RNA–Protein interactions for RNA: ENST00000334414.10

PTPRB-202, Transcript of protein tyrosine phosphatase, receptor type B, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPRB, Length 12,316 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRB-202ENST00000334414 KRTAP16-1A8MUX0 517 aa3.49□□□□□ -1.85
PTPRB-202ENST00000334414 SPRR1BP22528 89 aa3.49□□□□□ -1.85
PTPRB-202ENST00000334414 A0A087WTM6 91 aa3.48□□□□□ -1.85
PTPRB-202ENST00000334414 S4R3F8 94 aa3.48□□□□□ -1.85
PTPRB-202ENST00000334414 ZCCHC13Q8WW36 166 aaKnown RBP3.48□□□□□ -1.85
PTPRB-202ENST00000334414 WWC2-AS2Q96NR7 200 aa3.48□□□□□ -1.85
PTPRB-202ENST00000334414 PRR26Q8N8Z3 221 aa3.48□□□□□ -1.85
PTPRB-202ENST00000334414 SMR3AQ99954 134 aa3.48□□□□□ -1.85
PTPRB-202ENST00000334414 MUC4Q99102 2169 aa3.47□□□□□ -1.85
PTPRB-202ENST00000334414 PSORS1C2Q9UIG4 136 aa3.47□□□□□ -1.85
PTPRB-202ENST00000334414 C9orf92A6NGG3 77 aa3.47□□□□□ -1.85
PTPRB-202ENST00000334414 SPRR1AP35321 89 aa3.47□□□□□ -1.85
PTPRB-202ENST00000334414 KRTAP10-9P60411 292 aa3.47□□□□□ -1.85
PTPRB-202ENST00000334414 Q6ZR54 194 aa3.47□□□□□ -1.85
PTPRB-202ENST00000334414 RPL37P61927 97 aaKnown RBP3.46□□□□□ -1.85
PTPRB-202ENST00000334414 ZNF575Q86XF7 245 aa3.46□□□□□ -1.86
PTPRB-202ENST00000334414 LINC00472Q9H8W2 130 aa3.46□□□□□ -1.86
PTPRB-202ENST00000334414 SPINK7P58062 85 aa3.46□□□□□ -1.86
PTPRB-202ENST00000334414 PRAC1Q96KF2 57 aa3.46□□□□□ -1.86
PTPRB-202ENST00000334414 CUL9Q8IWT3 2517 aa3.45□□□□□ -1.86
PTPRB-202ENST00000334414 SPATA8Q6RVD6 105 aa3.45□□□□□ -1.86
PTPRB-202ENST00000334414 A6NN06 94 aa3.45□□□□□ -1.86
PTPRB-202ENST00000334414 Q5W150 140 aa3.44□□□□□ -1.86
PTPRB-202ENST00000334414 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP3.44□□□□□ -1.86
PTPRB-202ENST00000334414 A0A096LNT2 108 aa3.44□□□□□ -1.86
PTPRB-202ENST00000334414 J3QL48 77 aa3.44□□□□□ -1.86
PTPRB-202ENST00000334414 CYSTM1Q9H1C7 97 aa3.43□□□□□ -1.86
PTPRB-202ENST00000334414 CSPG4Q6UVK1 2322 aa3.43□□□□□ -1.86
PTPRB-202ENST00000334414 A0A1W2PNN7 141 aa3.43□□□□□ -1.86
PTPRB-202ENST00000334414 NBASA2RRP1 2371 aa3.43□□□□□ -1.86
PTPRB-202ENST00000334414 H1FX-AS1Q4G0G2 97 aa3.43□□□□□ -1.86
PTPRB-202ENST00000334414 Q6ZSA8 131 aa3.42□□□□□ -1.86
PTPRB-202ENST00000334414 KRTAP25-1Q3LHN0 102 aa3.41□□□□□ -1.86
PTPRB-202ENST00000334414 OXTP01178 125 aa3.41□□□□□ -1.86
PTPRB-202ENST00000334414 PLAC8Q9NZF1 115 aa3.41□□□□□ -1.86
PTPRB-202ENST00000334414 LCE6AA0A183 80 aa3.4□□□□□ -1.86
PTPRB-202ENST00000334414 KRTAP10-11P60412 298 aa3.4□□□□□ -1.87
PTPRB-202ENST00000334414 SEC61BP60468 96 aaKnown RBP3.39□□□□□ -1.87
PTPRB-202ENST00000334414 R4GN34 69 aa3.39□□□□□ -1.87
PTPRB-202ENST00000334414 KRTAP24-1Q3LI83 254 aa3.39□□□□□ -1.87
PTPRB-202ENST00000334414 A0A0G2JQZ4 141 aa3.38□□□□□ -1.87
PTPRB-202ENST00000334414 SPG11Q96JI7 2443 aa3.38□□□□□ -1.87
PTPRB-202ENST00000334414 RPS29P62273 56 aaKnown RBP3.37□□□□□ -1.87
PTPRB-202ENST00000334414 KRTAP26-1Q6PEX3 210 aa3.37□□□□□ -1.87
PTPRB-202ENST00000334414 K7EIL1 84 aa3.36□□□□□ -1.87
PTPRB-202ENST00000334414 MYO18BQ8IUG5 2567 aa3.36□□□□□ -1.87
PTPRB-202ENST00000334414 KRTAP29-1A8MX34 341 aaPredicted RBP3.36□□□□□ -1.87
PTPRB-202ENST00000334414 OTOGLQ3ZCN5 2332 aa3.35□□□□□ -1.87
PTPRB-202ENST00000334414 FAM208BQ5VWN6 2430 aa3.35□□□□□ -1.87
PTPRB-202ENST00000334414 GPR179Q6PRD1 2367 aa3.35□□□□□ -1.87
PTPRB-202ENST00000334414 RIF1Q5UIP0 2472 aaKnown RBP3.34□□□□□ -1.87
PTPRB-202ENST00000334414 ANAPC11Q9NYG5 84 aa3.34□□□□□ -1.88
PTPRB-202ENST00000334414 M0QZ58 72 aa3.33□□□□□ -1.88
PTPRB-202ENST00000334414 NAV2Q8IVL1 2488 aa3.32□□□□□ -1.88
PTPRB-202ENST00000334414 ABCA2Q9BZC7 2435 aa3.32□□□□□ -1.88
PTPRB-202ENST00000334414 MYO9AB2RTY4 2548 aa3.32□□□□□ -1.88
PTPRB-202ENST00000334414 PANO1I0J062 215 aa3.31□□□□□ -1.88
PTPRB-202ENST00000334414 CASC10Q5T4H9 136 aa3.31□□□□□ -1.88
PTPRB-202ENST00000334414 HIVEP3Q5T1R4 2406 aa3.3□□□□□ -1.88
PTPRB-202ENST00000334414 KRTAP4-16G5E9R7 235 aaPredicted RBP3.3□□□□□ -1.88
PTPRB-202ENST00000334414 KRTAP10-3P60369 221 aa3.29□□□□□ -1.88
PTPRB-202ENST00000334414 EP400Q96L91 3159 aa3.29□□□□□ -1.88
PTPRB-202ENST00000334414 Q8NDZ9 215 aa3.29□□□□□ -1.88
PTPRB-202ENST00000334414 MUC6Q6W4X9 2439 aa3.29□□□□□ -1.88
PTPRB-202ENST00000334414 C2CD3Q4AC94 2353 aa3.29□□□□□ -1.88
PTPRB-202ENST00000334414 CR1P17927 2039 aa3.29□□□□□ -1.88
PTPRB-202ENST00000334414 PP632Q6XCG6 107 aa3.28□□□□□ -1.88
PTPRB-202ENST00000334414 ZFHX2Q9C0A1 2572 aaPredicted RBP3.28□□□□□ -1.88
PTPRB-202ENST00000334414 ACACBO00763 2458 aa3.27□□□□□ -1.89
PTPRB-202ENST00000334414 NOTCH2NLQ7Z3S9 236 aa3.27□□□□□ -1.89
PTPRB-202ENST00000334414 PLAC4Q8WY50 150 aa3.26□□□□□ -1.89
PTPRB-202ENST00000334414 SONP18583 2426 aaKnown RBP3.25□□□□□ -1.89
PTPRB-202ENST00000334414 PTPN13Q12923 2485 aa3.25□□□□□ -1.89
PTPRB-202ENST00000334414 CACNA1AO00555 2505 aa3.24□□□□□ -1.89
PTPRB-202ENST00000334414 ADM2Q7Z4H4 148 aa3.24□□□□□ -1.89
PTPRB-202ENST00000334414 LRRK2Q5S007 2527 aa3.24□□□□□ -1.89
PTPRB-202ENST00000334414 DOPEY1Q5JWR5 2465 aa3.24□□□□□ -1.89
PTPRB-202ENST00000334414 ANKRD17O75179 2603 aaKnown RBP3.23□□□□□ -1.89
PTPRB-202ENST00000334414 NDUFAF8A1L188 74 aa3.23□□□□□ -1.89
PTPRB-202ENST00000334414 M0R2T5 61 aa3.22□□□□□ -1.89
PTPRB-202ENST00000334414 SMR3BP02814 79 aaPredicted RBP3.22□□□□□ -1.89
PTPRB-202ENST00000334414 CCDC168Q8NDH2 2452 aa3.21□□□□□ -1.9
PTPRB-202ENST00000334414 C20orf166-AS1Q96NR2 134 aa3.2□□□□□ -1.9
PTPRB-202ENST00000334414 KRTAP1-3Q8IUG1 177 aa3.2□□□□□ -1.9
PTPRB-202ENST00000334414 A8MUU9 505 aa3.2□□□□□ -1.9
PTPRB-202ENST00000334414 KRTAP1-1Q07627 177 aa3.2□□□□□ -1.9
PTPRB-202ENST00000334414 ZNF462Q96JM2 2506 aa3.18□□□□□ -1.9
PTPRB-202ENST00000334414 KRTAP11-1Q8IUC1 163 aa3.18□□□□□ -1.9
PTPRB-202ENST00000334414 F8P00451 2351 aa3.18□□□□□ -1.9
PTPRB-202ENST00000334414 TLN1Q9Y490 2541 aaKnown RBP3.16□□□□□ -1.9
PTPRB-202ENST00000334414 TNP1P09430 55 aa3.15□□□□□ -1.9
PTPRB-202ENST00000334414 TLN2Q9Y4G6 2542 aa3.15□□□□□ -1.9
PTPRB-202ENST00000334414 PIEZO1Q92508 2521 aa3.15□□□□□ -1.9
PTPRB-202ENST00000334414 TTC28Q96AY4 2481 aa3.13□□□□□ -1.91
PTPRB-202ENST00000334414 Q5VSD8 79 aa3.12□□□□□ -1.91
PTPRB-202ENST00000334414 KRTAP13-1Q8IUC0 172 aa3.12□□□□□ -1.91
PTPRB-202ENST00000334414 ZFYVE26Q68DK2 2539 aa3.12□□□□□ -1.91
PTPRB-202ENST00000334414 KRTAP1-5Q9BYS1 174 aa3.11□□□□□ -1.91
PTPRB-202ENST00000334414 PIEZO2Q9H5I5 2752 aa3.11□□□□□ -1.91
PTPRB-202ENST00000334414 IGF2RP11717 2491 aa3.1□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 123.4 ms