RNA–Protein interactions for RNA: ENST00000218364.4

HTATSF1-201, Transcript of HIV-1 Tat specific factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HTATSF1, Length 2,775 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTATSF1-201ENST00000218364 C4orf26Q17RF5 130 aa14.49□□□□□ -0.09
HTATSF1-201ENST00000218364 LINC01556Q5JQF7 62 aa14.49□□□□□ -0.09
HTATSF1-201ENST00000218364 SYCNQ0VAF6 134 aa14.48□□□□□ -0.09
HTATSF1-201ENST00000218364 KRTAP24-1Q3LI83 254 aa14.48□□□□□ -0.09
HTATSF1-201ENST00000218364 NDUFC1O43677 76 aa14.47□□□□□ -0.09
HTATSF1-201ENST00000218364 NREPQ16612 68 aa14.46□□□□□ -0.09
HTATSF1-201ENST00000218364 BPY2O14599 106 aa14.46□□□□□ -0.09
HTATSF1-201ENST00000218364 F8WEM9 126 aa14.45□□□□□ -0.1
HTATSF1-201ENST00000218364 IGKV4-1P06312 121 aa14.45□□□□□ -0.1
HTATSF1-201ENST00000218364 ATRQ13535 2644 aa14.45□□□□□ -0.1
HTATSF1-201ENST00000218364 TENM1Q9UKZ4 2725 aa14.45□□□□□ -0.1
HTATSF1-201ENST00000218364 IGKV2D-24A0A075B6R9 120 aa14.45□□□□□ -0.1
HTATSF1-201ENST00000218364 ERC2-IT1O76042 136 aa14.45□□□□□ -0.1
HTATSF1-201ENST00000218364 C7orf33Q8WU49 177 aa14.44□□□□□ -0.1
HTATSF1-201ENST00000218364 Q8N377 158 aa14.43□□□□□ -0.1
HTATSF1-201ENST00000218364 NKAPP1Q8N9T2 125 aa14.43□□□□□ -0.1
HTATSF1-201ENST00000218364 IGLV5-48A0A075B6I7 105 aa14.43□□□□□ -0.1
HTATSF1-201ENST00000218364 SERTAD4-AS1Q5TG53 156 aa14.43□□□□□ -0.1
HTATSF1-201ENST00000218364 FBN1P35555 2871 aaKnown RBP14.42□□□□□ -0.1
HTATSF1-201ENST00000218364 Q8N9L7 120 aa14.4□□□□□ -0.1
HTATSF1-201ENST00000218364 PLA2G2DQ9UNK4 145 aa14.4□□□□□ -0.1
HTATSF1-201ENST00000218364 TLX1NBP0CAT3 122 aa14.39□□□□□ -0.11
HTATSF1-201ENST00000218364 HRCT1Q6UXD1 115 aa14.39□□□□□ -0.11
HTATSF1-201ENST00000218364 KRTAP10-11P60412 298 aa14.39□□□□□ -0.11
HTATSF1-201ENST00000218364 TMEM254Q8TBM7 123 aa14.38□□□□□ -0.11
HTATSF1-201ENST00000218364 OXLD1Q5BKU9 147 aa14.37□□□□□ -0.11
HTATSF1-201ENST00000218364 DEFB105AQ8NG35 78 aa14.37□□□□□ -0.11
HTATSF1-201ENST00000218364 A0A1B0GW54 56 aa14.37□□□□□ -0.11
HTATSF1-201ENST00000218364 OCR1Q9BZK8 76 aa14.37□□□□□ -0.11
HTATSF1-201ENST00000218364 DHRS4-AS1Q9P1J3 65 aa14.37□□□□□ -0.11
HTATSF1-201ENST00000218364 ATP5EP56381 51 aaPredicted RBP14.36□□□□□ -0.11
