RNA–Protein interactions for RNA: ENST00000006053.6

CX3CL1-201, Transcript of C-X3-C motif chemokine ligand 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CX3CL1, Length 3,321 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1-201ENST00000006053 H3BS24 57 aa7.05□□□□□ -1.28
CX3CL1-201ENST00000006053 ZNF73O43830 326 aaPredicted RBP7.05□□□□□ -1.28
CX3CL1-201ENST00000006053 COX7BP24311 80 aa7.05□□□□□ -1.28
CX3CL1-201ENST00000006053 MRPL55Q7Z7F7 128 aaKnown RBP7.05□□□□□ -1.28
CX3CL1-201ENST00000006053 APOC4P55056 127 aa7.04□□□□□ -1.28
CX3CL1-201ENST00000006053 TM2D3Q9BRN9 247 aa7.04□□□□□ -1.28
CX3CL1-201ENST00000006053 NDUFC1O43677 76 aa7.03□□□□□ -1.28
CX3CL1-201ENST00000006053 SPART-AS1P0CW21 52 aa7.03□□□□□ -1.28
CX3CL1-201ENST00000006053 PDE6GP18545 87 aa7.03□□□□□ -1.28
CX3CL1-201ENST00000006053 C9orf66Q5T8R8 295 aa7.03□□□□□ -1.28
CX3CL1-201ENST00000006053 ESRGQ1W209 222 aa7.03□□□□□ -1.28
CX3CL1-201ENST00000006053 Q8NAQ8 132 aa7.03□□□□□ -1.28
CX3CL1-201ENST00000006053 ATP5EP56381 51 aaPredicted RBP7.02□□□□□ -1.28
CX3CL1-201ENST00000006053 CAMK2N2Q96S95 79 aa7.02□□□□□ -1.28
CX3CL1-201ENST00000006053 PRR15Q8IV56 129 aa7.02□□□□□ -1.29
CX3CL1-201ENST00000006053 PRR34Q9NV39 138 aa7.02□□□□□ -1.29
CX3CL1-201ENST00000006053 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.02□□□□□ -1.29
CX3CL1-201ENST00000006053 CXCL6P80162 114 aa7.01□□□□□ -1.29
CX3CL1-201ENST00000006053 GVQW2A0A096LPI5 108 aaPredicted RBP7□□□□□ -1.29
CX3CL1-201ENST00000006053 TRBV7-4A0A0J9YYF1 115 aa7□□□□□ -1.29
CX3CL1-201ENST00000006053 PSPHP1O15172 72 aa7□□□□□ -1.29
CX3CL1-201ENST00000006053 ELOF1P60002 83 aaKnown RBP7□□□□□ -1.29
CX3CL1-201ENST00000006053 H3BQ85 93 aa6.99□□□□□ -1.29
CX3CL1-201ENST00000006053 FUSP35637 526 aaKnown RBP eCLIP6.99□□□□□ -1.29
CX3CL1-201ENST00000006053 Q6ZRU5 148 aa6.99□□□□□ -1.29
CX3CL1-201ENST00000006053 WFDC10BQ8IUB3 73 aa6.99□□□□□ -1.29
CX3CL1-201ENST00000006053 Q8N9L7 120 aa6.99□□□□□ -1.29
CX3CL1-201ENST00000006053 TMEM254Q8TBM7 123 aa6.99□□□□□ -1.29
CX3CL1-201ENST00000006053 VPREB1P12018 145 aa6.99□□□□□ -1.29
CX3CL1-201ENST00000006053 BCE1O60756 84 aa6.98□□□□□ -1.29
CX3CL1-201ENST00000006053 PKD1L1Q8TDX9 2849 aa6.97□□□□□ -1.29
CX3CL1-201ENST00000006053 PRB2P02812 416 aaPredicted RBP6.97□□□□□ -1.29
CX3CL1-201ENST00000006053 NREPQ16612 68 aa6.97□□□□□ -1.29
CX3CL1-201ENST00000006053 M0R378 163 aa6.97□□□□□ -1.29
CX3CL1-201ENST00000006053 DEFB105AQ8NG35 78 aa6.96□□□□□ -1.29
CX3CL1-201ENST00000006053 C3orf84H3BNL1 204 aa6.95□□□□□ -1.3
CX3CL1-201ENST00000006053 EGFEM1PQ0D2K5 195 aa6.95□□□□□ -1.3
CX3CL1-201ENST00000006053 OXLD1Q5BKU9 147 aa6.95□□□□□ -1.3
CX3CL1-201ENST00000006053 RBM12B-AS1Q9P1G2 102 aa6.95□□□□□ -1.3
CX3CL1-201ENST00000006053 LINC00528Q8N1L1 170 aa6.94□□□□□ -1.3
CX3CL1-201ENST00000006053 BPY2O14599 106 aa6.94□□□□□ -1.3
CX3CL1-201ENST00000006053 KPRPQ5T749 579 aaPredicted RBP6.94□□□□□ -1.3
CX3CL1-201ENST00000006053 PRYO14603 147 aa6.94□□□□□ -1.3
CX3CL1-201ENST00000006053 C15orf56Q8N910 161 aa6.93□□□□□ -1.3
CX3CL1-201ENST00000006053 Q6ZRP5 223 aa6.93□□□□□ -1.3
CX3CL1-201ENST00000006053 IGKV2D-24A0A075B6R9 120 aa6.92□□□□□ -1.3
CX3CL1-201ENST00000006053 A8MU10 97 aa6.91□□□□□ -1.3
CX3CL1-201ENST00000006053 KRTAP26-1Q6PEX3 210 aa6.91□□□□□ -1.3
CX3CL1-201ENST00000006053 NKAPP1Q8N9T2 125 aa6.91□□□□□ -1.3
CX3CL1-201ENST00000006053 HIGD2AQ9BW72 106 aa6.91□□□□□ -1.3
CX3CL1-201ENST00000006053 Q6ZTC4 211 aa6.9□□□□□ -1.3
CX3CL1-201ENST00000006053 SPTSSBQ8NFR3 76 aa6.9□□□□□ -1.31
CX3CL1-201ENST00000006053 IGKV4-1P06312 121 aa6.89□□□□□ -1.31
CX3CL1-201ENST00000006053 SYCNQ0VAF6 134 aa6.88□□□□□ -1.31
CX3CL1-201ENST00000006053 TENM3Q9P273 2699 aa6.88□□□□□ -1.31
CX3CL1-201ENST00000006053 SERTAD4-AS1Q5TG53 156 aa6.88□□□□□ -1.31
CX3CL1-201ENST00000006053 PRR4Q16378 134 aa6.88□□□□□ -1.31
CX3CL1-201ENST00000006053 RPL37AP8A6NKH3 93 aa6.87□□□□□ -1.31
CX3CL1-201ENST00000006053 Q8N377 158 aa6.87□□□□□ -1.31
CX3CL1-201ENST00000006053 C7orf33Q8WU49 177 aa6.87□□□□□ -1.31
CX3CL1-201ENST00000006053 KRTAP24-1Q3LI83 254 aa6.87□□□□□ -1.31
CX3CL1-201ENST00000006053 TRAV22A0A0B4J277 110 aa6.86□□□□□ -1.31
CX3CL1-201ENST00000006053 A8MUN3 132 aa6.86□□□□□ -1.31
CX3CL1-201ENST00000006053 hDV103S1A0JD37 113 aa6.85□□□□□ -1.31
CX3CL1-201ENST00000006053 KTN1-AS1Q86SY8 53 aa6.85□□□□□ -1.31
CX3CL1-201ENST00000006053 C1orf64Q8NEQ6 169 aa6.84□□□□□ -1.31
CX3CL1-201ENST00000006053 OCR1Q9BZK8 76 aa6.84□□□□□ -1.31
CX3CL1-201ENST00000006053 KCNQ1DNQ9H478 68 aa6.84□□□□□ -1.31
CX3CL1-201ENST00000006053 FAM30AQ9NZY2 134 aa6.84□□□□□ -1.31
CX3CL1-201ENST00000006053 Q1T7F1 81 aa6.84□□□□□ -1.31
CX3CL1-201ENST00000006053 FAM168BA1KXE4 195 aa6.83□□□□□ -1.32
CX3CL1-201ENST00000006053 SMIM29Q86T20 159 aa6.83□□□□□ -1.32
CX3CL1-201ENST00000006053 ST20-AS1Q8NBB2 130 aa6.83□□□□□ -1.32
CX3CL1-201ENST00000006053 ETDCA0A1B0GVM5 59 aa6.82□□□□□ -1.32
CX3CL1-201ENST00000006053 H3BNG1 76 aa6.82□□□□□ -1.32
CX3CL1-201ENST00000006053 ERC2-IT1O76042 136 aa6.82□□□□□ -1.32
CX3CL1-201ENST00000006053 A0A1W2PNM2 257 aa6.81□□□□□ -1.32
CX3CL1-201ENST00000006053 UBE2BP63146 152 aa6.81□□□□□ -1.32
CX3CL1-201ENST00000006053 C1orf137Q5JT78 98 aa6.81□□□□□ -1.32
CX3CL1-201ENST00000006053 IGLV5-48A0A075B6I7 105 aa6.81□□□□□ -1.32
CX3CL1-201ENST00000006053 DEFB131BA0A096LNP1 70 aa6.81□□□□□ -1.32
CX3CL1-201ENST00000006053 LINC01556Q5JQF7 62 aa6.81□□□□□ -1.32
CX3CL1-201ENST00000006053 CHKB-CPT1BH3BT56 60 aa6.81□□□□□ -1.32
CX3CL1-201ENST00000006053 Q9BRP9 147 aa6.81□□□□□ -1.32
CX3CL1-201ENST00000006053 Q6ZRX8 168 aa6.8□□□□□ -1.32
CX3CL1-201ENST00000006053 DHRS4-AS1Q9P1J3 65 aa6.8□□□□□ -1.32
CX3CL1-201ENST00000006053 LINC00588Q9Y4M8 146 aa6.79□□□□□ -1.32
CX3CL1-201ENST00000006053 C8orf87E5RJ46 101 aa6.79□□□□□ -1.32
CX3CL1-201ENST00000006053 KRTAP10-11P60412 298 aa6.79□□□□□ -1.32
CX3CL1-201ENST00000006053 CASC10Q5T4H9 136 aa6.78□□□□□ -1.32
CX3CL1-201ENST00000006053 PRR26Q8N8Z3 221 aa6.77□□□□□ -1.33
CX3CL1-201ENST00000006053 STAB2Q8WWQ8 2551 aa6.77□□□□□ -1.33
CX3CL1-201ENST00000006053 IGLV1-50A0A075B6I6 118 aa6.77□□□□□ -1.33
CX3CL1-201ENST00000006053 Q8NBF4 154 aa6.77□□□□□ -1.33
CX3CL1-201ENST00000006053 A0A0G2JQZ4 141 aa6.76□□□□□ -1.33
CX3CL1-201ENST00000006053 A0A1W2PNN7 141 aa6.76□□□□□ -1.33
CX3CL1-201ENST00000006053 C16orf90A8MZG2 172 aa6.75□□□□□ -1.33
CX3CL1-201ENST00000006053 KRTAP4-16G5E9R7 235 aaPredicted RBP6.75□□□□□ -1.33
CX3CL1-201ENST00000006053 K7EQZ3 153 aa6.75□□□□□ -1.33
CX3CL1-201ENST00000006053 UBE2AP49459 152 aa6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 90.2 ms