RNA–Protein interactions for RNA: ENST00000309469.8

ATG4D-201, Transcript of autophagy related 4D cysteine peptidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATG4D, Length 1,949 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-201ENST00000309469 C16orf90A8MZG2 172 aa13.62□□□□□ -0.23
ATG4D-201ENST00000309469 FAM19A5Q7Z5A7 132 aaPredicted RBP13.62□□□□□ -0.23
ATG4D-201ENST00000309469 A0A096LNI7 61 aa13.62□□□□□ -0.23
ATG4D-201ENST00000309469 LINC00528Q8N1L1 170 aa13.61□□□□□ -0.23
ATG4D-201ENST00000309469 IGLV1-50A0A075B6I6 118 aa13.6□□□□□ -0.23
ATG4D-201ENST00000309469 JMJD7-PLA2G4BH0Y9G9 81 aa13.6□□□□□ -0.23
ATG4D-201ENST00000309469 Q6ZQY7 126 aa13.6□□□□□ -0.23
ATG4D-201ENST00000309469 RPL37AP8A6NKH3 93 aa13.6□□□□□ -0.23
ATG4D-201ENST00000309469 FBN3Q75N90 2809 aa13.59□□□□□ -0.23
ATG4D-201ENST00000309469 MRPL55Q7Z7F7 128 aaKnown RBP13.59□□□□□ -0.23
ATG4D-201ENST00000309469 IGKV2-24A0A0C4DH68 120 aa13.58□□□□□ -0.24
ATG4D-201ENST00000309469 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP13.58□□□□□ -0.24
ATG4D-201ENST00000309469 PRYO14603 147 aa13.57□□□□□ -0.24
ATG4D-201ENST00000309469 H3BQ85 93 aa13.56□□□□□ -0.24
ATG4D-201ENST00000309469 Q6ZR54 194 aa13.56□□□□□ -0.24
ATG4D-201ENST00000309469 C9orf163Q8N9P6 203 aa13.56□□□□□ -0.24
ATG4D-201ENST00000309469 ANAPC13Q9BS18 74 aa13.56□□□□□ -0.24
ATG4D-201ENST00000309469 SMCR5Q8TEV8 140 aa13.54□□□□□ -0.24
ATG4D-201ENST00000309469 SPRR1AP35321 89 aa13.54□□□□□ -0.24
ATG4D-201ENST00000309469 SDIM1Q6ZPB5 146 aa13.54□□□□□ -0.24
ATG4D-201ENST00000309469 A0A1W2PNN7 141 aa13.53□□□□□ -0.24
ATG4D-201ENST00000309469 KRTAP4-16G5E9R7 235 aaPredicted RBP13.52□□□□□ -0.24
ATG4D-201ENST00000309469 GHRHP01286 108 aa13.52□□□□□ -0.25
ATG4D-201ENST00000309469 NDUFV3P56181 108 aaKnown RBP13.52□□□□□ -0.25
ATG4D-201ENST00000309469 PKIGQ9Y2B9 76 aa13.52□□□□□ -0.25
ATG4D-201ENST00000309469 CCKP06307 115 aa13.51□□□□□ -0.25
ATG4D-201ENST00000309469 LINC00643Q86TS7 51 aa13.51□□□□□ -0.25
ATG4D-201ENST00000309469 WWC2-AS2Q96NR7 200 aa13.51□□□□□ -0.25
ATG4D-201ENST00000309469 LAMTOR3Q9UHA4 124 aa13.51□□□□□ -0.25
ATG4D-201ENST00000309469 A0A087WTM6 91 aa13.5□□□□□ -0.25
ATG4D-201ENST00000309469 B5MCH6 92 aa13.5□□□□□ -0.25
ATG4D-201ENST00000309469 TRBV7-7A0A0K0K1E9 115 aa13.49□□□□□ -0.25
ATG4D-201ENST00000309469 CHTF8P0CG12 524 aa13.49□□□□□ -0.25
ATG4D-201ENST00000309469 Q6ZRX8 168 aa13.49□□□□□ -0.25
ATG4D-201ENST00000309469 ETDCA0A1B0GVM5 59 aa13.49□□□□□ -0.25
ATG4D-201ENST00000309469 LY6G6CO95867 125 aa13.47□□□□□ -0.25
ATG4D-201ENST00000309469 RBM3P98179 157 aaKnown RBP13.47□□□□□ -0.25
ATG4D-201ENST00000309469 IMUPQ9GZP8 106 aa13.47□□□□□ -0.25
ATG4D-201ENST00000309469 DHRS4-AS1Q9P1J3 65 aa13.47□□□□□ -0.25
ATG4D-201ENST00000309469 REG3GQ6UW15 175 aa13.46□□□□□ -0.25
ATG4D-201ENST00000309469 LINC00846Q9NV44 126 aa13.45□□□□□ -0.26
ATG4D-201ENST00000309469 Q9BRP9 147 aa13.44□□□□□ -0.26
ATG4D-201ENST00000309469 LINC00474Q9P2X8 69 aa13.44□□□□□ -0.26
ATG4D-201ENST00000309469 C1orf134Q5TEV5 83 aa13.43□□□□□ -0.26
ATG4D-201ENST00000309469 LOC110117498A0A087WWA1 95 aa13.42□□□□□ -0.26
ATG4D-201ENST00000309469 LINC00476Q8WZB0 136 aa13.41□□□□□ -0.26
ATG4D-201ENST00000309469 Q6ZQT0 140 aa13.41□□□□□ -0.26
ATG4D-201ENST00000309469 DSCR8Q96T75 97 aa13.41□□□□□ -0.26
ATG4D-201ENST00000309469 PHF5AQ7RTV0 110 aaKnown RBP13.39□□□□□ -0.27
ATG4D-201ENST00000309469 PANO1I0J062 215 aa13.38□□□□□ -0.27
ATG4D-201ENST00000309469 DEFB105AQ8NG35 78 aa13.37□□□□□ -0.27
ATG4D-201ENST00000309469 PDE6GP18545 87 aa13.37□□□□□ -0.27
ATG4D-201ENST00000309469 UBE2BP63146 152 aa13.37□□□□□ -0.27
ATG4D-201ENST00000309469 Q8N377 158 aa13.36□□□□□ -0.27
ATG4D-201ENST00000309469 RTL8CO15255 209 aa13.35□□□□□ -0.27
ATG4D-201ENST00000309469 LINC01547P58512 204 aaPredicted RBP13.35□□□□□ -0.27
ATG4D-201ENST00000309469 DPH3Q96FX2 82 aa13.35□□□□□ -0.27
ATG4D-201ENST00000309469 TGP01266 2768 aa13.35□□□□□ -0.27
ATG4D-201ENST00000309469 DNAH2Q9P225 4427 aa13.35□□□□□ -0.27
ATG4D-201ENST00000309469 ERC2-IT1O76042 136 aa13.34□□□□□ -0.27
ATG4D-201ENST00000309469 FUSP35637 526 aaKnown RBP eCLIP13.34□□□□□ -0.27
ATG4D-201ENST00000309469 Q6JHZ5 121 aa13.34□□□□□ -0.27
ATG4D-201ENST00000309469 KRTAP11-1Q8IUC1 163 aa13.34□□□□□ -0.27
ATG4D-201ENST00000309469 KMT2AQ03164 3969 aa13.33□□□□□ -0.28
ATG4D-201ENST00000309469 C3orf84H3BNL1 204 aa13.33□□□□□ -0.28
ATG4D-201ENST00000309469 FAM19A1Q7Z5A9 133 aa13.33□□□□□ -0.28
ATG4D-201ENST00000309469 SPACA4Q8TDM5 124 aa13.33□□□□□ -0.28
ATG4D-201ENST00000309469 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP13.33□□□□□ -0.28
ATG4D-201ENST00000309469 ST20-AS1Q8NBB2 130 aa13.33□□□□□ -0.28
ATG4D-201ENST00000309469 TRBV7-4A0A0J9YYF1 115 aa13.32□□□□□ -0.28
ATG4D-201ENST00000309469 IGLV5-48A0A075B6I7 105 aa13.31□□□□□ -0.28
ATG4D-201ENST00000309469 PRLHP81277 87 aa13.3□□□□□ -0.28
ATG4D-201ENST00000309469 IGKV3D-7A0A0C4DH55 119 aa13.29□□□□□ -0.28
ATG4D-201ENST00000309469 EPM2AB3EWF7 344 aa13.29□□□□□ -0.28
ATG4D-201ENST00000309469 UBL5Q9BZL1 73 aa13.29□□□□□ -0.28
ATG4D-201ENST00000309469 IGLV5-52A0A0A0MRZ9 124 aa13.27□□□□□ -0.28
ATG4D-201ENST00000309469 CCDC179H3BU77 68 aa13.27□□□□□ -0.28
ATG4D-201ENST00000309469 TNP2Q05952 138 aa13.26□□□□□ -0.29
ATG4D-201ENST00000309469 FAM236AA0A1B0GUQ0 79 aa13.25□□□□□ -0.29
ATG4D-201ENST00000309469 FAM236BA0A1B0GV22 79 aa13.25□□□□□ -0.29
ATG4D-201ENST00000309469 ATP5EP2Q5VTU8 51 aa13.24□□□□□ -0.29
ATG4D-201ENST00000309469 C3orf22Q8N5N4 141 aa13.24□□□□□ -0.29
ATG4D-201ENST00000309469 DNAH6Q9C0G6 4158 aa13.23□□□□□ -0.29
ATG4D-201ENST00000309469 DNAH17Q9UFH2 4485 aa13.23□□□□□ -0.29
ATG4D-201ENST00000309469 H0Y9J4 135 aa13.23□□□□□ -0.29
ATG4D-201ENST00000309469 HIGD2AQ9BW72 106 aa13.23□□□□□ -0.29
ATG4D-201ENST00000309469 ALMS1Q8TCU4 4167 aa13.22□□□□□ -0.29
ATG4D-201ENST00000309469 BCE1O60756 84 aa13.19□□□□□ -0.3
ATG4D-201ENST00000309469 HECTD4Q9Y4D8 3996 aa13.18□□□□□ -0.3
ATG4D-201ENST00000309469 UBE2AP49459 152 aa13.18□□□□□ -0.3
ATG4D-201ENST00000309469 PLAC8Q9NZF1 115 aa13.18□□□□□ -0.3
ATG4D-201ENST00000309469 SS18L2Q9UHA2 77 aa13.18□□□□□ -0.3
ATG4D-201ENST00000309469 Q6ZVQ6 151 aa13.17□□□□□ -0.3
ATG4D-201ENST00000309469 HIST1H4AP62805 103 aaKnown RBP13.17□□□□□ -0.3
ATG4D-201ENST00000309469 SMIM29Q86T20 159 aa13.17□□□□□ -0.3
ATG4D-201ENST00000309469 KRTAP13-1Q8IUC0 172 aa13.13□□□□□ -0.31
ATG4D-201ENST00000309469 A0A087WVE0 104 aa13.13□□□□□ -0.31
ATG4D-201ENST00000309469 C1orf137Q5JT78 98 aa13.12□□□□□ -0.31
ATG4D-201ENST00000309469 UQCRQO14949 82 aa13.11□□□□□ -0.31
ATG4D-201ENST00000309469 KRTAP10-2P60368 255 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 135.1 ms