HTATSF1-201ENST00000218364 C3orf84H3BNL1 204 aa14.36□□□□□ -0.11
HTATSF1-201ENST00000218364 DEFB131BA0A096LNP1 70 aa14.35□□□□□ -0.11
HTATSF1-201ENST00000218364 KRTAP4-16G5E9R7 235 aaPredicted RBP14.35□□□□□ -0.11
HTATSF1-201ENST00000218364 DNAH10OSP0CZ25 163 aa14.35□□□□□ -0.11
HTATSF1-201ENST00000218364 Q6ZRX8 168 aa14.35□□□□□ -0.11
HTATSF1-201ENST00000218364 IGLV5-37A0A075B6J1 123 aa14.34□□□□□ -0.11
HTATSF1-201ENST00000218364 SPRR1AP35321 89 aa14.33□□□□□ -0.12
HTATSF1-201ENST00000218364 PRYO14603 147 aa14.32□□□□□ -0.12
HTATSF1-201ENST00000218364 TNP2Q05952 138 aa14.32□□□□□ -0.12
HTATSF1-201ENST00000218364 Q9BRP9 147 aa14.32□□□□□ -0.12
HTATSF1-201ENST00000218364 IGLV1-50A0A075B6I6 118 aa14.31□□□□□ -0.12
HTATSF1-201ENST00000218364 TRRAPQ9Y4A5 3859 aa14.31□□□□□ -0.12
HTATSF1-201ENST00000218364 SMIM26A0A096LP01 95 aa14.3□□□□□ -0.12
HTATSF1-201ENST00000218364 A0A0U1RQV1 116 aa14.3□□□□□ -0.12
HTATSF1-201ENST00000218364 FUSP35637 526 aaKnown RBP eCLIP14.3□□□□□ -0.12
HTATSF1-201ENST00000218364 C11orf45Q8TAV5 145 aa14.3□□□□□ -0.12
HTATSF1-201ENST00000218364 A0A1W2PNM2 257 aa14.29□□□□□ -0.12
HTATSF1-201ENST00000218364 RPL37AP8A6NKH3 93 aa14.27□□□□□ -0.12
HTATSF1-201ENST00000218364 MRAPQ8TCY5 172 aa14.27□□□□□ -0.13
HTATSF1-201ENST00000218364 FAM168BA1KXE4 195 aa14.26□□□□□ -0.13
HTATSF1-201ENST00000218364 ETDCA0A1B0GVM5 59 aa14.25□□□□□ -0.13
HTATSF1-201ENST00000218364 FP248Q71RG6 208 aaPredicted RBP14.25□□□□□ -0.13
HTATSF1-201ENST00000218364 C1orf137Q5JT78 98 aa14.25□□□□□ -0.13
HTATSF1-201ENST00000218364 KRTAP7-1Q8IUC3 87 aa14.25□□□□□ -0.13
HTATSF1-201ENST00000218364 Q8NBF4 154 aa14.23□□□□□ -0.13
HTATSF1-201ENST00000218364 COL6A5A8TX70 2615 aa14.23□□□□□ -0.13
HTATSF1-201ENST00000218364 ST20-AS1Q8NBB2 130 aa14.22□□□□□ -0.13
HTATSF1-201ENST00000218364 STAB1Q9NY15 2570 aa14.22□□□□□ -0.13
HTATSF1-201ENST00000218364 SPRR4Q96PI1 79 aa14.22□□□□□ -0.13
HTATSF1-201ENST00000218364 CASC10Q5T4H9 136 aa14.2□□□□□ -0.14
HTATSF1-201ENST00000218364 LINC00588Q9Y4M8 146 aa14.18□□□□□ -0.14
HTATSF1-201ENST00000218364 SMIM29Q86T20 159 aa14.18□□□□□ -0.14
HTATSF1-201ENST00000218364 LCE6AA0A183 80 aa14.17□□□□□ -0.14
HTATSF1-201ENST00000218364 MRPL55Q7Z7F7 128 aaKnown RBP14.17□□□□□ -0.14
HTATSF1-201ENST00000218364 MDFIQ99750 246 aa14.16□□□□□ -0.14
