RNA–Protein interactions for RNA: ENST00000248089.7

HCFC1R1-201, Transcript of host cell factor C1 regulator 1, humanhuman

TSL 1 (best) BASIC

Gene HCFC1R1, Length 965 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1R1-201ENST00000248089 TIMM17BO60830 172 aa12.22□□□□□ -0.45
HCFC1R1-201ENST00000248089 ERC2-IT1O76042 136 aa12.22□□□□□ -0.45
HCFC1R1-201ENST00000248089 GAGE2AQ6NT46 116 aa12.22□□□□□ -0.45
HCFC1R1-201ENST00000248089 LINC00308Q8TCZ7 52 aa12.22□□□□□ -0.45
HCFC1R1-201ENST00000248089 Q9BRP9 147 aa12.22□□□□□ -0.45
HCFC1R1-201ENST00000248089 SPANXCQ9NY87 97 aa12.2□□□□□ -0.46
HCFC1R1-201ENST00000248089 ZNF73O43830 326 aaPredicted RBP12.18□□□□□ -0.46
HCFC1R1-201ENST00000248089 LINC00483Q53H64 154 aa12.18□□□□□ -0.46
HCFC1R1-201ENST00000248089 ATOH7Q8N100 152 aa12.18□□□□□ -0.46
HCFC1R1-201ENST00000248089 Q8NBF4 154 aa12.18□□□□□ -0.46
HCFC1R1-201ENST00000248089 OR13C6PQ8NH95 151 aa12.18□□□□□ -0.46
HCFC1R1-201ENST00000248089 JOSD1Q15040 202 aaPredicted RBP12.17□□□□□ -0.46
HCFC1R1-201ENST00000248089 C4orf48Q5BLP8 95 aa12.17□□□□□ -0.46
HCFC1R1-201ENST00000248089 SPAG11AQ6PDA7 123 aa12.17□□□□□ -0.46
HCFC1R1-201ENST00000248089 ANKRD39Q53RE8 183 aa12.16□□□□□ -0.46
HCFC1R1-201ENST00000248089 SCGB1D4Q6XE38 83 aa12.16□□□□□ -0.46
HCFC1R1-201ENST00000248089 IGLV9-49A0A0B4J1Y8 123 aa12.15□□□□□ -0.46
HCFC1R1-201ENST00000248089 CTAG1AP78358 180 aa12.15□□□□□ -0.46
HCFC1R1-201ENST00000248089 CBY1Q9Y3M2 126 aa12.15□□□□□ -0.46
HCFC1R1-201ENST00000248089 MOBPQ13875 183 aa12.14□□□□□ -0.47
HCFC1R1-201ENST00000248089 HINT1P49773 126 aaPredicted RBP12.13□□□□□ -0.47
HCFC1R1-201ENST00000248089 IGLV7-46A0A075B6I9 117 aa12.11□□□□□ -0.47
HCFC1R1-201ENST00000248089 SPANXDQ9BXN6 97 aa12.11□□□□□ -0.47
HCFC1R1-201ENST00000248089 AKR1D1P51857 326 aa12.08□□□□□ -0.48
HCFC1R1-201ENST00000248089 ST20-AS1Q8NBB2 130 aa12.08□□□□□ -0.48
HCFC1R1-201ENST00000248089 S100A1P23297 94 aa12.07□□□□□ -0.48
HCFC1R1-201ENST00000248089 S100A2P29034 98 aa12.07□□□□□ -0.48
HCFC1R1-201ENST00000248089 C9orf153Q5TBE3 101 aa12.07□□□□□ -0.48
HCFC1R1-201ENST00000248089 PCP2Q8IVA1 136 aa12.07□□□□□ -0.48
HCFC1R1-201ENST00000248089 LINC00518Q8N0U6 118 aa12.07□□□□□ -0.48
HCFC1R1-201ENST00000248089 HIST3H2BBQ8N257 126 aa12.06□□□□□ -0.48
HCFC1R1-201ENST00000248089 CDIP1Q9H305 208 aa12.06□□□□□ -0.48
HCFC1R1-201ENST00000248089 SPINK1P00995 79 aa12.05□□□□□ -0.48
HCFC1R1-201ENST00000248089 TPRXLQ17RH7 258 aa12.05□□□□□ -0.48
HCFC1R1-201ENST00000248089 COPS9Q8WXC6 57 aa12.05□□□□□ -0.48
HCFC1R1-201ENST00000248089 HIST1H2BLQ99880 126 aa12.04□□□□□ -0.48
HCFC1R1-201ENST00000248089 C6orf99Q4VX62 202 aa12.03□□□□□ -0.48
HCFC1R1-201ENST00000248089 SSBP3-AS1Q7Z2R9 100 aa12.03□□□□□ -0.48
HCFC1R1-201ENST00000248089 IFITM1P13164 125 aa12.02□□□□□ -0.49
HCFC1R1-201ENST00000248089 COX7BP24311 80 aa12.02□□□□□ -0.49
HCFC1R1-201ENST00000248089 DHRS4-AS1Q9P1J3 65 aa12.02□□□□□ -0.49
HCFC1R1-201ENST00000248089 C5orf52A6NGY3 159 aa12□□□□□ -0.49
HCFC1R1-201ENST00000248089 S100A6P06703 90 aa12□□□□□ -0.49
HCFC1R1-201ENST00000248089 ELOF1P60002 83 aaKnown RBP12□□□□□ -0.49
HCFC1R1-201ENST00000248089 SNRPEP62304 92 aaKnown RBP12□□□□□ -0.49
HCFC1R1-201ENST00000248089 Q6ZVH6 145 aa12□□□□□ -0.49
HCFC1R1-201ENST00000248089 FP248Q71RG6 208 aaPredicted RBP12□□□□□ -0.49
HCFC1R1-201ENST00000248089 MUSTN1Q8IVN3 82 aa12□□□□□ -0.49
HCFC1R1-201ENST00000248089 A6NDN8 102 aa11.99□□□□□ -0.49
HCFC1R1-201ENST00000248089 HSBP1L1C9JCN9 74 aa11.97□□□□□ -0.49
HCFC1R1-201ENST00000248089 MUC2Q02817 5179 aa11.95□□□□□ -0.5
HCFC1R1-201ENST00000248089 RPS29P62273 56 aaKnown RBP11.94□□□□□ -0.5
HCFC1R1-201ENST00000248089 SLC25A34Q6PIV7 304 aa11.94□□□□□ -0.5
HCFC1R1-201ENST00000248089 Q8N377 158 aa11.94□□□□□ -0.5
HCFC1R1-201ENST00000248089 SPRR1BP22528 89 aa11.93□□□□□ -0.5
HCFC1R1-201ENST00000248089 DEFB105AQ8NG35 78 aa11.92□□□□□ -0.5
HCFC1R1-201ENST00000248089 TRBV7-6A0A0J9YX20 115 aa11.91□□□□□ -0.5
HCFC1R1-201ENST00000248089 A0A1B0GWB2 263 aa11.91□□□□□ -0.5
HCFC1R1-201ENST00000248089 SLC25A20O43772 301 aa11.91□□□□□ -0.5
HCFC1R1-201ENST00000248089 TAL2Q16559 108 aa11.91□□□□□ -0.5
HCFC1R1-201ENST00000248089 LAMTOR3Q9UHA4 124 aa11.91□□□□□ -0.5
HCFC1R1-201ENST00000248089 TRAV13-2A0A0B4J235 113 aa11.9□□□□□ -0.5
HCFC1R1-201ENST00000248089 Q1RN00 199 aa11.89□□□□□ -0.51
HCFC1R1-201ENST00000248089 KRTAP13-3Q3SY46 172 aa11.89□□□□□ -0.51
HCFC1R1-201ENST00000248089 SCGB1D1O95968 90 aa11.88□□□□□ -0.51
HCFC1R1-201ENST00000248089 A0A0U1RQV1 116 aa11.87□□□□□ -0.51
HCFC1R1-201ENST00000248089 HRCT1Q6UXD1 115 aa11.87□□□□□ -0.51
HCFC1R1-201ENST00000248089 SMIM11BQ8TCY0 68 aa11.87□□□□□ -0.51
HCFC1R1-201ENST00000248089 TEX49A0A1B0GTD5 131 aa11.85□□□□□ -0.51
HCFC1R1-201ENST00000248089 MUC17Q685J3 4493 aa11.84□□□□□ -0.51
HCFC1R1-201ENST00000248089 A4D1N5 150 aa11.83□□□□□ -0.52
HCFC1R1-201ENST00000248089 LIMD2Q9BT23 127 aa11.81□□□□□ -0.52
HCFC1R1-201ENST00000248089 NHP2Q9NX24 153 aaKnown RBP11.81□□□□□ -0.52
HCFC1R1-201ENST00000248089 IGLV5-48A0A075B6I7 105 aa11.79□□□□□ -0.52
HCFC1R1-201ENST00000248089 LINC01547P58512 204 aaPredicted RBP11.79□□□□□ -0.52
HCFC1R1-201ENST00000248089 PRO1933Q9H354 126 aa11.78□□□□□ -0.52
HCFC1R1-201ENST00000248089 VAMP3Q15836 100 aa11.77□□□□□ -0.53
HCFC1R1-201ENST00000248089 SMIM29Q86T20 159 aa11.77□□□□□ -0.53
HCFC1R1-201ENST00000248089 HIST1H4GQ99525 98 aa11.77□□□□□ -0.53
HCFC1R1-201ENST00000248089 C12orf57Q99622 126 aa11.77□□□□□ -0.53
HCFC1R1-201ENST00000248089 COX8AP10176 69 aa11.76□□□□□ -0.53
HCFC1R1-201ENST00000248089 H7C2G1 150 aa11.74□□□□□ -0.53
HCFC1R1-201ENST00000248089 CD164Q04900 197 aa11.72□□□□□ -0.53
HCFC1R1-201ENST00000248089 A0A0G2JQZ4 141 aa11.71□□□□□ -0.53
HCFC1R1-201ENST00000248089 ASB16-AS1Q495Z4 193 aa11.71□□□□□ -0.53
HCFC1R1-201ENST00000248089 LINC00575Q6W349 94 aa11.71□□□□□ -0.53
HCFC1R1-201ENST00000248089 PAM16Q9Y3D7 125 aa11.7□□□□□ -0.54
HCFC1R1-201ENST00000248089 SEC61BP60468 96 aaKnown RBP11.69□□□□□ -0.54
HCFC1R1-201ENST00000248089 SPATA45Q537H7 98 aa11.69□□□□□ -0.54
HCFC1R1-201ENST00000248089 C14orf144Q96I85 54 aa11.69□□□□□ -0.54
HCFC1R1-201ENST00000248089 FAT4Q6V0I7 4981 aa11.68□□□□□ -0.54
HCFC1R1-201ENST00000248089 hADV29S1A0JD25 119 aa11.68□□□□□ -0.54
HCFC1R1-201ENST00000248089 F8WEM9 126 aa11.68□□□□□ -0.54
HCFC1R1-201ENST00000248089 DLEU1O43261 78 aa11.68□□□□□ -0.54
HCFC1R1-201ENST00000248089 Q6ZQY7 126 aa11.68□□□□□ -0.54
HCFC1R1-201ENST00000248089 XP32Q5T750 250 aa11.67□□□□□ -0.54
HCFC1R1-201ENST00000248089 VAMP8Q9BV40 100 aa11.66□□□□□ -0.54
HCFC1R1-201ENST00000248089 C9orf92A6NGG3 77 aa11.63□□□□□ -0.55
HCFC1R1-201ENST00000248089 BVES-AS1Q5T3Y7 98 aa11.63□□□□□ -0.55
HCFC1R1-201ENST00000248089 RAB37Q96AX2 223 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms