RNA–Protein interactions for RNA: ENST00000328736.7

PTPN21-201, Transcript of protein tyrosine phosphatase, non-receptor type 21, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPN21, Length 6,089 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN21-201ENST00000328736 DOPEY1Q5JWR5 2465 aa10.11□□□□□ -0.79
PTPN21-201ENST00000328736 MYO9AB2RTY4 2548 aa10.1□□□□□ -0.79
PTPN21-201ENST00000328736 LRRK2Q5S007 2527 aa10.1□□□□□ -0.79
PTPN21-201ENST00000328736 KRTAP10-3P60369 221 aa10.1□□□□□ -0.79
PTPN21-201ENST00000328736 Q8N377 158 aa10.1□□□□□ -0.79
PTPN21-201ENST00000328736 C9orf163Q8N9P6 203 aa10.1□□□□□ -0.79
PTPN21-201ENST00000328736 SMR3BP02814 79 aaPredicted RBP10.09□□□□□ -0.79
PTPN21-201ENST00000328736 ABCA12Q86UK0 2595 aa10.08□□□□□ -0.8
PTPN21-201ENST00000328736 JMJD1CQ15652 2540 aa10.08□□□□□ -0.8
PTPN21-201ENST00000328736 A0A0G2JQZ4 141 aa10.06□□□□□ -0.8
PTPN21-201ENST00000328736 A0A1W2PNN7 141 aa10.06□□□□□ -0.8
PTPN21-201ENST00000328736 FN1P02751 2386 aaKnown RBP10.06□□□□□ -0.8
PTPN21-201ENST00000328736 PIEZO1Q92508 2521 aa10.06□□□□□ -0.8
PTPN21-201ENST00000328736 CDC42SE1Q9NRR8 79 aa10.05□□□□□ -0.8
PTPN21-201ENST00000328736 ANKRD11Q6UB99 2663 aaPredicted RBP10.04□□□□□ -0.8
PTPN21-201ENST00000328736 KLKP1Q107X0 134 aa10.04□□□□□ -0.8
PTPN21-201ENST00000328736 SPRR4Q96PI1 79 aa10.03□□□□□ -0.8
PTPN21-201ENST00000328736 TLN2Q9Y4G6 2542 aa10.03□□□□□ -0.8
PTPN21-201ENST00000328736 LINC00612Q8N6U2 182 aa10.03□□□□□ -0.8
PTPN21-201ENST00000328736 LINC01554Q52M75 96 aa10.02□□□□□ -0.81
PTPN21-201ENST00000328736 PSORS1C2Q9UIG4 136 aa10.02□□□□□ -0.81
PTPN21-201ENST00000328736 CEP295Q9C0D2 2601 aa10.01□□□□□ -0.81
PTPN21-201ENST00000328736 C5orf42Q9H799 3197 aa10.01□□□□□ -0.81
PTPN21-201ENST00000328736 FAM104AQ969W3 186 aa10.01□□□□□ -0.81
PTPN21-201ENST00000328736 CNBPP62633 177 aaKnown RBP10□□□□□ -0.81
PTPN21-201ENST00000328736 ZNF575Q86XF7 245 aa10□□□□□ -0.81
PTPN21-201ENST00000328736 ANAPC11Q9NYG5 84 aa9.99□□□□□ -0.81
PTPN21-201ENST00000328736 GIG44P09565 113 aaPredicted RBP9.99□□□□□ -0.81
PTPN21-201ENST00000328736 CEP350Q5VT06 3117 aa9.98□□□□□ -0.81
PTPN21-201ENST00000328736 USP9XQ93008 2570 aaPredicted RBP9.98□□□□□ -0.81
PTPN21-201ENST00000328736 A0A0D9SG42 100 aa9.97□□□□□ -0.81
PTPN21-201ENST00000328736 PCNTO95613 3336 aa9.97□□□□□ -0.81
PTPN21-201ENST00000328736 IGLV5-48A0A075B6I7 105 aa9.96□□□□□ -0.81
PTPN21-201ENST00000328736 A0A096LNT2 108 aa9.96□□□□□ -0.81
PTPN21-201ENST00000328736 ZNF462Q96JM2 2506 aa9.96□□□□□ -0.82
PTPN21-201ENST00000328736 SPANXA2-OT1Q8N9U9 137 aa9.96□□□□□ -0.82
PTPN21-201ENST00000328736 SETD2Q9BYW2 2564 aaPredicted RBP9.94□□□□□ -0.82
PTPN21-201ENST00000328736 ZFYVE26Q68DK2 2539 aa9.93□□□□□ -0.82
PTPN21-201ENST00000328736 Q8N1X5 172 aa9.93□□□□□ -0.82
PTPN21-201ENST00000328736 Q6ZSA8 131 aa9.92□□□□□ -0.82
PTPN21-201ENST00000328736 CASC10Q5T4H9 136 aa9.91□□□□□ -0.82
PTPN21-201ENST00000328736 ANKRD17O75179 2603 aaKnown RBP9.91□□□□□ -0.82
PTPN21-201ENST00000328736 CHD8Q9HCK8 2581 aa9.9□□□□□ -0.82
PTPN21-201ENST00000328736 LCA10Q71F78 164 aa9.9□□□□□ -0.82
PTPN21-201ENST00000328736 KTN1-AS1Q86SY8 53 aa9.9□□□□□ -0.82
PTPN21-201ENST00000328736 LUZP6Q538Z0 58 aa9.9□□□□□ -0.83
PTPN21-201ENST00000328736 POLQO75417 2590 aa9.89□□□□□ -0.83
PTPN21-201ENST00000328736 CD164Q04900 197 aa9.89□□□□□ -0.83
PTPN21-201ENST00000328736 H7BZZ5 65 aa9.88□□□□□ -0.83
PTPN21-201ENST00000328736 A0A1W2PNM2 257 aa9.87□□□□□ -0.83
PTPN21-201ENST00000328736 SPTBN4Q9H254 2564 aa9.86□□□□□ -0.83
PTPN21-201ENST00000328736 LINC00483Q53H64 154 aa9.84□□□□□ -0.83
PTPN21-201ENST00000328736 USP9YO00507 2555 aaPredicted RBP9.83□□□□□ -0.84
PTPN21-201ENST00000328736 IGLV7-46A0A075B6I9 117 aa9.82□□□□□ -0.84
PTPN21-201ENST00000328736 CAMK2N1Q7Z7J9 78 aa9.82□□□□□ -0.84
PTPN21-201ENST00000328736 KRTAP1-3Q8IUG1 177 aa9.82□□□□□ -0.84
PTPN21-201ENST00000328736 PRR26Q8N8Z3 221 aa9.79□□□□□ -0.84
PTPN21-201ENST00000328736 M0R2T5 61 aa9.78□□□□□ -0.84
PTPN21-201ENST00000328736 Q1T7F1 81 aa9.77□□□□□ -0.85
PTPN21-201ENST00000328736 BPTFQ12830 3046 aa9.76□□□□□ -0.85
PTPN21-201ENST00000328736 PKD1L2Q7Z442 2459 aa9.76□□□□□ -0.85
PTPN21-201ENST00000328736 ACANP16112 2415 aa9.75□□□□□ -0.85
PTPN21-201ENST00000328736 MTORP42345 2549 aa9.75□□□□□ -0.85
PTPN21-201ENST00000328736 TNP2Q05952 138 aa9.74□□□□□ -0.85
PTPN21-201ENST00000328736 KRTAP1-1Q07627 177 aa9.73□□□□□ -0.85
PTPN21-201ENST00000328736 FAM229BQ4G0N7 80 aa9.73□□□□□ -0.85
PTPN21-201ENST00000328736 A0A1B0GU33 70 aa9.72□□□□□ -0.85
PTPN21-201ENST00000328736 HRES1P13985 223 aa9.7□□□□□ -0.86
PTPN21-201ENST00000328736 CHD7Q9P2D1 2997 aa9.67□□□□□ -0.86
PTPN21-201ENST00000328736 S4R3F8 94 aa9.66□□□□□ -0.86
PTPN21-201ENST00000328736 OCR1Q9BZK8 76 aa9.65□□□□□ -0.86
PTPN21-201ENST00000328736 CSAG1Q6PB30 78 aa9.65□□□□□ -0.87
PTPN21-201ENST00000328736 MKI67P46013 3256 aaKnown RBP9.64□□□□□ -0.87
PTPN21-201ENST00000328736 PRRC2CQ9Y520 2896 aaKnown RBP9.64□□□□□ -0.87
PTPN21-201ENST00000328736 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.64□□□□□ -0.87
PTPN21-201ENST00000328736 ZCCHC13Q8WW36 166 aaKnown RBP9.64□□□□□ -0.87
PTPN21-201ENST00000328736 F8P00451 2351 aa9.63□□□□□ -0.87
PTPN21-201ENST00000328736 DMAC1Q96GE9 116 aa9.61□□□□□ -0.87
PTPN21-201ENST00000328736 FASNP49327 2511 aaKnown RBP9.59□□□□□ -0.87
PTPN21-201ENST00000328736 PLAC8Q9NZF1 115 aa9.59□□□□□ -0.87
PTPN21-201ENST00000328736 Q75L30 129 aa9.57□□□□□ -0.88
PTPN21-201ENST00000328736 HTTP42858 3142 aa9.53□□□□□ -0.88
PTPN21-201ENST00000328736 MMP24-AS1A0A0U1RRL7 71 aa9.52□□□□□ -0.89
PTPN21-201ENST00000328736 BRCA2P51587 3418 aa9.52□□□□□ -0.89
PTPN21-201ENST00000328736 SEC61BP60468 96 aaKnown RBP9.52□□□□□ -0.89
PTPN21-201ENST00000328736 LINC01558Q9Y6Z2 57 aa9.5□□□□□ -0.89
PTPN21-201ENST00000328736 Q8NDZ9 215 aa9.47□□□□□ -0.89
PTPN21-201ENST00000328736 WIPF1O43516 503 aa9.47□□□□□ -0.89
PTPN21-201ENST00000328736 R4GN34 69 aa9.47□□□□□ -0.89
PTPN21-201ENST00000328736 LAMA3Q16787 3333 aa9.46□□□□□ -0.89
PTPN21-201ENST00000328736 Q8N9P0 234 aaPredicted RBP9.45□□□□□ -0.9
PTPN21-201ENST00000328736 Q5W150 140 aa9.44□□□□□ -0.9
PTPN21-201ENST00000328736 SPRR1AP35321 89 aa9.43□□□□□ -0.9
PTPN21-201ENST00000328736 A0A0A0MQY5 61 aa9.42□□□□□ -0.9
PTPN21-201ENST00000328736 SPINK7P58062 85 aa9.42□□□□□ -0.9
PTPN21-201ENST00000328736 CHD9Q3L8U1 2897 aa9.4□□□□□ -0.9
PTPN21-201ENST00000328736 SPRR1BP22528 89 aa9.4□□□□□ -0.9
PTPN21-201ENST00000328736 Q5VSD8 79 aa9.39□□□□□ -0.91
PTPN21-201ENST00000328736 CFAP54Q96N23 3096 aa9.38□□□□□ -0.91
PTPN21-201ENST00000328736 RANBP2P49792 3224 aaKnown RBP9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms