RNA–Protein interactions for RNA: ENST00000289292.11

SHROOM4-201, Transcript of shroom family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHROOM4, Length 6,261 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4-201ENST00000289292 ANAPC11Q9NYG5 84 aa10.01□□□□□ -0.81
SHROOM4-201ENST00000289292 ANKRD11Q6UB99 2663 aaPredicted RBP10.01□□□□□ -0.81
SHROOM4-201ENST00000289292 C8orf17Q9NRJ1 99 aa10□□□□□ -0.81
SHROOM4-201ENST00000289292 MIR22HGQ0VDD5 57 aa10□□□□□ -0.81
SHROOM4-201ENST00000289292 CASC10Q5T4H9 136 aa10□□□□□ -0.81
SHROOM4-201ENST00000289292 UQCR11O14957 56 aa9.99□□□□□ -0.81
SHROOM4-201ENST00000289292 A0A096LNT2 108 aa9.98□□□□□ -0.81
SHROOM4-201ENST00000289292 A0A0C4DFX4 3053 aa9.97□□□□□ -0.81
SHROOM4-201ENST00000289292 A0A1W2PNM2 257 aa9.96□□□□□ -0.81
SHROOM4-201ENST00000289292 CEP295Q9C0D2 2601 aa9.96□□□□□ -0.81
SHROOM4-201ENST00000289292 MKI67P46013 3256 aaKnown RBP9.96□□□□□ -0.81
SHROOM4-201ENST00000289292 JMJD1CQ15652 2540 aa9.96□□□□□ -0.81
SHROOM4-201ENST00000289292 FAM104AQ969W3 186 aa9.96□□□□□ -0.82
SHROOM4-201ENST00000289292 ANKRD17O75179 2603 aaKnown RBP9.95□□□□□ -0.82
SHROOM4-201ENST00000289292 CYSTM1Q9H1C7 97 aa9.95□□□□□ -0.82
SHROOM4-201ENST00000289292 LINC00612Q8N6U2 182 aa9.94□□□□□ -0.82
SHROOM4-201ENST00000289292 A0A1B0GVX0 72 aa9.93□□□□□ -0.82
SHROOM4-201ENST00000289292 LCA10Q71F78 164 aa9.93□□□□□ -0.82
SHROOM4-201ENST00000289292 CHD7Q9P2D1 2997 aa9.92□□□□□ -0.82
SHROOM4-201ENST00000289292 FAM229AH3BQW9 127 aa9.91□□□□□ -0.82
SHROOM4-201ENST00000289292 FAM229BQ4G0N7 80 aa9.91□□□□□ -0.82
SHROOM4-201ENST00000289292 PRRC2CQ9Y520 2896 aaKnown RBP9.91□□□□□ -0.82
SHROOM4-201ENST00000289292 Q5XG85 94 aa9.91□□□□□ -0.82
SHROOM4-201ENST00000289292 PLA2G1BP04054 148 aaKnown RBP9.91□□□□□ -0.82
SHROOM4-201ENST00000289292 USP9YO00507 2555 aaPredicted RBP9.9□□□□□ -0.83
SHROOM4-201ENST00000289292 POLQO75417 2590 aa9.89□□□□□ -0.83
SHROOM4-201ENST00000289292 WIPF1O43516 503 aa9.88□□□□□ -0.83
SHROOM4-201ENST00000289292 C9orf92A6NGG3 77 aa9.88□□□□□ -0.83
SHROOM4-201ENST00000289292 APLNQ9ULZ1 77 aa9.86□□□□□ -0.83
SHROOM4-201ENST00000289292 PKD1L2Q7Z442 2459 aa9.86□□□□□ -0.83
SHROOM4-201ENST00000289292 TLX1NBP0CAT3 122 aa9.86□□□□□ -0.83
SHROOM4-201ENST00000289292 K7EIL1 84 aa9.86□□□□□ -0.83
SHROOM4-201ENST00000289292 OCR1Q9BZK8 76 aa9.86□□□□□ -0.83
SHROOM4-201ENST00000289292 PLA2G2DQ9UNK4 145 aa9.86□□□□□ -0.83
SHROOM4-201ENST00000289292 CDC42SE1Q9NRR8 79 aa9.85□□□□□ -0.83
SHROOM4-201ENST00000289292 ZFYVE26Q68DK2 2539 aa9.84□□□□□ -0.83
SHROOM4-201ENST00000289292 Q1T7F1 81 aa9.83□□□□□ -0.84
SHROOM4-201ENST00000289292 DOPEY1Q5JWR5 2465 aa9.83□□□□□ -0.84
SHROOM4-201ENST00000289292 BRCA2P51587 3418 aa9.83□□□□□ -0.84
SHROOM4-201ENST00000289292 ZNF462Q96JM2 2506 aa9.82□□□□□ -0.84
SHROOM4-201ENST00000289292 ZNF861PO60384 105 aa9.81□□□□□ -0.84
SHROOM4-201ENST00000289292 SPANXA2-OT1Q8N9U9 137 aa9.81□□□□□ -0.84
SHROOM4-201ENST00000289292 CHD8Q9HCK8 2581 aa9.8□□□□□ -0.84
SHROOM4-201ENST00000289292 PIEZO1Q92508 2521 aa9.8□□□□□ -0.84
SHROOM4-201ENST00000289292 HTTP42858 3142 aa9.79□□□□□ -0.84
SHROOM4-201ENST00000289292 Q8NDZ9 215 aa9.78□□□□□ -0.84
SHROOM4-201ENST00000289292 SPTBN4Q9H254 2564 aa9.78□□□□□ -0.84
SHROOM4-201ENST00000289292 FP248Q71RG6 208 aaPredicted RBP9.77□□□□□ -0.85
SHROOM4-201ENST00000289292 IGLV5-48A0A075B6I7 105 aa9.77□□□□□ -0.85
SHROOM4-201ENST00000289292 KRTAP1-3Q8IUG1 177 aa9.76□□□□□ -0.85
SHROOM4-201ENST00000289292 RBM12B-AS1Q9P1G2 102 aa9.76□□□□□ -0.85
SHROOM4-201ENST00000289292 PSORS1C2Q9UIG4 136 aa9.76□□□□□ -0.85
SHROOM4-201ENST00000289292 Q8N1X5 172 aa9.76□□□□□ -0.85
SHROOM4-201ENST00000289292 CFAP54Q96N23 3096 aa9.76□□□□□ -0.85
SHROOM4-201ENST00000289292 A0A087WTM6 91 aa9.75□□□□□ -0.85
SHROOM4-201ENST00000289292 MTORP42345 2549 aa9.75□□□□□ -0.85
SHROOM4-201ENST00000289292 PRR26Q8N8Z3 221 aa9.75□□□□□ -0.85
SHROOM4-201ENST00000289292 SPRR4Q96PI1 79 aa9.75□□□□□ -0.85
SHROOM4-201ENST00000289292 CRIPTQ9P021 101 aa9.74□□□□□ -0.85
SHROOM4-201ENST00000289292 C9orf163Q8N9P6 203 aa9.74□□□□□ -0.85
SHROOM4-201ENST00000289292 ACANP16112 2415 aa9.72□□□□□ -0.85
SHROOM4-201ENST00000289292 A0A0D9SG42 100 aa9.71□□□□□ -0.85
SHROOM4-201ENST00000289292 OXTP01178 125 aa9.71□□□□□ -0.86
SHROOM4-201ENST00000289292 LINC00304Q8N9R0 145 aa9.71□□□□□ -0.86
SHROOM4-201ENST00000289292 SMR3BP02814 79 aaPredicted RBP9.7□□□□□ -0.86
SHROOM4-201ENST00000289292 IGLV7-43P04211 117 aa9.7□□□□□ -0.86
SHROOM4-201ENST00000289292 LAMA2P24043 3122 aaKnown RBP9.69□□□□□ -0.86
SHROOM4-201ENST00000289292 CR1P17927 2039 aa9.67□□□□□ -0.86
SHROOM4-201ENST00000289292 IGLV5-37A0A075B6J1 123 aa9.67□□□□□ -0.86
SHROOM4-201ENST00000289292 KRTAP1-1Q07627 177 aa9.67□□□□□ -0.86
SHROOM4-201ENST00000289292 CNBPP62633 177 aaKnown RBP9.67□□□□□ -0.86
SHROOM4-201ENST00000289292 PRAC1Q96KF2 57 aa9.66□□□□□ -0.86
SHROOM4-201ENST00000289292 LAMA3Q16787 3333 aa9.66□□□□□ -0.86
SHROOM4-201ENST00000289292 Q75L30 129 aa9.65□□□□□ -0.87
SHROOM4-201ENST00000289292 DNAH14Q0VDD8 3507 aa9.64□□□□□ -0.87
SHROOM4-201ENST00000289292 XIRP2A4UGR9 3374 aa9.62□□□□□ -0.87
SHROOM4-201ENST00000289292 UNC80Q8N2C7 3258 aa9.62□□□□□ -0.87
SHROOM4-201ENST00000289292 IGLV7-46A0A075B6I9 117 aa9.61□□□□□ -0.87
SHROOM4-201ENST00000289292 CHD9Q3L8U1 2897 aa9.61□□□□□ -0.87
SHROOM4-201ENST00000289292 WWC2-AS2Q96NR7 200 aa9.6□□□□□ -0.87
SHROOM4-201ENST00000289292 Q8N9P0 234 aaPredicted RBP9.6□□□□□ -0.87
SHROOM4-201ENST00000289292 Q5VV11 94 aa9.58□□□□□ -0.88
SHROOM4-201ENST00000289292 CDH23Q9H251 3354 aa9.57□□□□□ -0.88
SHROOM4-201ENST00000289292 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.56□□□□□ -0.88
SHROOM4-201ENST00000289292 H3BS24 57 aa9.56□□□□□ -0.88
SHROOM4-201ENST00000289292 TRIOO75962 3097 aa9.55□□□□□ -0.88
SHROOM4-201ENST00000289292 RANBP2P49792 3224 aaKnown RBP9.55□□□□□ -0.88
SHROOM4-201ENST00000289292 HRES1P13985 223 aa9.54□□□□□ -0.88
SHROOM4-201ENST00000289292 LINC01554Q52M75 96 aa9.54□□□□□ -0.88
SHROOM4-201ENST00000289292 MMP24-AS1A0A0U1RRL7 71 aa9.52□□□□□ -0.89
SHROOM4-201ENST00000289292 SPINK7P58062 85 aa9.52□□□□□ -0.89
SHROOM4-201ENST00000289292 LINC01558Q9Y6Z2 57 aa9.51□□□□□ -0.89
SHROOM4-201ENST00000289292 CELSR3Q9NYQ7 3312 aa9.51□□□□□ -0.89
SHROOM4-201ENST00000289292 CSAG1Q6PB30 78 aa9.46□□□□□ -0.9
SHROOM4-201ENST00000289292 FASNP49327 2511 aaKnown RBP9.46□□□□□ -0.9
SHROOM4-201ENST00000289292 F8P00451 2351 aa9.45□□□□□ -0.9
SHROOM4-201ENST00000289292 TNP2Q05952 138 aa9.44□□□□□ -0.9
SHROOM4-201ENST00000289292 COX6B2Q6YFQ2 88 aa9.44□□□□□ -0.9
SHROOM4-201ENST00000289292 PRUNE2Q8WUY3 3088 aa9.43□□□□□ -0.9
SHROOM4-201ENST00000289292 A0A1B0GU33 70 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 116.4 ms