RNA–Protein interactions for RNA: ENST00000266679.8

CPSF6-201, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 1 (best) BASIC

Gene CPSF6, Length 2,229 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-201ENST00000266679 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.44□□□□□ -1.06
CPSF6-201ENST00000266679 SACSQ9NZJ4 4579 aa8.44□□□□□ -1.06
CPSF6-201ENST00000266679 DSCR8Q96T75 97 aa8.44□□□□□ -1.06
CPSF6-201ENST00000266679 TM2D3Q9BRN9 247 aa8.44□□□□□ -1.06
CPSF6-201ENST00000266679 H3BQ85 93 aa8.43□□□□□ -1.06
CPSF6-201ENST00000266679 UBL5Q9BZL1 73 aa8.43□□□□□ -1.06
CPSF6-201ENST00000266679 ATOX1O00244 68 aa8.42□□□□□ -1.06
CPSF6-201ENST00000266679 SERTAD4-AS1Q5TG53 156 aa8.42□□□□□ -1.06
CPSF6-201ENST00000266679 C3orf22Q8N5N4 141 aa8.42□□□□□ -1.06
CPSF6-201ENST00000266679 NKAPP1Q8N9T2 125 aa8.42□□□□□ -1.06
CPSF6-201ENST00000266679 USP17L23D6RBM5 183 aa8.42□□□□□ -1.06
CPSF6-201ENST00000266679 LINC00528Q8N1L1 170 aa8.42□□□□□ -1.06
CPSF6-201ENST00000266679 DNAH1Q9P2D7 4330 aa8.41□□□□□ -1.06
CPSF6-201ENST00000266679 RYR2Q92736 4967 aa8.41□□□□□ -1.06
CPSF6-201ENST00000266679 ATP5EP2Q5VTU8 51 aa8.41□□□□□ -1.06
CPSF6-201ENST00000266679 C9orf153Q5TBE3 101 aa8.41□□□□□ -1.06
CPSF6-201ENST00000266679 UQCRQO14949 82 aa8.39□□□□□ -1.07
CPSF6-201ENST00000266679 C7orf33Q8WU49 177 aa8.39□□□□□ -1.07
CPSF6-201ENST00000266679 FAM19A1Q7Z5A9 133 aa8.39□□□□□ -1.07
CPSF6-201ENST00000266679 COX7CP15954 63 aa8.38□□□□□ -1.07
CPSF6-201ENST00000266679 FAM168BA1KXE4 195 aa8.37□□□□□ -1.07
CPSF6-201ENST00000266679 GHRHP01286 108 aa8.37□□□□□ -1.07
CPSF6-201ENST00000266679 TLX1NBP0CAT3 122 aa8.37□□□□□ -1.07
CPSF6-201ENST00000266679 PDE6GP18545 87 aa8.37□□□□□ -1.07
CPSF6-201ENST00000266679 RMI2Q96E14 147 aa8.37□□□□□ -1.07
CPSF6-201ENST00000266679 TRBV7-4A0A0J9YYF1 115 aa8.36□□□□□ -1.07
CPSF6-201ENST00000266679 Q6ZVQ6 151 aa8.36□□□□□ -1.07
CPSF6-201ENST00000266679 KCNQ1DNQ9H478 68 aa8.36□□□□□ -1.07
CPSF6-201ENST00000266679 RPL37AP8A6NKH3 93 aa8.35□□□□□ -1.07
CPSF6-201ENST00000266679 UPK3BQ9BT76 320 aa8.35□□□□□ -1.07
CPSF6-201ENST00000266679 SVIPQ8NHG7 77 aa8.35□□□□□ -1.07
CPSF6-201ENST00000266679 HAMPP81172 84 aa8.34□□□□□ -1.07
CPSF6-201ENST00000266679 HYDINQ4G0P3 5121 aa8.34□□□□□ -1.07
CPSF6-201ENST00000266679 PLECQ15149 4684 aaKnown RBP8.34□□□□□ -1.07
CPSF6-201ENST00000266679 PLA2G2DQ9UNK4 145 aa8.34□□□□□ -1.07
CPSF6-201ENST00000266679 LINC01547P58512 204 aaPredicted RBP8.33□□□□□ -1.08
CPSF6-201ENST00000266679 DEFB105AQ8NG35 78 aa8.33□□□□□ -1.08
CPSF6-201ENST00000266679 C3orf84H3BNL1 204 aa8.33□□□□□ -1.08
CPSF6-201ENST00000266679 FAM19A5Q7Z5A7 132 aaPredicted RBP8.32□□□□□ -1.08
CPSF6-201ENST00000266679 SERP2Q8N6R1 65 aa8.32□□□□□ -1.08
CPSF6-201ENST00000266679 IGLV5-37A0A075B6J1 123 aa8.31□□□□□ -1.08
CPSF6-201ENST00000266679 KRTAP7-1Q8IUC3 87 aa8.31□□□□□ -1.08
CPSF6-201ENST00000266679 PRYO14603 147 aa8.3□□□□□ -1.08
CPSF6-201ENST00000266679 IGLV1-50A0A075B6I6 118 aa8.3□□□□□ -1.08
CPSF6-201ENST00000266679 CRYGAP11844 174 aa8.3□□□□□ -1.08
CPSF6-201ENST00000266679 SCXQ7RTU7 201 aa8.3□□□□□ -1.08
CPSF6-201ENST00000266679 EPPK1P58107 5090 aaKnown RBP8.29□□□□□ -1.08
CPSF6-201ENST00000266679 LOC107984640A0A0U1RRK4 108 aa8.29□□□□□ -1.08
CPSF6-201ENST00000266679 ETDCA0A1B0GVM5 59 aa8.29□□□□□ -1.08
CPSF6-201ENST00000266679 Q6ZRX8 168 aa8.29□□□□□ -1.08
CPSF6-201ENST00000266679 Q8N377 158 aa8.29□□□□□ -1.08
CPSF6-201ENST00000266679 CYSTM1Q9H1C7 97 aa8.29□□□□□ -1.08
CPSF6-201ENST00000266679 Q9BRP9 147 aa8.28□□□□□ -1.08
CPSF6-201ENST00000266679 KRTAP1-5Q9BYS1 174 aa8.28□□□□□ -1.08
CPSF6-201ENST00000266679 KRTAP4-16G5E9R7 235 aaPredicted RBP8.27□□□□□ -1.08
CPSF6-201ENST00000266679 DHRS4-AS1Q9P1J3 65 aa8.27□□□□□ -1.08
CPSF6-201ENST00000266679 DNAH10Q8IVF4 4471 aa8.27□□□□□ -1.09
CPSF6-201ENST00000266679 CXCL6P80162 114 aa8.27□□□□□ -1.09
CPSF6-201ENST00000266679 MRPL55Q7Z7F7 128 aaKnown RBP8.27□□□□□ -1.09
CPSF6-201ENST00000266679 ALMS1Q8TCU4 4167 aa8.27□□□□□ -1.09
CPSF6-201ENST00000266679 SPRR1AP35321 89 aa8.26□□□□□ -1.09
CPSF6-201ENST00000266679 UBE2DNLQ8IWF7 75 aa8.26□□□□□ -1.09
CPSF6-201ENST00000266679 SMIM20Q8N5G0 67 aa8.26□□□□□ -1.09
CPSF6-201ENST00000266679 ST20-AS1Q8NBB2 130 aa8.26□□□□□ -1.09
CPSF6-201ENST00000266679 PSCAO43653 123 aa8.23□□□□□ -1.09
CPSF6-201ENST00000266679 A0A096LNI7 61 aa8.22□□□□□ -1.09
CPSF6-201ENST00000266679 IGKV2-24A0A0C4DH68 120 aa8.22□□□□□ -1.09
CPSF6-201ENST00000266679 LCE6AA0A183 80 aa8.22□□□□□ -1.09
CPSF6-201ENST00000266679 ERC2-IT1O76042 136 aa8.22□□□□□ -1.09
CPSF6-201ENST00000266679 UBE2BP63146 152 aa8.22□□□□□ -1.09
CPSF6-201ENST00000266679 FRAS1Q86XX4 4008 aa8.22□□□□□ -1.09
CPSF6-201ENST00000266679 REG3GQ6UW15 175 aa8.21□□□□□ -1.09
CPSF6-201ENST00000266679 APLNQ9ULZ1 77 aa8.21□□□□□ -1.09
CPSF6-201ENST00000266679 KMT2AQ03164 3969 aa8.21□□□□□ -1.1
CPSF6-201ENST00000266679 IGLV5-48A0A075B6I7 105 aa8.21□□□□□ -1.1
CPSF6-201ENST00000266679 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.2□□□□□ -1.1
CPSF6-201ENST00000266679 NREPQ16612 68 aa8.2□□□□□ -1.1
CPSF6-201ENST00000266679 Q8N9L7 120 aa8.19□□□□□ -1.1
CPSF6-201ENST00000266679 TRAV7A0A075B6U4 112 aa8.18□□□□□ -1.1
CPSF6-201ENST00000266679 A0A1W2PNN7 141 aa8.18□□□□□ -1.1
CPSF6-201ENST00000266679 C16orf90A8MZG2 172 aa8.18□□□□□ -1.1
CPSF6-201ENST00000266679 CNBPP62633 177 aaKnown RBP8.18□□□□□ -1.1
CPSF6-201ENST00000266679 TNP2Q05952 138 aa8.18□□□□□ -1.1
CPSF6-201ENST00000266679 C1orf137Q5JT78 98 aa8.18□□□□□ -1.1
CPSF6-201ENST00000266679 C20orf197Q8N268 126 aa8.18□□□□□ -1.1
CPSF6-201ENST00000266679 A0A1W2PNM2 257 aa8.17□□□□□ -1.1
CPSF6-201ENST00000266679 BCE1O60756 84 aa8.17□□□□□ -1.1
CPSF6-201ENST00000266679 FUSP35637 526 aaKnown RBP eCLIP8.17□□□□□ -1.13e-8■■■■□ 26.2
CPSF6-201ENST00000266679 BIRC6Q9NR09 4857 aa8.16□□□□□ -1.1
CPSF6-201ENST00000266679 BPY2O14599 106 aa8.15□□□□□ -1.1
CPSF6-201ENST00000266679 IGKV4-1P06312 121 aa8.15□□□□□ -1.1
CPSF6-201ENST00000266679 TMEM258P61165 79 aa8.15□□□□□ -1.1
CPSF6-201ENST00000266679 PRLHP81277 87 aa8.15□□□□□ -1.1
CPSF6-201ENST00000266679 CHTF8P0CG12 524 aa8.14□□□□□ -1.11
CPSF6-201ENST00000266679 C14orf177Q52M58 125 aa8.13□□□□□ -1.11
CPSF6-201ENST00000266679 Q8NBF4 154 aa8.13□□□□□ -1.11
CPSF6-201ENST00000266679 SMIM29Q86T20 159 aa8.12□□□□□ -1.11
CPSF6-201ENST00000266679 PHF5AQ7RTV0 110 aaKnown RBP8.11□□□□□ -1.11
CPSF6-201ENST00000266679 HIGD2AQ9BW72 106 aa8.11□□□□□ -1.11
CPSF6-201ENST00000266679 F8WEM9 126 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 82.7 ms