RNA–Protein interactions for RNA: ENST00000338745.10

SATB1-201, Transcript of SATB homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SATB1, Length 7,810 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SATB1-201ENST00000338745 IGLV5-48A0A075B6I7 105 aa10.8□□□□□ -0.68
SATB1-201ENST00000338745 TLX1NBP0CAT3 122 aa10.8□□□□□ -0.68
SATB1-201ENST00000338745 GIG44P09565 113 aaPredicted RBP10.8□□□□□ -0.68
SATB1-201ENST00000338745 SPANXA2-OT1Q8N9U9 137 aa10.79□□□□□ -0.68
SATB1-201ENST00000338745 WWC2-AS2Q96NR7 200 aa10.79□□□□□ -0.68
SATB1-201ENST00000338745 K7EIL1 84 aa10.77□□□□□ -0.68
SATB1-201ENST00000338745 CASC10Q5T4H9 136 aa10.77□□□□□ -0.68
SATB1-201ENST00000338745 A0A087WTM6 91 aa10.77□□□□□ -0.69
SATB1-201ENST00000338745 A0A1W2PNM2 257 aa10.76□□□□□ -0.69
SATB1-201ENST00000338745 IGLV7-43P04211 117 aa10.76□□□□□ -0.69
SATB1-201ENST00000338745 CR1P17927 2039 aa10.75□□□□□ -0.69
SATB1-201ENST00000338745 PSORS1C2Q9UIG4 136 aa10.75□□□□□ -0.69
SATB1-201ENST00000338745 RBM12B-AS1Q9P1G2 102 aa10.74□□□□□ -0.69
SATB1-201ENST00000338745 C19orf73Q9NVV2 129 aa10.73□□□□□ -0.69
SATB1-201ENST00000338745 SPRR4Q96PI1 79 aa10.73□□□□□ -0.69
SATB1-201ENST00000338745 Q1T7F1 81 aa10.72□□□□□ -0.69
SATB1-201ENST00000338745 NAV2Q8IVL1 2488 aa10.71□□□□□ -0.69
SATB1-201ENST00000338745 FN1P02751 2386 aaKnown RBP10.71□□□□□ -0.69
SATB1-201ENST00000338745 ZNF575Q86XF7 245 aa10.69□□□□□ -0.7
SATB1-201ENST00000338745 FAM229BQ4G0N7 80 aa10.69□□□□□ -0.7
SATB1-201ENST00000338745 UTRNP46939 3433 aa10.66□□□□□ -0.7
SATB1-201ENST00000338745 C9orf163Q8N9P6 203 aa10.66□□□□□ -0.7
SATB1-201ENST00000338745 LINC00612Q8N6U2 182 aa10.65□□□□□ -0.7
SATB1-201ENST00000338745 OCR1Q9BZK8 76 aa10.65□□□□□ -0.7
SATB1-201ENST00000338745 CCDC168Q8NDH2 2452 aa10.65□□□□□ -0.7
SATB1-201ENST00000338745 ANKRD17O75179 2603 aaKnown RBP10.65□□□□□ -0.7
SATB1-201ENST00000338745 LUZP6Q538Z0 58 aa10.64□□□□□ -0.71
SATB1-201ENST00000338745 IGF2RP11717 2491 aa10.62□□□□□ -0.71
SATB1-201ENST00000338745 PRR26Q8N8Z3 221 aa10.62□□□□□ -0.71
SATB1-201ENST00000338745 CNBPP62633 177 aaKnown RBP10.59□□□□□ -0.71
SATB1-201ENST00000338745 C5orf42Q9H799 3197 aa10.57□□□□□ -0.72
SATB1-201ENST00000338745 Q75L30 129 aa10.56□□□□□ -0.72
SATB1-201ENST00000338745 NOTCH2Q04721 2471 aa10.56□□□□□ -0.72
SATB1-201ENST00000338745 TTC28Q96AY4 2481 aa10.55□□□□□ -0.72
SATB1-201ENST00000338745 A0A096LNT2 108 aa10.54□□□□□ -0.72
SATB1-201ENST00000338745 IGLV7-46A0A075B6I9 117 aa10.53□□□□□ -0.72
SATB1-201ENST00000338745 MYO9AB2RTY4 2548 aa10.53□□□□□ -0.72
SATB1-201ENST00000338745 A0A1B0GU33 70 aa10.52□□□□□ -0.73
SATB1-201ENST00000338745 Q5XG85 94 aa10.51□□□□□ -0.73
SATB1-201ENST00000338745 HRES1P13985 223 aa10.51□□□□□ -0.73
SATB1-201ENST00000338745 BPTFQ12830 3046 aa10.51□□□□□ -0.73
SATB1-201ENST00000338745 CACNA1AO00555 2505 aa10.5□□□□□ -0.73
SATB1-201ENST00000338745 WIPF1O43516 503 aa10.48□□□□□ -0.73
SATB1-201ENST00000338745 CYSTM1Q9H1C7 97 aa10.47□□□□□ -0.73
SATB1-201ENST00000338745 PRAC1Q96KF2 57 aa10.47□□□□□ -0.73
SATB1-201ENST00000338745 H3BS24 57 aa10.47□□□□□ -0.73
SATB1-201ENST00000338745 LINC00483Q53H64 154 aa10.45□□□□□ -0.74
SATB1-201ENST00000338745 Q6ZSA8 131 aa10.42□□□□□ -0.74
SATB1-201ENST00000338745 ABCA12Q86UK0 2595 aa10.42□□□□□ -0.74
