□□ -0.42
RTN1-202ENST00000342503 BCE1O60756 84 aa12.4□□□□□ -0.43
RTN1-202ENST00000342503 UBE2AP49459 152 aa12.4□□□□□ -0.43
RTN1-202ENST00000342503 PLAC8Q9NZF1 115 aa12.4□□□□□ -0.43
RTN1-202ENST00000342503 DNAH11Q96DT5 4516 aa12.39□□□□□ -0.43
RTN1-202ENST00000342503 Q6JHZ5 121 aa12.38□□□□□ -0.43
RTN1-202ENST00000342503 KRTAP10-2P60368 255 aa12.37□□□□□ -0.43
RTN1-202ENST00000342503 SMIM29Q86T20 159 aa12.37□□□□□ -0.43
RTN1-202ENST00000342503 IGKV3D-7A0A0C4DH55 119 aa12.36□□□□□ -0.43
RTN1-202ENST00000342503 UBL5Q9BZL1 73 aa12.36□□□□□ -0.43
RTN1-202ENST00000342503 IMUPQ9GZP8 106 aa12.35□□□□□ -0.43
RTN1-202ENST00000342503 DNAH5Q8TE73 4624 aa12.35□□□□□ -0.43
RTN1-202ENST00000342503 KRTAP13-1Q8IUC0 172 aa12.34□□□□□ -0.43
RTN1-202ENST00000342503 LCE2BO14633 110 aa12.34□□□□□ -0.43
RTN1-202ENST00000342503 DNAH8Q96JB1 4490 aa12.33□□□□□ -0.44
RTN1-202ENST00000342503 C1orf137Q5JT78 98 aa12.31□□□□□ -0.44
RTN1-202ENST00000342503 Q6ZVQ6 151 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms