RNA–Protein interactions for RNA: ENST00000340647.8

BRCC3-202, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

APPRIS P2 TSL 2 BASIC

Gene BRCC3, Length 1,101 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-202ENST00000340647 ZNF706Q9Y5V0 76 aaPredicted RBP9.7□□□□□ -0.86
BRCC3-202ENST00000340647 Q8NBF4 154 aa9.69□□□□□ -0.86
BRCC3-202ENST00000340647 IGLV7-46A0A075B6I9 117 aa9.68□□□□□ -0.86
BRCC3-202ENST00000340647 Q6ZRX8 168 aa9.68□□□□□ -0.86
BRCC3-202ENST00000340647 SPAG11AQ6PDA7 123 aa9.67□□□□□ -0.86
BRCC3-202ENST00000340647 TTTY13Q9BZ97 58 aa9.67□□□□□ -0.86
BRCC3-202ENST00000340647 A0A0U1RQV1 116 aa9.66□□□□□ -0.86
BRCC3-202ENST00000340647 GAGE2AQ6NT46 116 aa9.66□□□□□ -0.86
BRCC3-202ENST00000340647 KRTAP9-6A0A140TA67 174 aa9.65□□□□□ -0.86
BRCC3-202ENST00000340647 C3orf79P0CE67 100 aa9.65□□□□□ -0.86
BRCC3-202ENST00000340647 COA6Q5JTJ3 125 aaKnown RBP9.65□□□□□ -0.86
BRCC3-202ENST00000340647 PET117Q6UWS5 81 aa9.64□□□□□ -0.87
BRCC3-202ENST00000340647 MIEN1Q9BRT3 115 aa9.64□□□□□ -0.87
BRCC3-202ENST00000340647 TRAV23DV6A0A075B6W5 121 aa9.63□□□□□ -0.87
BRCC3-202ENST00000340647 LINC00308Q8TCZ7 52 aa9.63□□□□□ -0.87
BRCC3-202ENST00000340647 S100A7L2Q5SY68 101 aa9.62□□□□□ -0.87
BRCC3-202ENST00000340647 ZNF73O43830 326 aaPredicted RBP9.61□□□□□ -0.87
BRCC3-202ENST00000340647 TIMM17BO60830 172 aa9.61□□□□□ -0.87
BRCC3-202ENST00000340647 MOBPQ13875 183 aa9.61□□□□□ -0.87
BRCC3-202ENST00000340647 ST20-AS1Q8NBB2 130 aa9.61□□□□□ -0.87
BRCC3-202ENST00000340647 CDIP1Q9H305 208 aa9.6□□□□□ -0.87
BRCC3-202ENST00000340647 IGLV9-49A0A0B4J1Y8 123 aa9.59□□□□□ -0.87
BRCC3-202ENST00000340647 S100A12P80511 92 aa9.59□□□□□ -0.87
BRCC3-202ENST00000340647 KRTAP13-3Q3SY46 172 aa9.59□□□□□ -0.87
BRCC3-202ENST00000340647 ZNF815PA8K554 130 aa9.58□□□□□ -0.88
BRCC3-202ENST00000340647 SPINK1P00995 79 aa9.58□□□□□ -0.88
BRCC3-202ENST00000340647 FP248Q71RG6 208 aaPredicted RBP9.58□□□□□ -0.88
BRCC3-202ENST00000340647 SSBP3-AS1Q7Z2R9 100 aa9.58□□□□□ -0.88
BRCC3-202ENST00000340647 SPANXCQ9NY87 97 aa9.58□□□□□ -0.88
BRCC3-202ENST00000340647 ANKRD39Q53RE8 183 aa9.57□□□□□ -0.88
BRCC3-202ENST00000340647 C4orf48Q5BLP8 95 aa9.57□□□□□ -0.88
BRCC3-202ENST00000340647 Q8N377 158 aa9.57□□□□□ -0.88
BRCC3-202ENST00000340647 KRTDAPP60985 99 aa9.54□□□□□ -0.88
BRCC3-202ENST00000340647 SPRR1BP22528 89 aa9.53□□□□□ -0.88
BRCC3-202ENST00000340647 RPS29P62273 56 aaKnown RBP9.53□□□□□ -0.88
BRCC3-202ENST00000340647 JOSD1Q15040 202 aaPredicted RBP9.53□□□□□ -0.88
BRCC3-202ENST00000340647 ATOH7Q8N100 152 aa9.51□□□□□ -0.89
BRCC3-202ENST00000340647 OR13C6PQ8NH95 151 aa9.51□□□□□ -0.89
BRCC3-202ENST00000340647 SPANXDQ9BXN6 97 aa9.51□□□□□ -0.89
BRCC3-202ENST00000340647 KRTAP4-1Q9BYQ7 146 aa9.51□□□□□ -0.89
BRCC3-202ENST00000340647 C5orf52A6NGY3 159 aa9.5□□□□□ -0.89
BRCC3-202ENST00000340647 PCP2Q8IVA1 136 aa9.5□□□□□ -0.89
BRCC3-202ENST00000340647 ELOF1P60002 83 aaKnown RBP9.49□□□□□ -0.89
BRCC3-202ENST00000340647 C6orf99Q4VX62 202 aa9.48□□□□□ -0.89
BRCC3-202ENST00000340647 C9orf153Q5TBE3 101 aa9.47□□□□□ -0.89
BRCC3-202ENST00000340647 ASB16-AS1Q495Z4 193 aa9.46□□□□□ -0.9
BRCC3-202ENST00000340647 LINC00518Q8N0U6 118 aa9.46□□□□□ -0.9
BRCC3-202ENST00000340647 DHRS4-AS1Q9P1J3 65 aa9.45□□□□□ -0.9
BRCC3-202ENST00000340647 SLC25A20O43772 301 aa9.44□□□□□ -0.9
BRCC3-202ENST00000340647 COX7BP24311 80 aa9.44□□□□□ -0.9
BRCC3-202ENST00000340647 HINT1P49773 126 aaPredicted RBP9.44□□□□□ -0.9
BRCC3-202ENST00000340647 LINC01547P58512 204 aaPredicted RBP9.44□□□□□ -0.9
BRCC3-202ENST00000340647 MUSTN1Q8IVN3 82 aa9.44□□□□□ -0.9
BRCC3-202ENST00000340647 CBY1Q9Y3M2 126 aa9.44□□□□□ -0.9
BRCC3-202ENST00000340647 SCGB1D4Q6XE38 83 aa9.43□□□□□ -0.9
BRCC3-202ENST00000340647 SMIM29Q86T20 159 aa9.43□□□□□ -0.9
BRCC3-202ENST00000340647 HIST3H2BBQ8N257 126 aa9.42□□□□□ -0.9
BRCC3-202ENST00000340647 C20orf202A1L168 122 aa9.41□□□□□ -0.9
BRCC3-202ENST00000340647 IFITM1P13164 125 aa9.41□□□□□ -0.9
BRCC3-202ENST00000340647 TRBV7-6A0A0J9YX20 115 aa9.4□□□□□ -0.9
BRCC3-202ENST00000340647 HIST1H2BLQ99880 126 aa9.4□□□□□ -0.9
BRCC3-202ENST00000340647 XP32Q5T750 250 aa9.39□□□□□ -0.91
BRCC3-202ENST00000340647 Q6ZVH6 145 aa9.39□□□□□ -0.91
BRCC3-202ENST00000340647 HRCT1Q6UXD1 115 aa9.38□□□□□ -0.91
BRCC3-202ENST00000340647 IGLV5-48A0A075B6I7 105 aa9.37□□□□□ -0.91
BRCC3-202ENST00000340647 Q1RN00 199 aa9.37□□□□□ -0.91
BRCC3-202ENST00000340647 DEFB105AQ8NG35 78 aa9.37□□□□□ -0.91
BRCC3-202ENST00000340647 A0A0G2JQZ4 141 aa9.36□□□□□ -0.91
BRCC3-202ENST00000340647 A0A1B0GWB2 263 aa9.36□□□□□ -0.91
BRCC3-202ENST00000340647 LAMTOR3Q9UHA4 124 aa9.36□□□□□ -0.91
BRCC3-202ENST00000340647 TEX49A0A1B0GTD5 131 aa9.35□□□□□ -0.91
BRCC3-202ENST00000340647 A6NDN8 102 aa9.35□□□□□ -0.91
BRCC3-202ENST00000340647 TAL2Q16559 108 aa9.35□□□□□ -0.91
BRCC3-202ENST00000340647 SMIM11BQ8TCY0 68 aa9.35□□□□□ -0.91
BRCC3-202ENST00000340647 SLC25A34Q6PIV7 304 aa9.34□□□□□ -0.91
BRCC3-202ENST00000340647 SNRPEP62304 92 aaKnown RBP9.33□□□□□ -0.92
BRCC3-202ENST00000340647 COPS9Q8WXC6 57 aa9.32□□□□□ -0.92
BRCC3-202ENST00000340647 AKR1D1P51857 326 aa9.31□□□□□ -0.92
BRCC3-202ENST00000340647 SEC61BP60468 96 aaKnown RBP9.31□□□□□ -0.92
BRCC3-202ENST00000340647 CD164Q04900 197 aa9.31□□□□□ -0.92
BRCC3-202ENST00000340647 TRAV13-2A0A0B4J235 113 aa9.29□□□□□ -0.92
BRCC3-202ENST00000340647 H7C2G1 150 aa9.29□□□□□ -0.92
BRCC3-202ENST00000340647 LIMD2Q9BT23 127 aa9.29□□□□□ -0.92
BRCC3-202ENST00000340647 PRO1933Q9H354 126 aa9.29□□□□□ -0.92
BRCC3-202ENST00000340647 A4D1N5 150 aa9.28□□□□□ -0.92
BRCC3-202ENST00000340647 KRTAP19-2Q3LHN2 52 aa9.28□□□□□ -0.92
BRCC3-202ENST00000340647 Q5XG85 94 aa9.28□□□□□ -0.92
BRCC3-202ENST00000340647 S100A2P29034 98 aa9.27□□□□□ -0.93
BRCC3-202ENST00000340647 LCE2CQ5TA81 110 aa9.27□□□□□ -0.93
BRCC3-202ENST00000340647 FSIP2Q5CZC0 6907 aa9.25□□□□□ -0.93
BRCC3-202ENST00000340647 C9orf92A6NGG3 77 aa9.25□□□□□ -0.93
BRCC3-202ENST00000340647 S100A1P23297 94 aa9.25□□□□□ -0.93
BRCC3-202ENST00000340647 C1orf195Q5TG92 126 aa9.25□□□□□ -0.93
BRCC3-202ENST00000340647 LINC00575Q6W349 94 aa9.25□□□□□ -0.93
BRCC3-202ENST00000340647 CRCT1Q9UGL9 99 aa9.23□□□□□ -0.93
BRCC3-202ENST00000340647 HSBP1L1C9JCN9 74 aa9.2□□□□□ -0.94
BRCC3-202ENST00000340647 PCOTHQ58A44 107 aa9.2□□□□□ -0.94
BRCC3-202ENST00000340647 S100A6P06703 90 aa9.19□□□□□ -0.94
BRCC3-202ENST00000340647 C12orf57Q99622 126 aa9.19□□□□□ -0.94
BRCC3-202ENST00000340647 NHP2Q9NX24 153 aaKnown RBP9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 134.7 ms