HTATSF1-201ENST00000218364 HIGD2AQ9BW72 106 aa14.16□□□□□ -0.14
HTATSF1-201ENST00000218364 PKD1L1Q8TDX9 2849 aa14.16□□□□□ -0.14
HTATSF1-201ENST00000218364 DSCR10P59022 87 aa14.13□□□□□ -0.15
HTATSF1-201ENST00000218364 LINC00474Q9P2X8 69 aa14.13□□□□□ -0.15
HTATSF1-201ENST00000218364 FAM30AQ9NZY2 134 aa14.12□□□□□ -0.15
HTATSF1-201ENST00000218364 UBE2BP63146 152 aa14.11□□□□□ -0.15
HTATSF1-201ENST00000218364 LINC00336Q6ZUF6 198 aa14.1□□□□□ -0.15
HTATSF1-201ENST00000218364 ANK2Q01484 3957 aa14.09□□□□□ -0.15
HTATSF1-201ENST00000218364 REG3GQ6UW15 175 aa14.09□□□□□ -0.15
HTATSF1-201ENST00000218364 TENM3Q9P273 2699 aa14.09□□□□□ -0.15
HTATSF1-201ENST00000218364 DNAH1Q9P2D7 4330 aa14.06□□□□□ -0.16
HTATSF1-201ENST00000218364 K7EQZ3 153 aa14.06□□□□□ -0.16
HTATSF1-201ENST00000218364 FAM229BQ4G0N7 80 aa14.05□□□□□ -0.16
HTATSF1-201ENST00000218364 LINC00476Q8WZB0 136 aa14.05□□□□□ -0.16
HTATSF1-201ENST00000218364 PRO0628Q9UI54 55 aa14.05□□□□□ -0.16
HTATSF1-201ENST00000218364 CMYA5Q8N3K9 4069 aa14.04□□□□□ -0.16
HTATSF1-201ENST00000218364 ZCCHC13Q8WW36 166 aaKnown RBP14.03□□□□□ -0.16
HTATSF1-201ENST00000218364 IGFL1Q6UW32 110 aa13.99□□□□□ -0.17
HTATSF1-201ENST00000218364 HCG22E2RYF7 251 aa13.98□□□□□ -0.17
HTATSF1-201ENST00000218364 IGLV8-61A0A075B6I0 122 aa13.98□□□□□ -0.17
HTATSF1-201ENST00000218364 PSCAO43653 123 aa13.96□□□□□ -0.17
HTATSF1-201ENST00000218364 DNAH3Q8TD57 4116 aa13.93□□□□□ -0.18
HTATSF1-201ENST00000218364 IGLV2-33A0A075B6J2 118 aaPredicted RBP13.93□□□□□ -0.18
HTATSF1-201ENST00000218364 A0A0G2JQZ4 141 aa13.93□□□□□ -0.18
HTATSF1-201ENST00000218364 A0A1W2PNN7 141 aa13.93□□□□□ -0.18
HTATSF1-201ENST00000218364 hDV103S1A0JD37 113 aa13.93□□□□□ -0.18
HTATSF1-201ENST00000218364 C16orf90A8MZG2 172 aa13.93□□□□□ -0.18
HTATSF1-201ENST00000218364 A0A096LNI7 61 aa13.92□□□□□ -0.18
HTATSF1-201ENST00000218364 MPLKIPQ8TAP9 179 aa13.92□□□□□ -0.18
HTATSF1-201ENST00000218364 PRLHP81277 87 aa13.91□□□□□ -0.18
HTATSF1-201ENST00000218364 CNBPP62633 177 aaKnown RBP13.9□□□□□ -0.18
HTATSF1-201ENST00000218364 A0A087WSZ3 146 aa13.87□□□□□ -0.19
HTATSF1-201ENST00000218364 IGKV2-24A0A0C4DH68 120 aa13.85□□□□□ -0.19
HTATSF1-201ENST00000218364 DEFB116Q30KQ4 102 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 145.9 ms