SATB1-201ENST00000338745 CAMK2N1Q7Z7J9 78 aa10.42□□□□□ -0.74
SATB1-201ENST00000338745 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.41□□□□□ -0.74
SATB1-201ENST00000338745 CSAG1Q6PB30 78 aa10.4□□□□□ -0.74
SATB1-201ENST00000338745 S4R3F8 94 aa10.4□□□□□ -0.75
SATB1-201ENST00000338745 FP248Q71RG6 208 aaPredicted RBP10.38□□□□□ -0.75
SATB1-201ENST00000338745 LINC01558Q9Y6Z2 57 aa10.36□□□□□ -0.75
SATB1-201ENST00000338745 TNP2Q05952 138 aa10.36□□□□□ -0.75
SATB1-201ENST00000338745 Q8N9P0 234 aaPredicted RBP10.36□□□□□ -0.75
SATB1-201ENST00000338745 Q5VV11 94 aa10.36□□□□□ -0.75
SATB1-201ENST00000338745 KRTAP1-3Q8IUG1 177 aa10.36□□□□□ -0.75
SATB1-201ENST00000338745 PCNTO95613 3336 aa10.36□□□□□ -0.75
SATB1-201ENST00000338745 MMP24-AS1A0A0U1RRL7 71 aa10.35□□□□□ -0.75
SATB1-201ENST00000338745 MYO18BQ8IUG5 2567 aa10.34□□□□□ -0.75
SATB1-201ENST00000338745 ZFYVE26Q68DK2 2539 aa10.34□□□□□ -0.75
SATB1-201ENST00000338745 TLN1Q9Y490 2541 aaKnown RBP10.34□□□□□ -0.75
SATB1-201ENST00000338745 SPINK7P58062 85 aa10.33□□□□□ -0.76
SATB1-201ENST00000338745 Q8NDZ9 215 aa10.33□□□□□ -0.76
SATB1-201ENST00000338745 DMAC1Q96GE9 116 aa10.32□□□□□ -0.76
SATB1-201ENST00000338745 DOPEY1Q5JWR5 2465 aa10.3□□□□□ -0.76
SATB1-201ENST00000338745 TLN2Q9Y4G6 2542 aa10.3□□□□□ -0.76
SATB1-201ENST00000338745 ZCCHC13Q8WW36 166 aaKnown RBP10.3□□□□□ -0.76
SATB1-201ENST00000338745 NCOR2Q9Y618 2525 aa10.3□□□□□ -0.76
SATB1-201ENST00000338745 M0R2T5 61 aa10.28□□□□□ -0.76
SATB1-201ENST00000338745 Q5W150 140 aa10.27□□□□□ -0.77
SATB1-201ENST00000338745 KRTAP1-1Q07627 177 aa10.23□□□□□ -0.77
SATB1-201ENST00000338745 JMJD1CQ15652 2540 aa10.22□□□□□ -0.77
SATB1-201ENST00000338745 ANKRD11Q6UB99 2663 aaPredicted RBP10.17□□□□□ -0.78
SATB1-201ENST00000338745 OXTP01178 125 aa10.17□□□□□ -0.78
SATB1-201ENST00000338745 USP9XQ93008 2570 aaPredicted RBP10.16□□□□□ -0.78
SATB1-201ENST00000338745 LINC00472Q9H8W2 130 aa10.15□□□□□ -0.78
SATB1-201ENST00000338745 PLAC8Q9NZF1 115 aa10.14□□□□□ -0.79
SATB1-201ENST00000338745 SETD2Q9BYW2 2564 aaPredicted RBP10.13□□□□□ -0.79
SATB1-201ENST00000338745 A0A0A0MQY5 61 aa10.13□□□□□ -0.79
SATB1-201ENST00000338745 ROMO1P60602 79 aa10.12□□□□□ -0.79
SATB1-201ENST00000338745 SPRR1AP35321 89 aa10.12□□□□□ -0.79
SATB1-201ENST00000338745 PKD1L2Q7Z442 2459 aa10.09□□□□□ -0.79
SATB1-201ENST00000338745 KRTAP26-1Q6PEX3 210 aa10.09□□□□□ -0.79
SATB1-201ENST00000338745 CEP350Q5VT06 3117 aa10.09□□□□□ -0.79
SATB1-201ENST00000338745 R4GN34 69 aa10.08□□□□□ -0.8
SATB1-201ENST00000338745 F8P00451 2351 aa10.07□□□□□ -0.8
SATB1-201ENST00000338745 H1FX-AS1Q4G0G2 97 aa10.05□□□□□ -0.8
SATB1-201ENST00000338745 MKI67P46013 3256 aaKnown RBP10.05□□□□□ -0.8
SATB1-201ENST00000338745 CHD8Q9HCK8 2581 aa10.04□□□□□ -0.8
SATB1-201ENST00000338745 ACANP16112 2415 aa10.02□□□□□ -0.81
SATB1-201ENST00000338745 SPATA8Q6RVD6 105 aa10□□□□□ -0.81
SATB1-201ENST00000338745 RPL37P61927 97 aaKnown RBP10□□□□□ -0.81
SATB1-201ENST00000338745 ZNF462Q96JM2 2506 aa9.98□□□□□ -0.81
SATB1-201ENST00000338745 POLQO75417 2590 aa9.97□□□□□ -0.81
SATB1-201ENST00000338745 SPRR1BP22528 89 aa9.95□□□□□ -0.82
SATB1-201ENST00000338745 ADM2Q7Z4H4 148 aa9.95□□□□□ -0.82
SATB1-201ENST00000338745 XIRP2A4UGR9 3374 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms