RNA–Protein interactions for RNA: ENST00000309602.4

LRFN4-201, Transcript of leucine rich repeat and fibronectin type III domain containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRFN4, Length 2,431 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN4-201ENST00000309602 NKAPP1Q8N9T2 125 aa12.88□□□□□ -0.35
LRFN4-201ENST00000309602 C7orf33Q8WU49 177 aa12.87□□□□□ -0.35
LRFN4-201ENST00000309602 TLX1NBP0CAT3 122 aa12.87□□□□□ -0.35
LRFN4-201ENST00000309602 COX7CP15954 63 aa12.86□□□□□ -0.35
LRFN4-201ENST00000309602 PDE6GP18545 87 aa12.86□□□□□ -0.35
LRFN4-201ENST00000309602 KCNQ1DNQ9H478 68 aa12.86□□□□□ -0.35
LRFN4-201ENST00000309602 TRBV7-4A0A0J9YYF1 115 aa12.85□□□□□ -0.35
LRFN4-201ENST00000309602 GHRHP01286 108 aa12.85□□□□□ -0.35
LRFN4-201ENST00000309602 J3KT08 172 aa12.84□□□□□ -0.35
LRFN4-201ENST00000309602 FAM19A1Q7Z5A9 133 aa12.84□□□□□ -0.35
LRFN4-201ENST00000309602 FAM168BA1KXE4 195 aa12.82□□□□□ -0.36
LRFN4-201ENST00000309602 Q6ZVQ6 151 aa12.81□□□□□ -0.36
LRFN4-201ENST00000309602 PLA2G2DQ9UNK4 145 aa12.81□□□□□ -0.36
LRFN4-201ENST00000309602 RMI2Q96E14 147 aa12.81□□□□□ -0.36
LRFN4-201ENST00000309602 UPK3BQ9BT76 320 aa12.8□□□□□ -0.36
LRFN4-201ENST00000309602 RPL37AP8A6NKH3 93 aa12.78□□□□□ -0.36
LRFN4-201ENST00000309602 LINC01547P58512 204 aaPredicted RBP12.78□□□□□ -0.36
LRFN4-201ENST00000309602 CYSTM1Q9H1C7 97 aa12.78□□□□□ -0.36
LRFN4-201ENST00000309602 KRTAP7-1Q8IUC3 87 aa12.78□□□□□ -0.36
LRFN4-201ENST00000309602 IGLV5-37A0A075B6J1 123 aa12.77□□□□□ -0.37
LRFN4-201ENST00000309602 HAMPP81172 84 aa12.77□□□□□ -0.37
LRFN4-201ENST00000309602 SERP2Q8N6R1 65 aa12.76□□□□□ -0.37
LRFN4-201ENST00000309602 DNHD1Q96M86 4753 aa12.76□□□□□ -0.37
LRFN4-201ENST00000309602 IGLV1-50A0A075B6I6 118 aa12.74□□□□□ -0.37
LRFN4-201ENST00000309602 CRYGAP11844 174 aa12.74□□□□□ -0.37
LRFN4-201ENST00000309602 RPS28P62857 69 aaKnown RBP12.74□□□□□ -0.37
LRFN4-201ENST00000309602 KRTAP4-16G5E9R7 235 aaPredicted RBP12.73□□□□□ -0.37
LRFN4-201ENST00000309602 DEFB105AQ8NG35 78 aa12.73□□□□□ -0.37
LRFN4-201ENST00000309602 PRYO14603 147 aa12.72□□□□□ -0.37
LRFN4-201ENST00000309602 Q6ZRX8 168 aa12.72□□□□□ -0.37
LRFN4-201ENST00000309602 Q8N377 158 aa12.72□□□□□ -0.37
LRFN4-201ENST00000309602 KRTAP1-5Q9BYS1 174 aa12.71□□□□□ -0.37
LRFN4-201ENST00000309602 SPRR1AP35321 89 aa12.71□□□□□ -0.38
LRFN4-201ENST00000309602 Q9BRP9 147 aa12.71□□□□□ -0.38
LRFN4-201ENST00000309602 OXTP01178 125 aa12.7□□□□□ -0.38
LRFN4-201ENST00000309602 DHRS4-AS1Q9P1J3 65 aa12.69□□□□□ -0.38
LRFN4-201ENST00000309602 CXCL6P80162 114 aa12.69□□□□□ -0.38
LRFN4-201ENST00000309602 ETDCA0A1B0GVM5 59 aa12.68□□□□□ -0.38
LRFN4-201ENST00000309602 MRPL55Q7Z7F7 128 aaKnown RBP12.68□□□□□ -0.38
LRFN4-201ENST00000309602 STAB2Q8WWQ8 2551 aa12.67□□□□□ -0.38
LRFN4-201ENST00000309602 SCXQ7RTU7 201 aa12.67□□□□□ -0.38
LRFN4-201ENST00000309602 DPH3Q96FX2 82 aa12.66□□□□□ -0.38
LRFN4-201ENST00000309602 COL7A1Q02388 2944 aa12.66□□□□□ -0.38
LRFN4-201ENST00000309602 DNAH10Q8IVF4 4471 aa12.65□□□□□ -0.38
LRFN4-201ENST00000309602 LYSTQ99698 3801 aa12.64□□□□□ -0.39
LRFN4-201ENST00000309602 C4orf26Q17RF5 130 aa12.64□□□□□ -0.39
LRFN4-201ENST00000309602 DNAH9Q9NYC9 4486 aa12.64□□□□□ -0.39
LRFN4-201ENST00000309602 ST20-AS1Q8NBB2 130 aa12.63□□□□□ -0.39
LRFN4-201ENST00000309602 IGLV5-48A0A075B6I7 105 aa12.63□□□□□ -0.39
LRFN4-201ENST00000309602 ERC2-IT1O76042 136 aa12.61□□□□□ -0.39
LRFN4-201ENST00000309602 APLNQ9ULZ1 77 aa12.61□□□□□ -0.39
LRFN4-201ENST00000309602 Q5XG85 94 aa12.6□□□□□ -0.39
LRFN4-201ENST00000309602 UBE2DNLQ8IWF7 75 aa12.6□□□□□ -0.39
LRFN4-201ENST00000309602 A0A096LNI7 61 aa12.59□□□□□ -0.39
LRFN4-201ENST00000309602 TMEM258P61165 79 aa12.59□□□□□ -0.39
LRFN4-201ENST00000309602 HRCT1Q6UXD1 115 aa12.59□□□□□ -0.39
LRFN4-201ENST00000309602 C3orf84H3BNL1 204 aa12.58□□□□□ -0.4
LRFN4-201ENST00000309602 PSCAO43653 123 aa12.58□□□□□ -0.4
LRFN4-201ENST00000309602 REG3GQ6UW15 175 aa12.58□□□□□ -0.4
LRFN4-201ENST00000309602 IGKV2-24A0A0C4DH68 120 aa12.57□□□□□ -0.4
LRFN4-201ENST00000309602 CNBPP62633 177 aaKnown RBP12.57□□□□□ -0.4
LRFN4-201ENST00000309602 UBE2BP63146 152 aa12.57□□□□□ -0.4
LRFN4-201ENST00000309602 TNP2Q05952 138 aa12.57□□□□□ -0.4
LRFN4-201ENST00000309602 BCE1O60756 84 aa12.56□□□□□ -0.4
LRFN4-201ENST00000309602 C16orf90A8MZG2 172 aa12.56□□□□□ -0.4
LRFN4-201ENST00000309602 NREPQ16612 68 aa12.56□□□□□ -0.4
LRFN4-201ENST00000309602 A0A1W2PNN7 141 aa12.54□□□□□ -0.4
LRFN4-201ENST00000309602 DYNC2H1Q8NCM8 4307 aaKnown RBP12.54□□□□□ -0.4
LRFN4-201ENST00000309602 A0A1W2PNM2 257 aa12.53□□□□□ -0.4
LRFN4-201ENST00000309602 IGLV2-33A0A075B6J2 118 aaPredicted RBP12.53□□□□□ -0.4
LRFN4-201ENST00000309602 TRAV7A0A075B6U4 112 aa12.53□□□□□ -0.4
LRFN4-201ENST00000309602 Q8N9L7 120 aa12.53□□□□□ -0.4
LRFN4-201ENST00000309602 C1orf137Q5JT78 98 aa12.52□□□□□ -0.4
LRFN4-201ENST00000309602 B9D2Q9BPU9 175 aa12.52□□□□□ -0.4
LRFN4-201ENST00000309602 C20orf197Q8N268 126 aa12.51□□□□□ -0.41
LRFN4-201ENST00000309602 FUSP35637 526 aaKnown RBP eCLIP12.5□□□□□ -0.41
LRFN4-201ENST00000309602 MEGF8Q7Z7M0 2845 aa12.5□□□□□ -0.41
LRFN4-201ENST00000309602 PRKDCP78527 4128 aaKnown RBP12.5□□□□□ -0.41
LRFN4-201ENST00000309602 IGKV4-1P06312 121 aa12.49□□□□□ -0.41
LRFN4-201ENST00000309602 BPY2O14599 106 aa12.48□□□□□ -0.41
LRFN4-201ENST00000309602 SMIM29Q86T20 159 aa12.47□□□□□ -0.41
LRFN4-201ENST00000309602 Q8NBF4 154 aa12.47□□□□□ -0.41
LRFN4-201ENST00000309602 PRLHP81277 87 aa12.47□□□□□ -0.41
LRFN4-201ENST00000309602 CSMD3Q7Z407 3707 aa12.47□□□□□ -0.41
LRFN4-201ENST00000309602 DNAH7Q8WXX0 4024 aa12.46□□□□□ -0.41
LRFN4-201ENST00000309602 CHTF8P0CG12 524 aa12.46□□□□□ -0.41
LRFN4-201ENST00000309602 C14orf177Q52M58 125 aa12.46□□□□□ -0.41
LRFN4-201ENST00000309602 A0A1B0GW54 56 aa12.45□□□□□ -0.42
LRFN4-201ENST00000309602 TENM2Q9NT68 2774 aa12.45□□□□□ -0.42
LRFN4-201ENST00000309602 PLECQ15149 4684 aaKnown RBP12.44□□□□□ -0.42
LRFN4-201ENST00000309602 SPRR4Q96PI1 79 aa12.43□□□□□ -0.42
LRFN4-201ENST00000309602 KRTAP11-1Q8IUC1 163 aa12.42□□□□□ -0.42
LRFN4-201ENST00000309602 PHF5AQ7RTV0 110 aaKnown RBP12.42□□□□□ -0.42
LRFN4-201ENST00000309602 LRCOL1A6NCL2 159 aa12.41□□□□□ -0.42
LRFN4-201ENST00000309602 NBDYA0A0U1RRE5 68 aa12.41□□□□□ -0.42
LRFN4-201ENST00000309602 LINC00476Q8WZB0 136 aa12.41□□□□□ -0.42
LRFN4-201ENST00000309602 HIGD2AQ9BW72 106 aa12.4□□□□□ -0.42
LRFN4-201ENST00000309602 A0A0G2JQZ4 141 aa12.39□□□□□ -0.43
LRFN4-201ENST00000309602 C9orf163Q8N9P6 203 aa12.39□□□□□ -0.43
LRFN4-201ENST00000309602 F8WEM9 126 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms