RNA–Protein interactions for RNA: ENST00000277657.12

CCDC7-201, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC7, Length 1,899 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-201ENST00000277657 PKIGQ9Y2B9 76 aa14.07□□□□□ -0.16
CCDC7-201ENST00000277657 IGKV2-24A0A0C4DH68 120 aa14.06□□□□□ -0.16
CCDC7-201ENST00000277657 C1orf134Q5TEV5 83 aa14.06□□□□□ -0.16
CCDC7-201ENST00000277657 MRPL55Q7Z7F7 128 aaKnown RBP14.06□□□□□ -0.16
CCDC7-201ENST00000277657 SDIM1Q6ZPB5 146 aa14.05□□□□□ -0.16
CCDC7-201ENST00000277657 HECTD4Q9Y4D8 3996 aa14.04□□□□□ -0.16
CCDC7-201ENST00000277657 A0A1W2PNN7 141 aa14.03□□□□□ -0.16
CCDC7-201ENST00000277657 RPL37AP8A6NKH3 93 aa14.03□□□□□ -0.16
CCDC7-201ENST00000277657 PRYO14603 147 aa14.03□□□□□ -0.16
CCDC7-201ENST00000277657 LINC00528Q8N1L1 170 aa14.03□□□□□ -0.16
CCDC7-201ENST00000277657 DNAH17Q9UFH2 4485 aa14.02□□□□□ -0.16
CCDC7-201ENST00000277657 CHTF8P0CG12 524 aa14□□□□□ -0.17
CCDC7-201ENST00000277657 SPRR1AP35321 89 aa14□□□□□ -0.17
CCDC7-201ENST00000277657 KRTAP4-16G5E9R7 235 aaPredicted RBP13.99□□□□□ -0.17
CCDC7-201ENST00000277657 VPS25Q9BRG1 176 aa13.99□□□□□ -0.17
CCDC7-201ENST00000277657 TMEM256-PLSCR3K7ERE1 68 aa13.98□□□□□ -0.17
CCDC7-201ENST00000277657 LINC00474Q9P2X8 69 aa13.98□□□□□ -0.17
CCDC7-201ENST00000277657 OBSCN-AS1Q96MR7 158 aa13.97□□□□□ -0.17
CCDC7-201ENST00000277657 Q6ZQY7 126 aa13.97□□□□□ -0.17
CCDC7-201ENST00000277657 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP13.95□□□□□ -0.18
CCDC7-201ENST00000277657 FRAS1Q86XX4 4008 aa13.95□□□□□ -0.18
CCDC7-201ENST00000277657 INAFM2P0DMQ5 153 aa13.94□□□□□ -0.18
CCDC7-201ENST00000277657 B5MCH6 92 aa13.93□□□□□ -0.18
CCDC7-201ENST00000277657 RTL8CO15255 209 aa13.93□□□□□ -0.18
CCDC7-201ENST00000277657 Q6ZRX8 168 aa13.93□□□□□ -0.18
CCDC7-201ENST00000277657 H3BQ85 93 aa13.92□□□□□ -0.18
CCDC7-201ENST00000277657 PANO1I0J062 215 aa13.92□□□□□ -0.18
CCDC7-201ENST00000277657 REG3GQ6UW15 175 aa13.91□□□□□ -0.18
CCDC7-201ENST00000277657 ETDCA0A1B0GVM5 59 aa13.91□□□□□ -0.18
CCDC7-201ENST00000277657 HYDINQ4G0P3 5121 aa13.9□□□□□ -0.18
CCDC7-201ENST00000277657 SPACA4Q8TDM5 124 aa13.89□□□□□ -0.19
CCDC7-201ENST00000277657 FUSP35637 526 aaKnown RBP eCLIP13.89□□□□□ -0.19
CCDC7-201ENST00000277657 TNP2Q05952 138 aa13.89□□□□□ -0.19
CCDC7-201ENST00000277657 CDIP1Q9H305 208 aa13.89□□□□□ -0.19
CCDC7-201ENST00000277657 EPM2AB3EWF7 344 aa13.88□□□□□ -0.19
CCDC7-201ENST00000277657 DHRS4-AS1Q9P1J3 65 aa13.88□□□□□ -0.19
CCDC7-201ENST00000277657 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP13.88□□□□□ -0.19
CCDC7-201ENST00000277657 FAM240AA0A1B0GVK7 77 aa13.87□□□□□ -0.19
CCDC7-201ENST00000277657 JMJD7-PLA2G4BH0Y9G9 81 aa13.87□□□□□ -0.19
CCDC7-201ENST00000277657 GHRHP01286 108 aa13.87□□□□□ -0.19
CCDC7-201ENST00000277657 PHF5AQ7RTV0 110 aaKnown RBP13.87□□□□□ -0.19
CCDC7-201ENST00000277657 Q9BRP9 147 aa13.87□□□□□ -0.19
CCDC7-201ENST00000277657 C14orf132Q9NPU4 83 aa13.85□□□□□ -0.19
CCDC7-201ENST00000277657 IGLV5-52A0A0A0MRZ9 124 aa13.84□□□□□ -0.19
CCDC7-201ENST00000277657 DNAH11Q96DT5 4516 aa13.84□□□□□ -0.19
CCDC7-201ENST00000277657 KRTAP11-1Q8IUC1 163 aa13.83□□□□□ -0.2
CCDC7-201ENST00000277657 UBE2BP63146 152 aa13.81□□□□□ -0.2
CCDC7-201ENST00000277657 DPH3Q96FX2 82 aa13.81□□□□□ -0.2
CCDC7-201ENST00000277657 A0A1B0GV72 72 aa13.8□□□□□ -0.2
CCDC7-201ENST00000277657 ACYP1P07311 99 aa13.8□□□□□ -0.2
CCDC7-201ENST00000277657 LAMTOR3Q9UHA4 124 aa13.8□□□□□ -0.2
CCDC7-201ENST00000277657 SACSQ9NZJ4 4579 aa13.79□□□□□ -0.2
CCDC7-201ENST00000277657 FAT2Q9NYQ8 4349 aa13.79□□□□□ -0.2
CCDC7-201ENST00000277657 LINC01547P58512 204 aaPredicted RBP13.77□□□□□ -0.21
CCDC7-201ENST00000277657 DNAH5Q8TE73 4624 aa13.77□□□□□ -0.21
CCDC7-201ENST00000277657 RBM3P98179 157 aaKnown RBP13.76□□□□□ -0.21
CCDC7-201ENST00000277657 GAGE2AQ6NT46 116 aa13.76□□□□□ -0.21
CCDC7-201ENST00000277657 SMCR5Q8TEV8 140 aa13.76□□□□□ -0.21
CCDC7-201ENST00000277657 ERC2-IT1O76042 136 aa13.76□□□□□ -0.21
CCDC7-201ENST00000277657 FAM19A1Q7Z5A9 133 aa13.76□□□□□ -0.21
CCDC7-201ENST00000277657 NDUFV3P56181 108 aaKnown RBP13.75□□□□□ -0.21
CCDC7-201ENST00000277657 Q8N377 158 aa13.75□□□□□ -0.21
CCDC7-201ENST00000277657 PLAC8Q9NZF1 115 aa13.74□□□□□ -0.21
CCDC7-201ENST00000277657 CCKP06307 115 aa13.74□□□□□ -0.21
CCDC7-201ENST00000277657 KRTAP10-2P60368 255 aa13.74□□□□□ -0.21
CCDC7-201ENST00000277657 SIGMAR1Q99720 223 aa13.74□□□□□ -0.21
CCDC7-201ENST00000277657 IGLV5-48A0A075B6I7 105 aa13.73□□□□□ -0.21
CCDC7-201ENST00000277657 H0Y9J4 135 aa13.73□□□□□ -0.21
CCDC7-201ENST00000277657 XGP55808 180 aa13.73□□□□□ -0.21
CCDC7-201ENST00000277657 PRLHP81277 87 aa13.73□□□□□ -0.21
CCDC7-201ENST00000277657 PKD1P98161 4303 aa13.73□□□□□ -0.21
CCDC7-201ENST00000277657 LOC110117498A0A087WWA1 95 aa13.72□□□□□ -0.21
CCDC7-201ENST00000277657 ST20-AS1Q8NBB2 130 aa13.72□□□□□ -0.21
CCDC7-201ENST00000277657 DNAH8Q96JB1 4490 aa13.71□□□□□ -0.21
CCDC7-201ENST00000277657 DEFB105AQ8NG35 78 aa13.71□□□□□ -0.21
CCDC7-201ENST00000277657 Q6ZQT0 140 aa13.7□□□□□ -0.22
CCDC7-201ENST00000277657 LCE6AA0A183 80 aa13.68□□□□□ -0.22
CCDC7-201ENST00000277657 DSCR8Q96T75 97 aa13.68□□□□□ -0.22
CCDC7-201ENST00000277657 BCE1O60756 84 aa13.67□□□□□ -0.22
CCDC7-201ENST00000277657 TRBV7-4A0A0J9YYF1 115 aa13.67□□□□□ -0.22
CCDC7-201ENST00000277657 MT-ATP8P03928 68 aa13.67□□□□□ -0.22
CCDC7-201ENST00000277657 PDE6GP18545 87 aa13.67□□□□□ -0.22
CCDC7-201ENST00000277657 HIGD2AQ9BW72 106 aa13.65□□□□□ -0.22
CCDC7-201ENST00000277657 KRTAP13-1Q8IUC0 172 aa13.65□□□□□ -0.22
CCDC7-201ENST00000277657 UBE2AP49459 152 aa13.63□□□□□ -0.23
CCDC7-201ENST00000277657 LINC00846Q9NV44 126 aa13.62□□□□□ -0.23
CCDC7-201ENST00000277657 C3orf22Q8N5N4 141 aa13.61□□□□□ -0.23
CCDC7-201ENST00000277657 FAM30AQ9NZY2 134 aa13.59□□□□□ -0.23
CCDC7-201ENST00000277657 Q6ZSA8 131 aa13.58□□□□□ -0.24
CCDC7-201ENST00000277657 SMIM29Q86T20 159 aa13.58□□□□□ -0.24
CCDC7-201ENST00000277657 LINC00643Q86TS7 51 aa13.58□□□□□ -0.24
CCDC7-201ENST00000277657 PSORS1C2Q9UIG4 136 aa13.58□□□□□ -0.24
CCDC7-201ENST00000277657 C21orf62-AS1Q17RA5 79 aa13.57□□□□□ -0.24
CCDC7-201ENST00000277657 KRTAP10-1P60331 282 aa13.56□□□□□ -0.24
CCDC7-201ENST00000277657 SRRM2Q9UQ35 2752 aaKnown RBP13.56□□□□□ -0.24
CCDC7-201ENST00000277657 CIRBP-AS1Q8TBR5 109 aa13.54□□□□□ -0.24
CCDC7-201ENST00000277657 SPRR1BP22528 89 aa13.53□□□□□ -0.24
CCDC7-201ENST00000277657 LINC00336Q6ZUF6 198 aa13.52□□□□□ -0.25
CCDC7-201ENST00000277657 RYR2Q92736 4967 aa13.51□□□□□ -0.25
CCDC7-201ENST00000277657 SCGB1A1P11684 91 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms