RNA–Protein interactions for RNA: ENST00000221930.5

TGFB1-201, Transcript of transforming growth factor beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TGFB1, Length 2,769 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB1-201ENST00000221930 KPRPQ5T749 579 aaPredicted RBP10.2□□□□□ -0.78
TGFB1-201ENST00000221930 FAM229BQ4G0N7 80 aa10.19□□□□□ -0.78
TGFB1-201ENST00000221930 Q6ZTC4 211 aa10.19□□□□□ -0.78
TGFB1-201ENST00000221930 UBL5Q9BZL1 73 aa10.19□□□□□ -0.78
TGFB1-201ENST00000221930 Q6ZQY7 126 aa10.19□□□□□ -0.78
TGFB1-201ENST00000221930 H3BNG1 76 aa10.18□□□□□ -0.78
TGFB1-201ENST00000221930 KRTAP10-11P60412 298 aa10.17□□□□□ -0.78
TGFB1-201ENST00000221930 GVQW2A0A096LPI5 108 aaPredicted RBP10.17□□□□□ -0.78
TGFB1-201ENST00000221930 CAMK2N2Q96S95 79 aa10.17□□□□□ -0.78
TGFB1-201ENST00000221930 MUC7Q8TAX7 377 aa10.16□□□□□ -0.78
TGFB1-201ENST00000221930 M0R2N4 97 aa10.16□□□□□ -0.78
TGFB1-201ENST00000221930 ESRGQ1W209 222 aa10.15□□□□□ -0.78
TGFB1-201ENST00000221930 TRBV7-4A0A0J9YYF1 115 aa10.14□□□□□ -0.79
TGFB1-201ENST00000221930 Q6ZQT0 140 aa10.14□□□□□ -0.79
TGFB1-201ENST00000221930 DIRC1Q969H9 104 aa10.14□□□□□ -0.79
TGFB1-201ENST00000221930 TRAV10A0A0B4J240 114 aa10.13□□□□□ -0.79
TGFB1-201ENST00000221930 ZNF73O43830 326 aaPredicted RBP10.13□□□□□ -0.79
TGFB1-201ENST00000221930 CMYA5Q8N3K9 4069 aa10.13□□□□□ -0.79
TGFB1-201ENST00000221930 KRTAP26-1Q6PEX3 210 aa10.13□□□□□ -0.79
TGFB1-201ENST00000221930 C15orf56Q8N910 161 aa10.12□□□□□ -0.79
TGFB1-201ENST00000221930 MGAM2Q2M2H8 2515 aa10.11□□□□□ -0.79
TGFB1-201ENST00000221930 VPREB1P12018 145 aa10.1□□□□□ -0.79
TGFB1-201ENST00000221930 IGKV2D-24A0A075B6R9 120 aa10.09□□□□□ -0.79
TGFB1-201ENST00000221930 ERC2-IT1O76042 136 aa10.09□□□□□ -0.79
TGFB1-201ENST00000221930 COX7BP24311 80 aa10.09□□□□□ -0.79
TGFB1-201ENST00000221930 MRPL55Q7Z7F7 128 aaKnown RBP10.09□□□□□ -0.79
TGFB1-201ENST00000221930 LOC110117498A0A087WWA1 95 aa10.08□□□□□ -0.8
TGFB1-201ENST00000221930 ELOF1P60002 83 aaKnown RBP10.07□□□□□ -0.8
TGFB1-201ENST00000221930 Q6ZRP5 223 aa10.07□□□□□ -0.8
TGFB1-201ENST00000221930 LINC01547P58512 204 aaPredicted RBP10.06□□□□□ -0.8
TGFB1-201ENST00000221930 TMEM254Q8TBM7 123 aa10.06□□□□□ -0.8
TGFB1-201ENST00000221930 DEFB131BA0A096LNP1 70 aa10.06□□□□□ -0.8
TGFB1-201ENST00000221930 HAMPP81172 84 aa10.06□□□□□ -0.8
TGFB1-201ENST00000221930 TM2D3Q9BRN9 247 aa10.05□□□□□ -0.8
TGFB1-201ENST00000221930 Q1T7F1 81 aa10.04□□□□□ -0.8
TGFB1-201ENST00000221930 M0R378 163 aa10.04□□□□□ -0.8
TGFB1-201ENST00000221930 CXCL6P80162 114 aa10.03□□□□□ -0.8
TGFB1-201ENST00000221930 C4orf48Q5BLP8 95 aa10.03□□□□□ -0.8
TGFB1-201ENST00000221930 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP10.03□□□□□ -0.8
TGFB1-201ENST00000221930 Q6ZVQ6 151 aa10.03□□□□□ -0.8
TGFB1-201ENST00000221930 CSMD3Q7Z407 3707 aa10.03□□□□□ -0.8
TGFB1-201ENST00000221930 C11orf45Q8TAV5 145 aa10.03□□□□□ -0.8
TGFB1-201ENST00000221930 FUSP35637 526 aaKnown RBP eCLIP10.02□□□□□ -0.81
TGFB1-201ENST00000221930 LINC01556Q5JQF7 62 aa10.01□□□□□ -0.81
TGFB1-201ENST00000221930 PRB2P02812 416 aaPredicted RBP10□□□□□ -0.81
TGFB1-201ENST00000221930 NREPQ16612 68 aa10□□□□□ -0.81
TGFB1-201ENST00000221930 SYCNQ0VAF6 134 aa10□□□□□ -0.81
TGFB1-201ENST00000221930 LINC00528Q8N1L1 170 aa10□□□□□ -0.81
TGFB1-201ENST00000221930 PRYO14603 147 aa9.99□□□□□ -0.81
TGFB1-201ENST00000221930 SCXQ7RTU7 201 aa9.99□□□□□ -0.81
TGFB1-201ENST00000221930 DNAH3Q8TD57 4116 aa9.99□□□□□ -0.81
TGFB1-201ENST00000221930 PDE6GP18545 87 aa9.98□□□□□ -0.81
TGFB1-201ENST00000221930 SERTAD4-AS1Q5TG53 156 aa9.98□□□□□ -0.81
TGFB1-201ENST00000221930 RBM12B-AS1Q9P1G2 102 aa9.98□□□□□ -0.81
TGFB1-201ENST00000221930 H3BQ85 93 aa9.97□□□□□ -0.81
TGFB1-201ENST00000221930 LYSTQ99698 3801 aa9.97□□□□□ -0.81
TGFB1-201ENST00000221930 TENM2Q9NT68 2774 aa9.96□□□□□ -0.81
TGFB1-201ENST00000221930 hDV103S1A0JD37 113 aa9.96□□□□□ -0.81
TGFB1-201ENST00000221930 KTN1-AS1Q86SY8 53 aa9.96□□□□□ -0.82
TGFB1-201ENST00000221930 NKAPP1Q8N9T2 125 aa9.95□□□□□ -0.82
TGFB1-201ENST00000221930 DEFB105AQ8NG35 78 aa9.95□□□□□ -0.82
TGFB1-201ENST00000221930 CASC10Q5T4H9 136 aa9.95□□□□□ -0.82
TGFB1-201ENST00000221930 C7orf33Q8WU49 177 aa9.94□□□□□ -0.82
TGFB1-201ENST00000221930 FAM168BA1KXE4 195 aa9.93□□□□□ -0.82
TGFB1-201ENST00000221930 RPL37AP8A6NKH3 93 aa9.93□□□□□ -0.82
TGFB1-201ENST00000221930 DNAH10OSP0CZ25 163 aa9.93□□□□□ -0.82
TGFB1-201ENST00000221930 BPY2O14599 106 aa9.92□□□□□ -0.82
TGFB1-201ENST00000221930 LINC00588Q9Y4M8 146 aa9.92□□□□□ -0.82
TGFB1-201ENST00000221930 KCNQ1DNQ9H478 68 aa9.91□□□□□ -0.82
TGFB1-201ENST00000221930 DNAH1Q9P2D7 4330 aa9.89□□□□□ -0.83
TGFB1-201ENST00000221930 Q8N9L7 120 aa9.89□□□□□ -0.83
TGFB1-201ENST00000221930 DNAH10Q8IVF4 4471 aa9.88□□□□□ -0.83
TGFB1-201ENST00000221930 TRAV22A0A0B4J277 110 aa9.87□□□□□ -0.83
TGFB1-201ENST00000221930 C3orf84H3BNL1 204 aa9.87□□□□□ -0.83
TGFB1-201ENST00000221930 Q8N377 158 aa9.87□□□□□ -0.83
TGFB1-201ENST00000221930 OCR1Q9BZK8 76 aa9.87□□□□□ -0.83
TGFB1-201ENST00000221930 STAB2Q8WWQ8 2551 aa9.87□□□□□ -0.83
TGFB1-201ENST00000221930 HUWE1Q7Z6Z7 4374 aaKnown RBP9.87□□□□□ -0.83
TGFB1-201ENST00000221930 UBE2BP63146 152 aa9.86□□□□□ -0.83
TGFB1-201ENST00000221930 COL7A1Q02388 2944 aa9.86□□□□□ -0.83
TGFB1-201ENST00000221930 PSPHP1O15172 72 aa9.86□□□□□ -0.83
TGFB1-201ENST00000221930 K7EIL1 84 aa9.85□□□□□ -0.83
TGFB1-201ENST00000221930 Q9BRP9 147 aa9.85□□□□□ -0.83
TGFB1-201ENST00000221930 KRTAP7-1Q8IUC3 87 aa9.84□□□□□ -0.83
TGFB1-201ENST00000221930 C1orf64Q8NEQ6 169 aa9.84□□□□□ -0.83
TGFB1-201ENST00000221930 TLX1NBP0CAT3 122 aa9.83□□□□□ -0.84
TGFB1-201ENST00000221930 Q6ZRX8 168 aa9.83□□□□□ -0.84
TGFB1-201ENST00000221930 IGLV1-50A0A075B6I6 118 aa9.82□□□□□ -0.84
TGFB1-201ENST00000221930 NDUFS5O43920 106 aa9.82□□□□□ -0.84
TGFB1-201ENST00000221930 ST20-AS1Q8NBB2 130 aa9.82□□□□□ -0.84
TGFB1-201ENST00000221930 LRCOL1A6NCL2 159 aa9.82□□□□□ -0.84
TGFB1-201ENST00000221930 HIGD2AQ9BW72 106 aa9.81□□□□□ -0.84
TGFB1-201ENST00000221930 KRTAP4-16G5E9R7 235 aaPredicted RBP9.81□□□□□ -0.84
TGFB1-201ENST00000221930 ETDCA0A1B0GVM5 59 aa9.8□□□□□ -0.84
TGFB1-201ENST00000221930 SRRM2Q9UQ35 2752 aaKnown RBP9.8□□□□□ -0.84
TGFB1-201ENST00000221930 DHRS4-AS1Q9P1J3 65 aa9.79□□□□□ -0.84
TGFB1-201ENST00000221930 PLA2G2DQ9UNK4 145 aa9.79□□□□□ -0.84
TGFB1-201ENST00000221930 IGLV5-48A0A075B6I7 105 aa9.78□□□□□ -0.84
TGFB1-201ENST00000221930 PHF5AQ7RTV0 110 aaKnown RBP9.78□□□□□ -0.84
TGFB1-201ENST00000221930 IGKV4-1P06312 121 aa9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 97.6 ms