RNA–Protein interactions for RNA: ENST00000286307.5

LSM11-201, Transcript of LSM11, U7 small nuclear RNA associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM11, Length 6,584 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM11-201ENST00000286307 Q6ZQT0 140 aa12.59□□□□□ -0.39
LSM11-201ENST00000286307 A0A1W2PNN7 141 aa12.59□□□□□ -0.39
LSM11-201ENST00000286307 KCNQ1DNQ9H478 68 aa12.58□□□□□ -0.4
LSM11-201ENST00000286307 HELZ2Q9BYK8 2649 aaKnown RBP12.57□□□□□ -0.4
LSM11-201ENST00000286307 C8orf87E5RJ46 101 aa12.57□□□□□ -0.4
LSM11-201ENST00000286307 USP24Q9UPU5 2620 aa12.56□□□□□ -0.4
LSM11-201ENST00000286307 PSPHP1O15172 72 aa12.55□□□□□ -0.4
LSM11-201ENST00000286307 SSBP3-AS1Q7Z2R9 100 aa12.54□□□□□ -0.4
LSM11-201ENST00000286307 A0A1B0GW54 56 aa12.54□□□□□ -0.4
LSM11-201ENST00000286307 TRBV7-4A0A0J9YYF1 115 aa12.52□□□□□ -0.41
LSM11-201ENST00000286307 A0A1B0GU69 56 aa12.52□□□□□ -0.41
LSM11-201ENST00000286307 PCNTO95613 3336 aa12.51□□□□□ -0.41
LSM11-201ENST00000286307 LOC110117498A0A087WWA1 95 aa12.5□□□□□ -0.41
LSM11-201ENST00000286307 PRRC2CQ9Y520 2896 aaKnown RBP12.5□□□□□ -0.41
LSM11-201ENST00000286307 SMIM26A0A096LP01 95 aa12.5□□□□□ -0.41
LSM11-201ENST00000286307 A8MWP4 228 aa12.5□□□□□ -0.41
LSM11-201ENST00000286307 IGFL1Q6UW32 110 aa12.49□□□□□ -0.41
LSM11-201ENST00000286307 A0A0G2JQZ4 141 aa12.49□□□□□ -0.41
LSM11-201ENST00000286307 MRPL34Q9BQ48 92 aaKnown RBP12.48□□□□□ -0.41
LSM11-201ENST00000286307 TRAV22A0A0B4J277 110 aa12.48□□□□□ -0.41
LSM11-201ENST00000286307 CHD7Q9P2D1 2997 aa12.48□□□□□ -0.41
LSM11-201ENST00000286307 TLX1NBP0CAT3 122 aa12.47□□□□□ -0.41
LSM11-201ENST00000286307 CNBPP62633 177 aaKnown RBP12.47□□□□□ -0.41
LSM11-201ENST00000286307 IGLV8-61A0A075B6I0 122 aa12.46□□□□□ -0.42
LSM11-201ENST00000286307 CR1P17927 2039 aa12.45□□□□□ -0.42
LSM11-201ENST00000286307 ITPR3Q14573 2671 aa12.45□□□□□ -0.42
LSM11-201ENST00000286307 FLNAP21333 2647 aaKnown RBP12.45□□□□□ -0.42
LSM11-201ENST00000286307 BPTFQ12830 3046 aa12.45□□□□□ -0.42
LSM11-201ENST00000286307 LITAFQ99732 161 aa12.45□□□□□ -0.42
LSM11-201ENST00000286307 IGLV5-37A0A075B6J1 123 aa12.43□□□□□ -0.42
LSM11-201ENST00000286307 RBM12B-AS1Q9P1G2 102 aa12.43□□□□□ -0.42
LSM11-201ENST00000286307 K7EQZ3 153 aa12.42□□□□□ -0.42
LSM11-201ENST00000286307 PLA2G2DQ9UNK4 145 aa12.41□□□□□ -0.42
LSM11-201ENST00000286307 CFAP46Q8IYW2 2715 aa12.38□□□□□ -0.43
LSM11-201ENST00000286307 SPRR4Q96PI1 79 aa12.38□□□□□ -0.43
LSM11-201ENST00000286307 LOC101927531A0A1B0GV80 90 aa12.36□□□□□ -0.43
LSM11-201ENST00000286307 Q8N377 158 aa12.36□□□□□ -0.43
LSM11-201ENST00000286307 C8orf17Q9NRJ1 99 aa12.35□□□□□ -0.43
LSM11-201ENST00000286307 SMCPP49901 116 aaPredicted RBP12.34□□□□□ -0.43
LSM11-201ENST00000286307 A0A1B0GVX0 72 aa12.33□□□□□ -0.44
LSM11-201ENST00000286307 PRR26Q8N8Z3 221 aa12.33□□□□□ -0.44
LSM11-201ENST00000286307 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP12.32□□□□□ -0.44
LSM11-201ENST00000286307 H3BPC8 53 aa12.32□□□□□ -0.44
LSM11-201ENST00000286307 ERC2-IT1O76042 136 aa12.31□□□□□ -0.44
LSM11-201ENST00000286307 PMAIP1Q13794 54 aa12.31□□□□□ -0.44
LSM11-201ENST00000286307 M0R2T5 61 aa12.31□□□□□ -0.44
LSM11-201ENST00000286307 IGLV7-46A0A075B6I9 117 aa12.3□□□□□ -0.44
LSM11-201ENST00000286307 EIF4EBP3O60516 100 aaPredicted RBP12.3□□□□□ -0.44
LSM11-201ENST00000286307 Q6ZSA8 131 aa12.28□□□□□ -0.44
LSM11-201ENST00000286307 MKI67P46013 3256 aaKnown RBP12.28□□□□□ -0.44
LSM11-201ENST00000286307 WIPF1O43516 503 aa12.26□□□□□ -0.45
LSM11-201ENST00000286307 PRR15Q8IV56 129 aa12.24□□□□□ -0.45
LSM11-201ENST00000286307 HTTP42858 3142 aa12.24□□□□□ -0.45
LSM11-201ENST00000286307 RANBP2P49792 3224 aaKnown RBP12.24□□□□□ -0.45
LSM11-201ENST00000286307 MAST4O15021 2626 aa12.24□□□□□ -0.45
LSM11-201ENST00000286307 LCE6AA0A183 80 aa12.22□□□□□ -0.45
LSM11-201ENST00000286307 LAMA3Q16787 3333 aa12.21□□□□□ -0.45
LSM11-201ENST00000286307 ATRQ13535 2644 aa12.21□□□□□ -0.46
LSM11-201ENST00000286307 LINC01554Q52M75 96 aa12.18□□□□□ -0.46
LSM11-201ENST00000286307 Q5VSD8 79 aa12.18□□□□□ -0.46
LSM11-201ENST00000286307 CHD9Q3L8U1 2897 aa12.17□□□□□ -0.46
LSM11-201ENST00000286307 PRO0461Q9UI25 63 aa12.16□□□□□ -0.46
LSM11-201ENST00000286307 C1orf195Q5TG92 126 aa12.15□□□□□ -0.47
LSM11-201ENST00000286307 Q8N1X5 172 aa12.09□□□□□ -0.47
LSM11-201ENST00000286307 LINC01600Q96MT4 127 aa12.09□□□□□ -0.47
LSM11-201ENST00000286307 BRCA2P51587 3418 aa12.08□□□□□ -0.48
LSM11-201ENST00000286307 IGLV5-48A0A075B6I7 105 aa12.05□□□□□ -0.48
LSM11-201ENST00000286307 PLAC8Q9NZF1 115 aa12.05□□□□□ -0.48
LSM11-201ENST00000286307 COA5Q86WW8 74 aa12.05□□□□□ -0.48
LSM11-201ENST00000286307 BAHCC1Q9P281 2608 aa12.05□□□□□ -0.48
LSM11-201ENST00000286307 A0A1W2PNM2 257 aa12.01□□□□□ -0.49
LSM11-201ENST00000286307 PRUNE2Q8WUY3 3088 aa12.01□□□□□ -0.49
LSM11-201ENST00000286307 TEP1Q99973 2627 aaKnown RBP12.01□□□□□ -0.49
LSM11-201ENST00000286307 MGAQ8IWI9 3026 aa12□□□□□ -0.49
LSM11-201ENST00000286307 CD164Q04900 197 aa11.98□□□□□ -0.49
LSM11-201ENST00000286307 KRTAP10-2P60368 255 aa11.97□□□□□ -0.49
LSM11-201ENST00000286307 KRTAP10-1P60331 282 aa11.97□□□□□ -0.49
LSM11-201ENST00000286307 FAM229BQ4G0N7 80 aa11.97□□□□□ -0.49
LSM11-201ENST00000286307 CENPEQ02224 2701 aa11.96□□□□□ -0.49
LSM11-201ENST00000286307 KRTAP1-5Q9BYS1 174 aa11.96□□□□□ -0.49
LSM11-201ENST00000286307 A0A0D9SG42 100 aa11.95□□□□□ -0.5
LSM11-201ENST00000286307 SPINT4Q6UDR6 99 aa11.92□□□□□ -0.5
LSM11-201ENST00000286307 SETXQ7Z333 2677 aaKnown RBP11.91□□□□□ -0.5
LSM11-201ENST00000286307 TEX15Q9BXT5 2789 aa11.89□□□□□ -0.51
LSM11-201ENST00000286307 TRANK1O15050 2925 aa11.88□□□□□ -0.51
LSM11-201ENST00000286307 UQCR11O14957 56 aa11.86□□□□□ -0.51
LSM11-201ENST00000286307 ZNF292O60281 2723 aa11.85□□□□□ -0.51
LSM11-201ENST00000286307 AKAP13Q12802 2813 aa11.83□□□□□ -0.52
LSM11-201ENST00000286307 SEC61BP60468 96 aaKnown RBP11.82□□□□□ -0.52
LSM11-201ENST00000286307 FAM104AQ969W3 186 aa11.81□□□□□ -0.52
LSM11-201ENST00000286307 WDFY4Q6ZS81 3184 aa11.81□□□□□ -0.52
LSM11-201ENST00000286307 CFAP54Q96N23 3096 aa11.8□□□□□ -0.52
LSM11-201ENST00000286307 CRIPTQ9P021 101 aa11.79□□□□□ -0.52
LSM11-201ENST00000286307 C4orf26Q17RF5 130 aa11.79□□□□□ -0.52
LSM11-201ENST00000286307 XIRP2A4UGR9 3374 aa11.78□□□□□ -0.52
LSM11-201ENST00000286307 MIR22HGQ0VDD5 57 aa11.78□□□□□ -0.52
LSM11-201ENST00000286307 A8MUN3 132 aa11.75□□□□□ -0.53
LSM11-201ENST00000286307 CDH23Q9H251 3354 aa11.74□□□□□ -0.53
LSM11-201ENST00000286307 A0A0C4DFX4 3053 aa11.72□□□□□ -0.53
LSM11-201ENST00000286307 STAB1Q9NY15 2570 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms