RNA–Protein interactions for RNA: ENST00000215794.7

USP18-201, Transcript of ubiquitin specific peptidase 18, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP18, Length 2,129 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP18-201ENST00000215794 DNAH10Q8IVF4 4471 aa11.82□□□□□ -0.52
USP18-201ENST00000215794 ZNF73O43830 326 aaPredicted RBP11.82□□□□□ -0.52
USP18-201ENST00000215794 FAM19A5Q7Z5A7 132 aaPredicted RBP11.81□□□□□ -0.52
USP18-201ENST00000215794 TMEM256-PLSCR3K7ERE1 68 aa11.81□□□□□ -0.52
USP18-201ENST00000215794 M0R378 163 aa11.81□□□□□ -0.52
USP18-201ENST00000215794 Q6JHZ5 121 aa11.81□□□□□ -0.52
USP18-201ENST00000215794 SERTAD4-AS1Q5TG53 156 aa11.78□□□□□ -0.52
USP18-201ENST00000215794 VPS13DQ5THJ4 4388 aa11.78□□□□□ -0.52
USP18-201ENST00000215794 Q6ZQY7 126 aa11.78□□□□□ -0.52
USP18-201ENST00000215794 KRTAP1-5Q9BYS1 174 aa11.78□□□□□ -0.52
USP18-201ENST00000215794 COX7BP24311 80 aa11.77□□□□□ -0.53
USP18-201ENST00000215794 ELOF1P60002 83 aaKnown RBP11.76□□□□□ -0.53
USP18-201ENST00000215794 RMI2Q96E14 147 aa11.76□□□□□ -0.53
USP18-201ENST00000215794 JMJD7-PLA2G4BH0Y9G9 81 aa11.75□□□□□ -0.53
USP18-201ENST00000215794 TLX1NBP0CAT3 122 aa11.74□□□□□ -0.53
USP18-201ENST00000215794 SERP2Q8N6R1 65 aa11.74□□□□□ -0.53
USP18-201ENST00000215794 LINC00846Q9NV44 126 aa11.74□□□□□ -0.53
USP18-201ENST00000215794 FAM168BA1KXE4 195 aa11.74□□□□□ -0.53
USP18-201ENST00000215794 TMEM258P61165 79 aa11.74□□□□□ -0.53
USP18-201ENST00000215794 CCKP06307 115 aa11.72□□□□□ -0.53
USP18-201ENST00000215794 C3orf84H3BNL1 204 aa11.72□□□□□ -0.53
USP18-201ENST00000215794 NKAPP1Q8N9T2 125 aa11.72□□□□□ -0.53
USP18-201ENST00000215794 C7orf33Q8WU49 177 aa11.72□□□□□ -0.53
USP18-201ENST00000215794 LOC107984640A0A0U1RRK4 108 aa11.71□□□□□ -0.53
USP18-201ENST00000215794 LY6G6CO95867 125 aa11.71□□□□□ -0.53
USP18-201ENST00000215794 HYDINQ4G0P3 5121 aa11.71□□□□□ -0.54
USP18-201ENST00000215794 M0R2N4 97 aa11.71□□□□□ -0.54
USP18-201ENST00000215794 TRBV7-6A0A0J9YX20 115 aa11.7□□□□□ -0.54
USP18-201ENST00000215794 LAMTOR3Q9UHA4 124 aa11.7□□□□□ -0.54
USP18-201ENST00000215794 LINC00528Q8N1L1 170 aa11.69□□□□□ -0.54
USP18-201ENST00000215794 ATP5EP2Q5VTU8 51 aa11.69□□□□□ -0.54
USP18-201ENST00000215794 KRTAP7-1Q8IUC3 87 aa11.68□□□□□ -0.54
USP18-201ENST00000215794 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP11.67□□□□□ -0.54
USP18-201ENST00000215794 ALMS1Q8TCU4 4167 aa11.67□□□□□ -0.54
USP18-201ENST00000215794 RPL37AP8A6NKH3 93 aa11.66□□□□□ -0.54
USP18-201ENST00000215794 RBM3P98179 157 aaKnown RBP11.66□□□□□ -0.54
USP18-201ENST00000215794 KCNQ1DNQ9H478 68 aa11.66□□□□□ -0.54
USP18-201ENST00000215794 LINC00476Q8WZB0 136 aa11.66□□□□□ -0.54
USP18-201ENST00000215794 PLA2G2DQ9UNK4 145 aa11.66□□□□□ -0.54
USP18-201ENST00000215794 IGKV3D-7A0A0C4DH55 119 aa11.64□□□□□ -0.55
USP18-201ENST00000215794 Q6ZQT0 140 aa11.64□□□□□ -0.55
USP18-201ENST00000215794 NBDYA0A0U1RRE5 68 aa11.63□□□□□ -0.55
USP18-201ENST00000215794 DNAH2Q9P225 4427 aa11.62□□□□□ -0.55
USP18-201ENST00000215794 IGLV5-37A0A075B6J1 123 aa11.62□□□□□ -0.55
USP18-201ENST00000215794 PSCAO43653 123 aa11.62□□□□□ -0.55
USP18-201ENST00000215794 DPH3Q96FX2 82 aa11.62□□□□□ -0.55
USP18-201ENST00000215794 SACSQ9NZJ4 4579 aa11.61□□□□□ -0.55
USP18-201ENST00000215794 IGLV1-50A0A075B6I6 118 aa11.6□□□□□ -0.55
USP18-201ENST00000215794 LOC110117498A0A087WWA1 95 aa11.6□□□□□ -0.55
USP18-201ENST00000215794 H3BQ85 93 aa11.59□□□□□ -0.55
USP18-201ENST00000215794 DSCR8Q96T75 97 aa11.59□□□□□ -0.55
USP18-201ENST00000215794 KMT2CQ8NEZ4 4911 aaKnown RBP11.59□□□□□ -0.55
USP18-201ENST00000215794 BCE1O60756 84 aa11.58□□□□□ -0.56
USP18-201ENST00000215794 SEC61GP60059 68 aa11.58□□□□□ -0.56
USP18-201ENST00000215794 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.57□□□□□ -0.56
USP18-201ENST00000215794 MRPL55Q7Z7F7 128 aaKnown RBP11.57□□□□□ -0.56
USP18-201ENST00000215794 A0A096LNI7 61 aa11.57□□□□□ -0.56
USP18-201ENST00000215794 KRTAP4-16G5E9R7 235 aaPredicted RBP11.57□□□□□ -0.56
USP18-201ENST00000215794 PRO0628Q9UI54 55 aa11.57□□□□□ -0.56
USP18-201ENST00000215794 IGKV2-24A0A0C4DH68 120 aa11.56□□□□□ -0.56
USP18-201ENST00000215794 PRYO14603 147 aa11.56□□□□□ -0.56
USP18-201ENST00000215794 DNAH6Q9C0G6 4158 aa11.55□□□□□ -0.56
USP18-201ENST00000215794 Q9BRP9 147 aa11.55□□□□□ -0.56
USP18-201ENST00000215794 SPRR1AP35321 89 aa11.54□□□□□ -0.56
USP18-201ENST00000215794 CNBPP62633 177 aaKnown RBP11.54□□□□□ -0.56
USP18-201ENST00000215794 Q6ZRX8 168 aa11.54□□□□□ -0.56
USP18-201ENST00000215794 DEFB105AQ8NG35 78 aa11.54□□□□□ -0.56
USP18-201ENST00000215794 TRBV7-4A0A0J9YYF1 115 aa11.54□□□□□ -0.56
USP18-201ENST00000215794 GHRHP01286 108 aa11.54□□□□□ -0.56
USP18-201ENST00000215794 A0A087WVE0 104 aa11.53□□□□□ -0.56
USP18-201ENST00000215794 Q6ZR54 194 aa11.53□□□□□ -0.56
USP18-201ENST00000215794 UBL5Q9BZL1 73 aa11.53□□□□□ -0.56
USP18-201ENST00000215794 ETDCA0A1B0GVM5 59 aa11.52□□□□□ -0.57
USP18-201ENST00000215794 FRAS1Q86XX4 4008 aa11.52□□□□□ -0.57
USP18-201ENST00000215794 A0A1W2PNN7 141 aa11.51□□□□□ -0.57
USP18-201ENST00000215794 C16orf90A8MZG2 172 aa11.51□□□□□ -0.57
USP18-201ENST00000215794 LINC01547P58512 204 aaPredicted RBP11.5□□□□□ -0.57
USP18-201ENST00000215794 Q8N377 158 aa11.5□□□□□ -0.57
USP18-201ENST00000215794 CYSTM1Q9H1C7 97 aa11.5□□□□□ -0.57
USP18-201ENST00000215794 Q5XG85 94 aa11.5□□□□□ -0.57
USP18-201ENST00000215794 PDE6GP18545 87 aa11.49□□□□□ -0.57
USP18-201ENST00000215794 Q6ZRN7 208 aaPredicted RBP11.49□□□□□ -0.57
USP18-201ENST00000215794 DHRS4-AS1Q9P1J3 65 aa11.49□□□□□ -0.57
USP18-201ENST00000215794 ST20-AS1Q8NBB2 130 aa11.48□□□□□ -0.57
USP18-201ENST00000215794 CHTF8P0CG12 524 aa11.48□□□□□ -0.57
USP18-201ENST00000215794 LRCOL1A6NCL2 159 aa11.47□□□□□ -0.57
USP18-201ENST00000215794 ERC2-IT1O76042 136 aa11.47□□□□□ -0.57
USP18-201ENST00000215794 HRCT1Q6UXD1 115 aa11.47□□□□□ -0.57
USP18-201ENST00000215794 C4orf26Q17RF5 130 aa11.47□□□□□ -0.57
USP18-201ENST00000215794 REG3GQ6UW15 175 aa11.47□□□□□ -0.57
USP18-201ENST00000215794 LCE6AA0A183 80 aa11.46□□□□□ -0.57
USP18-201ENST00000215794 C14orf177Q52M58 125 aa11.46□□□□□ -0.57
USP18-201ENST00000215794 Q6ZVQ6 151 aa11.46□□□□□ -0.57
USP18-201ENST00000215794 RYR2Q92736 4967 aa11.45□□□□□ -0.58
USP18-201ENST00000215794 FAM19A1Q7Z5A9 133 aa11.45□□□□□ -0.58
USP18-201ENST00000215794 UBE2BP63146 152 aa11.44□□□□□ -0.58
USP18-201ENST00000215794 V9GYY9 64 aa11.44□□□□□ -0.58
USP18-201ENST00000215794 C1orf134Q5TEV5 83 aa11.44□□□□□ -0.58
USP18-201ENST00000215794 TRAV7A0A075B6U4 112 aa11.43□□□□□ -0.58
USP18-201ENST00000215794 FUSP35637 526 aaKnown RBP eCLIP11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 115 ms