RNA–Protein interactions for RNA: ENST00000216639.7

VRK1-201, Transcript of vaccinia related kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VRK1, Length 1,745 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-201ENST00000216639 KRTAP7-1Q8IUC3 87 aa11.15□□□□□ -0.63
VRK1-201ENST00000216639 IGKV2-24A0A0C4DH68 120 aa11.14□□□□□ -0.63
VRK1-201ENST00000216639 SCGB1A1P11684 91 aa11.14□□□□□ -0.63
VRK1-201ENST00000216639 LAMTOR3Q9UHA4 124 aa11.14□□□□□ -0.63
VRK1-201ENST00000216639 C9orf163Q8N9P6 203 aa11.13□□□□□ -0.63
VRK1-201ENST00000216639 PRKDCP78527 4128 aaKnown RBP11.13□□□□□ -0.63
VRK1-201ENST00000216639 ETDCA0A1B0GVM5 59 aa11.12□□□□□ -0.63
VRK1-201ENST00000216639 A0A1B0GV72 72 aa11.12□□□□□ -0.63
VRK1-201ENST00000216639 SPRR1AP35321 89 aa11.12□□□□□ -0.63
VRK1-201ENST00000216639 CSMD3Q7Z407 3707 aa11.11□□□□□ -0.63
VRK1-201ENST00000216639 DHRS4-AS1Q9P1J3 65 aa11.11□□□□□ -0.63
VRK1-201ENST00000216639 RBM3P98179 157 aaKnown RBP11.1□□□□□ -0.63
VRK1-201ENST00000216639 LYSTQ99698 3801 aa11.1□□□□□ -0.63
VRK1-201ENST00000216639 MEGF8Q7Z7M0 2845 aa11.1□□□□□ -0.63
VRK1-201ENST00000216639 CCKP06307 115 aa11.09□□□□□ -0.63
VRK1-201ENST00000216639 Q6ZR54 194 aa11.09□□□□□ -0.63
VRK1-201ENST00000216639 Q6ZRX8 168 aa11.09□□□□□ -0.63
VRK1-201ENST00000216639 LINC00474Q9P2X8 69 aa11.09□□□□□ -0.63
VRK1-201ENST00000216639 B5MCH6 92 aa11.08□□□□□ -0.64
VRK1-201ENST00000216639 KRTAP4-16G5E9R7 235 aaPredicted RBP11.08□□□□□ -0.64
VRK1-201ENST00000216639 REG3GQ6UW15 175 aa11.08□□□□□ -0.64
VRK1-201ENST00000216639 WWC2-AS2Q96NR7 200 aa11.08□□□□□ -0.64
VRK1-201ENST00000216639 PLECQ15149 4684 aaKnown RBP11.08□□□□□ -0.64
VRK1-201ENST00000216639 DNAH7Q8WXX0 4024 aa11.08□□□□□ -0.64
VRK1-201ENST00000216639 FBN3Q75N90 2809 aa11.06□□□□□ -0.64
VRK1-201ENST00000216639 A0A087WTM6 91 aa11.06□□□□□ -0.64
VRK1-201ENST00000216639 A0A1W2PNN7 141 aa11.06□□□□□ -0.64
VRK1-201ENST00000216639 DSCR8Q96T75 97 aa11.06□□□□□ -0.64
VRK1-201ENST00000216639 PDE6GP18545 87 aa11.05□□□□□ -0.64
VRK1-201ENST00000216639 SDIM1Q6ZPB5 146 aa11.05□□□□□ -0.64
VRK1-201ENST00000216639 LINC00643Q86TS7 51 aa11.05□□□□□ -0.64
VRK1-201ENST00000216639 STARD9Q9P2P6 4700 aa11.04□□□□□ -0.64
VRK1-201ENST00000216639 LOC110117498A0A087WWA1 95 aa11.04□□□□□ -0.64
VRK1-201ENST00000216639 LY6G6CO95867 125 aa11.04□□□□□ -0.64
VRK1-201ENST00000216639 NDUFV3P56181 108 aaKnown RBP11.04□□□□□ -0.64
VRK1-201ENST00000216639 CHTF8P0CG12 524 aa11.03□□□□□ -0.64
VRK1-201ENST00000216639 C1orf134Q5TEV5 83 aa11.03□□□□□ -0.64
VRK1-201ENST00000216639 SMCR5Q8TEV8 140 aa11.02□□□□□ -0.65
VRK1-201ENST00000216639 C21orf62-AS1Q17RA5 79 aa11.01□□□□□ -0.65
VRK1-201ENST00000216639 Q6ZQT0 140 aa11.01□□□□□ -0.65
VRK1-201ENST00000216639 Q9BRP9 147 aa11.01□□□□□ -0.65
VRK1-201ENST00000216639 UBE2BP63146 152 aa11.01□□□□□ -0.65
VRK1-201ENST00000216639 Q6Q795 121 aa11.01□□□□□ -0.65
VRK1-201ENST00000216639 DNAH10Q8IVF4 4471 aa10.99□□□□□ -0.65
VRK1-201ENST00000216639 LINC00846Q9NV44 126 aa10.99□□□□□ -0.65
VRK1-201ENST00000216639 DEFB105AQ8NG35 78 aa10.98□□□□□ -0.65
VRK1-201ENST00000216639 DPH3Q96FX2 82 aa10.98□□□□□ -0.65
VRK1-201ENST00000216639 LINC00476Q8WZB0 136 aa10.98□□□□□ -0.65
VRK1-201ENST00000216639 VPS13DQ5THJ4 4388 aa10.97□□□□□ -0.65
VRK1-201ENST00000216639 TRBV7-7A0A0K0K1E9 115 aa10.97□□□□□ -0.65
VRK1-201ENST00000216639 PHF5AQ7RTV0 110 aaKnown RBP10.97□□□□□ -0.65
VRK1-201ENST00000216639 FAM19A1Q7Z5A9 133 aa10.97□□□□□ -0.65
VRK1-201ENST00000216639 TRBV7-4A0A0J9YYF1 115 aa10.96□□□□□ -0.65
VRK1-201ENST00000216639 Q8N377 158 aa10.96□□□□□ -0.65
VRK1-201ENST00000216639 IMUPQ9GZP8 106 aa10.96□□□□□ -0.65
VRK1-201ENST00000216639 RTL8CO15255 209 aa10.95□□□□□ -0.66
VRK1-201ENST00000216639 C3orf84H3BNL1 204 aa10.95□□□□□ -0.66
VRK1-201ENST00000216639 TENM2Q9NT68 2774 aa10.95□□□□□ -0.66
VRK1-201ENST00000216639 IGLV5-48A0A075B6I7 105 aa10.94□□□□□ -0.66
VRK1-201ENST00000216639 SPACA4Q8TDM5 124 aa10.94□□□□□ -0.66
VRK1-201ENST00000216639 LINC01547P58512 204 aaPredicted RBP10.93□□□□□ -0.66
VRK1-201ENST00000216639 UBL5Q9BZL1 73 aa10.93□□□□□ -0.66
VRK1-201ENST00000216639 Q6JHZ5 121 aa10.92□□□□□ -0.66
VRK1-201ENST00000216639 ERC2-IT1O76042 136 aa10.91□□□□□ -0.66
VRK1-201ENST00000216639 PRLHP81277 87 aa10.91□□□□□ -0.66
VRK1-201ENST00000216639 ST20-AS1Q8NBB2 130 aa10.91□□□□□ -0.66
VRK1-201ENST00000216639 IGLV5-52A0A0A0MRZ9 124 aa10.9□□□□□ -0.66
VRK1-201ENST00000216639 H0Y9J4 135 aa10.9□□□□□ -0.66
VRK1-201ENST00000216639 PANO1I0J062 215 aa10.9□□□□□ -0.66
VRK1-201ENST00000216639 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.89□□□□□ -0.67
VRK1-201ENST00000216639 ATP5EP2Q5VTU8 51 aa10.89□□□□□ -0.67
VRK1-201ENST00000216639 EPM2AB3EWF7 344 aa10.88□□□□□ -0.67
VRK1-201ENST00000216639 HIGD2AQ9BW72 106 aa10.88□□□□□ -0.67
VRK1-201ENST00000216639 KRTAP3-3Q9BYR6 98 aa10.88□□□□□ -0.67
VRK1-201ENST00000216639 KRTAP3-2Q9BYR7 98 aa10.88□□□□□ -0.67
VRK1-201ENST00000216639 UBE2AP49459 152 aa10.87□□□□□ -0.67
VRK1-201ENST00000216639 KRTAP11-1Q8IUC1 163 aa10.87□□□□□ -0.67
VRK1-201ENST00000216639 IGKV3D-7A0A0C4DH55 119 aa10.84□□□□□ -0.67
VRK1-201ENST00000216639 BCE1O60756 84 aa10.84□□□□□ -0.67
VRK1-201ENST00000216639 FUSP35637 526 aaKnown RBP eCLIP10.84□□□□□ -0.67
VRK1-201ENST00000216639 C3orf22Q8N5N4 141 aa10.84□□□□□ -0.67
VRK1-201ENST00000216639 TNP2Q05952 138 aa10.84□□□□□ -0.67
VRK1-201ENST00000216639 F8WEM9 126 aa10.83□□□□□ -0.68
VRK1-201ENST00000216639 ANAPC13Q9BS18 74 aa10.81□□□□□ -0.68
VRK1-201ENST00000216639 C1orf137Q5JT78 98 aa10.81□□□□□ -0.68
VRK1-201ENST00000216639 Q6ZVQ6 151 aa10.81□□□□□ -0.68
VRK1-201ENST00000216639 PLAC8Q9NZF1 115 aa10.81□□□□□ -0.68
VRK1-201ENST00000216639 A0A1B0GW54 56 aa10.8□□□□□ -0.68
VRK1-201ENST00000216639 SMIM29Q86T20 159 aa10.78□□□□□ -0.68
VRK1-201ENST00000216639 FAM236AA0A1B0GUQ0 79 aa10.78□□□□□ -0.68
VRK1-201ENST00000216639 FAM236BA0A1B0GV22 79 aa10.78□□□□□ -0.68
VRK1-201ENST00000216639 KMT2AQ03164 3969 aa10.78□□□□□ -0.68
VRK1-201ENST00000216639 HAMPP81172 84 aa10.76□□□□□ -0.69
VRK1-201ENST00000216639 SPRR1BP22528 89 aa10.75□□□□□ -0.69
VRK1-201ENST00000216639 HIST1H4AP62805 103 aaKnown RBP10.75□□□□□ -0.69
VRK1-201ENST00000216639 KRTAP13-1Q8IUC0 172 aa10.75□□□□□ -0.69
VRK1-201ENST00000216639 DNAH6Q9C0G6 4158 aa10.74□□□□□ -0.69
VRK1-201ENST00000216639 CXCL6P80162 114 aa10.74□□□□□ -0.69
VRK1-201ENST00000216639 Q8NBF4 154 aa10.74□□□□□ -0.69
VRK1-201ENST00000216639 A0A1W2PNM2 257 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 79.5 ms