RNA–Protein interactions for RNA: ENST00000304778.11

LONRF3-201, Transcript of LON peptidase N-terminal domain and ring finger 3, humanhuman

TSL 1 (best) BASIC

Gene LONRF3, Length 2,989 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LONRF3-201ENST00000304778 TRBV7-4A0A0J9YYF1 115 aa10.81□□□□□ -0.68
LONRF3-201ENST00000304778 MGAM2Q2M2H8 2515 aa10.81□□□□□ -0.68
LONRF3-201ENST00000304778 ZNF561-AS1K7EIQ3 104 aa10.8□□□□□ -0.68
LONRF3-201ENST00000304778 Q6ZTC4 211 aa10.8□□□□□ -0.68
LONRF3-201ENST00000304778 KLK12Q9UKR0 248 aa10.8□□□□□ -0.68
LONRF3-201ENST00000304778 IGLV6-57P01721 117 aa10.79□□□□□ -0.68
LONRF3-201ENST00000304778 ATP5EP56381 51 aaPredicted RBP10.79□□□□□ -0.68
LONRF3-201ENST00000304778 CXCL6P80162 114 aa10.79□□□□□ -0.68
LONRF3-201ENST00000304778 PRB2P02812 416 aaPredicted RBP10.77□□□□□ -0.68
LONRF3-201ENST00000304778 NREPQ16612 68 aa10.77□□□□□ -0.69
LONRF3-201ENST00000304778 KPRPQ5T749 579 aaPredicted RBP10.77□□□□□ -0.69
LONRF3-201ENST00000304778 DNAH3Q8TD57 4116 aa10.77□□□□□ -0.69
LONRF3-201ENST00000304778 GVQW2A0A096LPI5 108 aaPredicted RBP10.77□□□□□ -0.69
LONRF3-201ENST00000304778 TMEM254Q8TBM7 123 aa10.77□□□□□ -0.69
LONRF3-201ENST00000304778 H3BNG1 76 aa10.74□□□□□ -0.69
LONRF3-201ENST00000304778 C6orf48Q9UBA6 75 aa10.74□□□□□ -0.69
LONRF3-201ENST00000304778 MDFIQ99750 246 aa10.73□□□□□ -0.69
LONRF3-201ENST00000304778 NBEAL1Q6ZS30 2694 aa10.73□□□□□ -0.69
LONRF3-201ENST00000304778 Q6ZQY7 126 aa10.73□□□□□ -0.69
LONRF3-201ENST00000304778 BPY2O14599 106 aa10.72□□□□□ -0.69
LONRF3-201ENST00000304778 TENM3Q9P273 2699 aa10.72□□□□□ -0.69
LONRF3-201ENST00000304778 WFDC10BQ8IUB3 73 aa10.72□□□□□ -0.69
LONRF3-201ENST00000304778 C11orf45Q8TAV5 145 aa10.71□□□□□ -0.69
LONRF3-201ENST00000304778 XAGE1AQ9HD64 81 aa10.7□□□□□ -0.7
LONRF3-201ENST00000304778 DIRC1Q969H9 104 aa10.7□□□□□ -0.7
LONRF3-201ENST00000304778 DEFB131BA0A096LNP1 70 aa10.69□□□□□ -0.7
LONRF3-201ENST00000304778 PDE6GP18545 87 aa10.69□□□□□ -0.7
LONRF3-201ENST00000304778 H3BQ85 93 aa10.69□□□□□ -0.7
LONRF3-201ENST00000304778 ESRGQ1W209 222 aa10.68□□□□□ -0.7
LONRF3-201ENST00000304778 Q8N9L7 120 aa10.68□□□□□ -0.7
LONRF3-201ENST00000304778 FUSP35637 526 aaKnown RBP eCLIP10.67□□□□□ -0.7
LONRF3-201ENST00000304778 PRYO14603 147 aa10.67□□□□□ -0.7
LONRF3-201ENST00000304778 ZNF73O43830 326 aaPredicted RBP10.66□□□□□ -0.7
LONRF3-201ENST00000304778 HIGD2BQ4VC39 106 aa10.65□□□□□ -0.7
LONRF3-201ENST00000304778 CAMK2N2Q96S95 79 aa10.65□□□□□ -0.7
LONRF3-201ENST00000304778 ERC2-IT1O76042 136 aa10.65□□□□□ -0.71
LONRF3-201ENST00000304778 K7EIL1 84 aa10.64□□□□□ -0.71
LONRF3-201ENST00000304778 COX7BP24311 80 aa10.64□□□□□ -0.71
LONRF3-201ENST00000304778 ELOF1P60002 83 aaKnown RBP10.64□□□□□ -0.71
LONRF3-201ENST00000304778 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP10.64□□□□□ -0.71
LONRF3-201ENST00000304778 VPREB1P12018 145 aa10.64□□□□□ -0.71
LONRF3-201ENST00000304778 KRTAP26-1Q6PEX3 210 aa10.64□□□□□ -0.71
LONRF3-201ENST00000304778 HIGD2AQ9BW72 106 aa10.62□□□□□ -0.71
LONRF3-201ENST00000304778 OCR1Q9BZK8 76 aa10.61□□□□□ -0.71
LONRF3-201ENST00000304778 Q6ZRU5 148 aa10.61□□□□□ -0.71
LONRF3-201ENST00000304778 LRCOL1A6NCL2 159 aa10.6□□□□□ -0.71
LONRF3-201ENST00000304778 C15orf56Q8N910 161 aa10.6□□□□□ -0.71
LONRF3-201ENST00000304778 M0R378 163 aa10.59□□□□□ -0.71
LONRF3-201ENST00000304778 IGKV4-1P06312 121 aa10.59□□□□□ -0.71
LONRF3-201ENST00000304778 LINC01556Q5JQF7 62 aa10.57□□□□□ -0.72
LONRF3-201ENST00000304778 PMAIP1Q13794 54 aa10.56□□□□□ -0.72
LONRF3-201ENST00000304778 HUWE1Q7Z6Z7 4374 aaKnown RBP10.56□□□□□ -0.72
LONRF3-201ENST00000304778 LINC00528Q8N1L1 170 aa10.55□□□□□ -0.72
LONRF3-201ENST00000304778 PRR15Q8IV56 129 aa10.55□□□□□ -0.72
LONRF3-201ENST00000304778 Q6ZRP5 223 aa10.53□□□□□ -0.72
LONRF3-201ENST00000304778 IGKV2D-24A0A075B6R9 120 aa10.53□□□□□ -0.72
LONRF3-201ENST00000304778 hDV103S1A0JD37 113 aa10.53□□□□□ -0.72
LONRF3-201ENST00000304778 LINC00588Q9Y4M8 146 aa10.52□□□□□ -0.73
LONRF3-201ENST00000304778 DNAH10OSP0CZ25 163 aa10.51□□□□□ -0.73
LONRF3-201ENST00000304778 C3orf84H3BNL1 204 aa10.5□□□□□ -0.73
LONRF3-201ENST00000304778 FAM30AQ9NZY2 134 aa10.5□□□□□ -0.73
LONRF3-201ENST00000304778 PSPHP1O15172 72 aa10.49□□□□□ -0.73
LONRF3-201ENST00000304778 SYCNQ0VAF6 134 aa10.49□□□□□ -0.73
LONRF3-201ENST00000304778 DEFB105AQ8NG35 78 aa10.48□□□□□ -0.73
LONRF3-201ENST00000304778 C1orf64Q8NEQ6 169 aa10.48□□□□□ -0.73
LONRF3-201ENST00000304778 Q1T7F1 81 aa10.47□□□□□ -0.73
LONRF3-201ENST00000304778 SMIM29Q86T20 159 aa10.46□□□□□ -0.73
LONRF3-201ENST00000304778 KCNQ1DNQ9H478 68 aa10.45□□□□□ -0.74
LONRF3-201ENST00000304778 NKAPP1Q8N9T2 125 aa10.45□□□□□ -0.74
LONRF3-201ENST00000304778 SERTAD4-AS1Q5TG53 156 aa10.44□□□□□ -0.74
LONRF3-201ENST00000304778 C7orf33Q8WU49 177 aa10.43□□□□□ -0.74
LONRF3-201ENST00000304778 TRAV22A0A0B4J277 110 aa10.41□□□□□ -0.74
LONRF3-201ENST00000304778 PRR4Q16378 134 aa10.41□□□□□ -0.74
LONRF3-201ENST00000304778 CASC10Q5T4H9 136 aa10.41□□□□□ -0.74
LONRF3-201ENST00000304778 TLX1NBP0CAT3 122 aa10.4□□□□□ -0.74
LONRF3-201ENST00000304778 COL7A1Q02388 2944 aa10.4□□□□□ -0.75
LONRF3-201ENST00000304778 STAB2Q8WWQ8 2551 aa10.39□□□□□ -0.75
LONRF3-201ENST00000304778 DNAH1Q9P2D7 4330 aa10.39□□□□□ -0.75
LONRF3-201ENST00000304778 Q8N377 158 aa10.38□□□□□ -0.75
LONRF3-201ENST00000304778 PLA2G2DQ9UNK4 145 aa10.38□□□□□ -0.75
LONRF3-201ENST00000304778 DNAH9Q9NYC9 4486 aa10.38□□□□□ -0.75
LONRF3-201ENST00000304778 DNHD1Q96M86 4753 aa10.38□□□□□ -0.75
LONRF3-201ENST00000304778 IGLV5-48A0A075B6I7 105 aa10.36□□□□□ -0.75
LONRF3-201ENST00000304778 LCE6AA0A183 80 aa10.36□□□□□ -0.75
LONRF3-201ENST00000304778 A8MU10 97 aa10.36□□□□□ -0.75
LONRF3-201ENST00000304778 Q6ZRX8 168 aa10.36□□□□□ -0.75
LONRF3-201ENST00000304778 DHRS4-AS1Q9P1J3 65 aa10.36□□□□□ -0.75
LONRF3-201ENST00000304778 A8MUN3 132 aa10.35□□□□□ -0.75
LONRF3-201ENST00000304778 ZCCHC13Q8WW36 166 aaKnown RBP10.35□□□□□ -0.75
LONRF3-201ENST00000304778 IGLV5-37A0A075B6J1 123 aa10.34□□□□□ -0.75
LONRF3-201ENST00000304778 KRTAP4-16G5E9R7 235 aaPredicted RBP10.34□□□□□ -0.75
LONRF3-201ENST00000304778 B9D2Q9BPU9 175 aa10.34□□□□□ -0.75
LONRF3-201ENST00000304778 RPL37AP8A6NKH3 93 aa10.33□□□□□ -0.76
LONRF3-201ENST00000304778 Q9BRP9 147 aa10.33□□□□□ -0.76
LONRF3-201ENST00000304778 IGLV1-50A0A075B6I6 118 aa10.33□□□□□ -0.76
LONRF3-201ENST00000304778 FAM168BA1KXE4 195 aa10.33□□□□□ -0.76
LONRF3-201ENST00000304778 A0A0G2JQZ4 141 aa10.32□□□□□ -0.76
LONRF3-201ENST00000304778 A0A1W2PNN7 141 aa10.32□□□□□ -0.76
LONRF3-201ENST00000304778 CSMD3Q7Z407 3707 aa10.32□□□□□ -0.76
LONRF3-201ENST00000304778 SPRR1AP35321 89 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms