RNA–Protein interactions for RNA: ENST00000305364.8

TRIM35-201, Transcript of tripartite motif containing 35, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM35, Length 4,229 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35-201ENST00000305364 TRBV7-4A0A0J9YYF1 115 aa8.78□□□□□ -1
TRIM35-201ENST00000305364 EGFEM1PQ0D2K5 195 aa8.78□□□□□ -1
TRIM35-201ENST00000305364 C19orf73Q9NVV2 129 aa8.78□□□□□ -1
TRIM35-201ENST00000305364 C16orf95Q9H693 158 aa8.78□□□□□ -1
TRIM35-201ENST00000305364 Q6ZRU5 148 aa8.77□□□□□ -1.01
TRIM35-201ENST00000305364 SYCNQ0VAF6 134 aa8.77□□□□□ -1.01
TRIM35-201ENST00000305364 C1orf137Q5JT78 98 aa8.76□□□□□ -1.01
TRIM35-201ENST00000305364 WFDC13Q8IUB5 93 aa8.76□□□□□ -1.01
TRIM35-201ENST00000305364 CDK2AP2O75956 126 aa8.75□□□□□ -1.01
TRIM35-201ENST00000305364 KPRPQ5T749 579 aaPredicted RBP8.75□□□□□ -1.01
TRIM35-201ENST00000305364 CRYBG3Q68DQ2 2970 aa8.75□□□□□ -1.01
TRIM35-201ENST00000305364 CUBNO60494 3623 aa8.74□□□□□ -1.01
TRIM35-201ENST00000305364 FBN2P35556 2912 aa8.74□□□□□ -1.01
TRIM35-201ENST00000305364 WFDC10BQ8IUB3 73 aa8.74□□□□□ -1.01
TRIM35-201ENST00000305364 IGKV4-1P06312 121 aa8.73□□□□□ -1.01
TRIM35-201ENST00000305364 ERC2-IT1O76042 136 aa8.72□□□□□ -1.01
TRIM35-201ENST00000305364 SEC61GP60059 68 aa8.72□□□□□ -1.01
TRIM35-201ENST00000305364 VPREB1P12018 145 aa8.72□□□□□ -1.01
TRIM35-201ENST00000305364 DHRS4-AS1Q9P1J3 65 aa8.71□□□□□ -1.01
TRIM35-201ENST00000305364 SPTSSBQ8NFR3 76 aa8.71□□□□□ -1.02
TRIM35-201ENST00000305364 DEFB116Q30KQ4 102 aa8.7□□□□□ -1.02
TRIM35-201ENST00000305364 FAM229BQ4G0N7 80 aa8.69□□□□□ -1.02
TRIM35-201ENST00000305364 LINC00528Q8N1L1 170 aa8.69□□□□□ -1.02
TRIM35-201ENST00000305364 NF1P21359 2839 aa8.69□□□□□ -1.02
TRIM35-201ENST00000305364 GVQW2A0A096LPI5 108 aaPredicted RBP8.69□□□□□ -1.02
TRIM35-201ENST00000305364 LINC00612Q8N6U2 182 aa8.69□□□□□ -1.02
TRIM35-201ENST00000305364 MXRA5Q9NR99 2828 aa8.68□□□□□ -1.02
TRIM35-201ENST00000305364 LINC00208Q96KT6 92 aa8.68□□□□□ -1.02
TRIM35-201ENST00000305364 NDUFB1O75438 58 aa8.67□□□□□ -1.02
TRIM35-201ENST00000305364 IGKV2-24A0A0C4DH68 120 aa8.66□□□□□ -1.02
TRIM35-201ENST00000305364 OCR1Q9BZK8 76 aa8.66□□□□□ -1.02
TRIM35-201ENST00000305364 C7orf33Q8WU49 177 aa8.66□□□□□ -1.02
TRIM35-201ENST00000305364 UTP20O75691 2785 aaKnown RBP8.66□□□□□ -1.02
TRIM35-201ENST00000305364 PMAIP1Q13794 54 aa8.65□□□□□ -1.02
TRIM35-201ENST00000305364 C14orf177Q52M58 125 aa8.65□□□□□ -1.02
TRIM35-201ENST00000305364 EPM2AB3EWF7 344 aa8.65□□□□□ -1.02
TRIM35-201ENST00000305364 CHKB-CPT1BH3BT56 60 aa8.65□□□□□ -1.02
TRIM35-201ENST00000305364 Q6ZRP5 223 aa8.64□□□□□ -1.03
TRIM35-201ENST00000305364 BSNQ9UPA5 3926 aa8.64□□□□□ -1.03
TRIM35-201ENST00000305364 C1orf64Q8NEQ6 169 aa8.64□□□□□ -1.03
TRIM35-201ENST00000305364 PRR34Q9NV39 138 aa8.63□□□□□ -1.03
TRIM35-201ENST00000305364 HCG22E2RYF7 251 aa8.63□□□□□ -1.03
TRIM35-201ENST00000305364 A0A096LNI7 61 aa8.62□□□□□ -1.03
TRIM35-201ENST00000305364 UBE2AP49459 152 aa8.62□□□□□ -1.03
TRIM35-201ENST00000305364 ST20-AS1Q8NBB2 130 aa8.62□□□□□ -1.03
TRIM35-201ENST00000305364 Q8N377 158 aa8.62□□□□□ -1.03
TRIM35-201ENST00000305364 RETNQ9HD89 108 aa8.62□□□□□ -1.03
TRIM35-201ENST00000305364 APCP25054 2843 aa8.61□□□□□ -1.03
TRIM35-201ENST00000305364 Q8NBF4 154 aa8.61□□□□□ -1.03
TRIM35-201ENST00000305364 NSD1Q96L73 2696 aaPredicted RBP8.61□□□□□ -1.03
TRIM35-201ENST00000305364 CELSR2Q9HCU4 2923 aa8.61□□□□□ -1.03
TRIM35-201ENST00000305364 H0Y9J4 135 aa8.61□□□□□ -1.03
TRIM35-201ENST00000305364 K7EQZ3 153 aa8.61□□□□□ -1.03
TRIM35-201ENST00000305364 Q6ZTC4 211 aa8.6□□□□□ -1.03
TRIM35-201ENST00000305364 A0A087WSZ3 146 aa8.6□□□□□ -1.03
TRIM35-201ENST00000305364 F8WDY8 70 aa8.6□□□□□ -1.03
TRIM35-201ENST00000305364 Q8NAQ8 132 aa8.59□□□□□ -1.03
TRIM35-201ENST00000305364 PRR15LQ9BU68 103 aa8.58□□□□□ -1.04
TRIM35-201ENST00000305364 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.58□□□□□ -1.04
TRIM35-201ENST00000305364 Q6ZRX8 168 aa8.58□□□□□ -1.04
TRIM35-201ENST00000305364 MRPL55Q7Z7F7 128 aaKnown RBP8.58□□□□□ -1.04
TRIM35-201ENST00000305364 hDV103S1A0JD37 113 aa8.58□□□□□ -1.04
TRIM35-201ENST00000305364 A6NED7 52 aa8.58□□□□□ -1.04
TRIM35-201ENST00000305364 A8MUN3 132 aa8.58□□□□□ -1.04
TRIM35-201ENST00000305364 SERTAD4-AS1Q5TG53 156 aa8.58□□□□□ -1.04
TRIM35-201ENST00000305364 NDUFS5O43920 106 aa8.57□□□□□ -1.04
TRIM35-201ENST00000305364 B9D2Q9BPU9 175 aa8.57□□□□□ -1.04
TRIM35-201ENST00000305364 A0A1W2PNM2 257 aa8.56□□□□□ -1.04
TRIM35-201ENST00000305364 KCNQ1DNQ9H478 68 aa8.55□□□□□ -1.04
TRIM35-201ENST00000305364 TRAV22A0A0B4J277 110 aa8.55□□□□□ -1.04
TRIM35-201ENST00000305364 C15orf56Q8N910 161 aa8.55□□□□□ -1.04
TRIM35-201ENST00000305364 A0A1B0GW54 56 aa8.54□□□□□ -1.04
TRIM35-201ENST00000305364 H0Y9P7 68 aa8.54□□□□□ -1.04
TRIM35-201ENST00000305364 A0A0G2JQZ4 141 aa8.54□□□□□ -1.04
TRIM35-201ENST00000305364 A0A1W2PNN7 141 aa8.54□□□□□ -1.04
TRIM35-201ENST00000305364 NIPBLQ6KC79 2804 aaeCLIP8.54□□□□□ -1.04
TRIM35-201ENST00000305364 FAM168BA1KXE4 195 aa8.53□□□□□ -1.04
TRIM35-201ENST00000305364 CASC2Q6XLA1 102 aa8.53□□□□□ -1.04
TRIM35-201ENST00000305364 REG3GQ6UW15 175 aa8.52□□□□□ -1.05
TRIM35-201ENST00000305364 LINC00476Q8WZB0 136 aa8.52□□□□□ -1.05
TRIM35-201ENST00000305364 ZFHX3Q15911 3703 aa8.51□□□□□ -1.05
TRIM35-201ENST00000305364 IGLV5-48A0A075B6I7 105 aa8.51□□□□□ -1.05
TRIM35-201ENST00000305364 PRLHP81277 87 aa8.51□□□□□ -1.05
TRIM35-201ENST00000305364 RPL37AP61513 92 aaKnown RBP8.51□□□□□ -1.05
TRIM35-201ENST00000305364 KRTAP1-3Q8IUG1 177 aa8.48□□□□□ -1.05
TRIM35-201ENST00000305364 KRTAP10-3P60369 221 aa8.48□□□□□ -1.05
TRIM35-201ENST00000305364 PCOTHQ58A44 107 aa8.48□□□□□ -1.05
TRIM35-201ENST00000305364 HIVEP1P15822 2718 aa8.47□□□□□ -1.05
TRIM35-201ENST00000305364 DSCR10P59022 87 aa8.47□□□□□ -1.05
TRIM35-201ENST00000305364 LINC01556Q5JQF7 62 aa8.47□□□□□ -1.05
TRIM35-201ENST00000305364 PRR15Q8IV56 129 aa8.47□□□□□ -1.05
TRIM35-201ENST00000305364 Q9BRP9 147 aa8.47□□□□□ -1.05
TRIM35-201ENST00000305364 Q1T7F1 81 aa8.46□□□□□ -1.05
TRIM35-201ENST00000305364 KRTAP24-1Q3LI83 254 aa8.46□□□□□ -1.05
TRIM35-201ENST00000305364 LIMD2Q9BT23 127 aa8.46□□□□□ -1.05
TRIM35-201ENST00000305364 CSMD2Q7Z408 3487 aa8.46□□□□□ -1.06
TRIM35-201ENST00000305364 IGLV1-50A0A075B6I6 118 aa8.46□□□□□ -1.06
TRIM35-201ENST00000305364 LY6G6CO95867 125 aa8.44□□□□□ -1.06
TRIM35-201ENST00000305364 C4orf48Q5BLP8 95 aa8.44□□□□□ -1.06
TRIM35-201ENST00000305364 NUPR2A6NF83 97 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms