RNA–Protein interactions for RNA: ENSMUST00000200963.3

Scn8a-208, Transcript of Sodium channel protein type 8 subunit alpha, mousemouse

TSL 5 BASIC

Gene Scn8a, Length 5,814 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8a-208ENSMUST00000200963 Stpg1Q9D2F5 341 aa9.63□□□□□ -0.87
Scn8a-208ENSMUST00000200963 Zswim8Q3UHH1 1832 aaKnown RBP9.63□□□□□ -0.87
Scn8a-208ENSMUST00000200963 PigyP0C1P0 71 aa9.62□□□□□ -0.87
Scn8a-208ENSMUST00000200963 Gm10912Q3UXH0 145 aa9.62□□□□□ -0.87
Scn8a-208ENSMUST00000200963 Igkv14-111A0A140T8P9 117 aa9.62□□□□□ -0.87
Scn8a-208ENSMUST00000200963 A0A286YE02 88 aa9.62□□□□□ -0.87
Scn8a-208ENSMUST00000200963 Zfp648D3Z0W3 525 aa9.62□□□□□ -0.87
Scn8a-208ENSMUST00000200963 Igh-VJ558P01758 117 aa9.62□□□□□ -0.87
Scn8a-208ENSMUST00000200963 Gm10447Q3UQ92 135 aa9.62□□□□□ -0.87
Scn8a-208ENSMUST00000200963 Gm9747Q810H1 104 aa9.62□□□□□ -0.87
Scn8a-208ENSMUST00000200963 Fbxl15Q91W61 300 aa9.62□□□□□ -0.87
Scn8a-208ENSMUST00000200963 Rnf126Q91YL2 313 aa9.62□□□□□ -0.87
Scn8a-208ENSMUST00000200963 Ighv1-18A0A0A6YXN4 117 aa9.62□□□□□ -0.87
Scn8a-208ENSMUST00000200963 Ighv1-76A0A0G2JFE9 117 aa9.62□□□□□ -0.87
Scn8a-208ENSMUST00000200963 CrygsO35486 178 aa9.62□□□□□ -0.87
Scn8a-208ENSMUST00000200963 PolP10400 120 aa9.62□□□□□ -0.87
Scn8a-208ENSMUST00000200963 Parm1Q923D3 296 aa9.62□□□□□ -0.87
Scn8a-208ENSMUST00000200963 8030423J24RikQ9CX45 142 aa9.62□□□□□ -0.87
Scn8a-208ENSMUST00000200963 Gm10306Q9CUK2 115 aa9.62□□□□□ -0.87
Scn8a-208ENSMUST00000200963 Igkv3-1A0A075B5P1 119 aa9.62□□□□□ -0.87
Scn8a-208ENSMUST00000200963 P03985 172 aa9.62□□□□□ -0.87
Scn8a-208ENSMUST00000200963 Heatr5bQ8C547 2070 aa9.61□□□□□ -0.87
Scn8a-208ENSMUST00000200963 Igkv13-85A0A075B666 115 aa9.61□□□□□ -0.87
Scn8a-208ENSMUST00000200963 Tmem200bD3Z0P8 284 aa9.61□□□□□ -0.87
Scn8a-208ENSMUST00000200963 Vwc2lQ505H4 222 aa9.61□□□□□ -0.87
Scn8a-208ENSMUST00000200963 Lgals4Q8K419 326 aa9.61□□□□□ -0.87
Scn8a-208ENSMUST00000200963 SNORCQ9CXL7 121 aa9.61□□□□□ -0.87
Scn8a-208ENSMUST00000200963 Cxcl14Q9WUQ5 99 aa9.61□□□□□ -0.87
Scn8a-208ENSMUST00000200963 Trbv12-2A0A0B4J1H1 124 aa9.61□□□□□ -0.87
Scn8a-208ENSMUST00000200963 Gm10521E9PZK0 135 aa9.61□□□□□ -0.87
Scn8a-208ENSMUST00000200963 Gpx1P11352 201 aa9.61□□□□□ -0.87
Scn8a-208ENSMUST00000200963 Tpsab1Q02844 273 aa9.61□□□□□ -0.87
Scn8a-208ENSMUST00000200963 Ssbp2Q9CYZ8 361 aa9.61□□□□□ -0.87
Scn8a-208ENSMUST00000200963 Trav7-1A0A0G2JEV5 112 aa9.61□□□□□ -0.87
Scn8a-208ENSMUST00000200963 Gm15080A2BI02 449 aa9.61□□□□□ -0.87
Scn8a-208ENSMUST00000200963 1700084M14RikB1AT01 78 aa9.61□□□□□ -0.87
Scn8a-208ENSMUST00000200963 Ccl17F6R5P4 103 aa9.61□□□□□ -0.87
Scn8a-208ENSMUST00000200963 Defb26Q30KN7 186 aa9.61□□□□□ -0.87
Scn8a-208ENSMUST00000200963 Jpt2Q6PGH2 190 aaKnown RBP9.61□□□□□ -0.87
Scn8a-208ENSMUST00000200963 Ankrd39Q9D2X0 183 aa9.61□□□□□ -0.87
Scn8a-208ENSMUST00000200963 Tmem52Q9D702 196 aa9.61□□□□□ -0.87
Scn8a-208ENSMUST00000200963 PerpQ9JK95 193 aa9.61□□□□□ -0.87
Scn8a-208ENSMUST00000200963 Gm9513B3GLJ6 99 aa9.6□□□□□ -0.87
Scn8a-208ENSMUST00000200963 Q8R092 253 aa9.6□□□□□ -0.87
Scn8a-208ENSMUST00000200963 Ube2cQ9D1C1 179 aa9.6□□□□□ -0.87
Scn8a-208ENSMUST00000200963 OpalinQ7M750 143 aa9.6□□□□□ -0.87
Scn8a-208ENSMUST00000200963 Ighv1-80A0A075B5Y3 117 aa9.6□□□□□ -0.87
Scn8a-208ENSMUST00000200963 Atp23Q9CWQ3 201 aa9.6□□□□□ -0.87
Scn8a-208ENSMUST00000200963 Insl3O09107 122 aa9.6□□□□□ -0.87
Scn8a-208ENSMUST00000200963 CckP09240 115 aa9.6□□□□□ -0.87
Scn8a-208ENSMUST00000200963 Ear14F6YUX7 155 aa9.6□□□□□ -0.87
Scn8a-208ENSMUST00000200963 GgctQ9D7X8 188 aa9.6□□□□□ -0.87
Scn8a-208ENSMUST00000200963 RttnQ8R4Y8 2226 aa9.59□□□□□ -0.87
Scn8a-208ENSMUST00000200963 Trav9d-1A0A075B699 112 aa9.59□□□□□ -0.87
Scn8a-208ENSMUST00000200963 Gm28269A0A087WSG3 125 aa9.59□□□□□ -0.87
Scn8a-208ENSMUST00000200963 Ighv1-36A0A0A6YXT2 117 aa9.59□□□□□ -0.87
Scn8a-208ENSMUST00000200963 Q8BTC1 67 aa9.59□□□□□ -0.87
Scn8a-208ENSMUST00000200963 Timm21Q8CCM6 249 aa9.59□□□□□ -0.87
Scn8a-208ENSMUST00000200963 Pet100P0DJE0 76 aa9.59□□□□□ -0.87
Scn8a-208ENSMUST00000200963 Trav7-2Q5R1I3 112 aa9.59□□□□□ -0.87
Scn8a-208ENSMUST00000200963 Tmem256Q5F285 113 aa9.59□□□□□ -0.87
Scn8a-208ENSMUST00000200963 Igkv20-101-2A0A0G2JDU3 113 aa9.59□□□□□ -0.87
Scn8a-208ENSMUST00000200963 Shisal2aA2A9G7 189 aa9.59□□□□□ -0.87
Scn8a-208ENSMUST00000200963 Igfbpl1Q80W15 270 aa9.58□□□□□ -0.88
Scn8a-208ENSMUST00000200963 Bcl6bO88282 474 aa9.58□□□□□ -0.88
Scn8a-208ENSMUST00000200963 Ighv1-62-3P01754 117 aa9.58□□□□□ -0.88
Scn8a-208ENSMUST00000200963 Lypd1Q8BLC3 141 aa9.58□□□□□ -0.88
Scn8a-208ENSMUST00000200963 Atg2bQ80XK6 2075 aa9.58□□□□□ -0.88
Scn8a-208ENSMUST00000200963 Igkv9-123A0A140T8N8 117 aa9.58□□□□□ -0.88
Scn8a-208ENSMUST00000200963 Gm6040Q4QY32 63 aa9.58□□□□□ -0.88
Scn8a-208ENSMUST00000200963 Atp6v0e1Q9CQD8 81 aa9.58□□□□□ -0.88
Scn8a-208ENSMUST00000200963 Ang6Q5GAN0 147 aa9.58□□□□□ -0.88
Scn8a-208ENSMUST00000200963 PdpnQ62011 172 aa9.58□□□□□ -0.88
Scn8a-208ENSMUST00000200963 Myo16Q5DU14 1919 aa9.57□□□□□ -0.88
Scn8a-208ENSMUST00000200963 Ighv1-9A0A0A6YW37 117 aa9.57□□□□□ -0.88
Scn8a-208ENSMUST00000200963 Trbv3A0A0A6YYE2 117 aa9.57□□□□□ -0.88
Scn8a-208ENSMUST00000200963 P01802 115 aa9.57□□□□□ -0.88
Scn8a-208ENSMUST00000200963 P04946 108 aa9.57□□□□□ -0.88
Scn8a-208ENSMUST00000200963 Cox6a1P43024 111 aa9.57□□□□□ -0.88
Scn8a-208ENSMUST00000200963 Rpl32P62911 135 aaKnown RBP9.57□□□□□ -0.88
Scn8a-208ENSMUST00000200963 Tctex1d4Q8CDY7 219 aa9.57□□□□□ -0.88
Scn8a-208ENSMUST00000200963 Gm6793B2RXM2 351 aa9.57□□□□□ -0.88
Scn8a-208ENSMUST00000200963 Q80X32 188 aaKnown RBP9.57□□□□□ -0.88
Scn8a-208ENSMUST00000200963 Rnf183Q8QZS5 190 aa9.57□□□□□ -0.88
Scn8a-208ENSMUST00000200963 P01788 123 aa9.57□□□□□ -0.88
Scn8a-208ENSMUST00000200963 Myod1P10085 318 aa9.57□□□□□ -0.88
Scn8a-208ENSMUST00000200963 Tcl1b4P56844 120 aa9.57□□□□□ -0.88
Scn8a-208ENSMUST00000200963 SpinklQ8CEK3 90 aa9.57□□□□□ -0.88
Scn8a-208ENSMUST00000200963 Hbb-bsA8DUK4 147 aa9.57□□□□□ -0.88
Scn8a-208ENSMUST00000200963 Tm4sf19E9Q9H8 206 aa9.57□□□□□ -0.88
Scn8a-208ENSMUST00000200963 Klrd1O54707 179 aa9.57□□□□□ -0.88
Scn8a-208ENSMUST00000200963 Hbb-b1P02088 147 aa9.57□□□□□ -0.88
Scn8a-208ENSMUST00000200963 Q9D8L0 127 aa9.57□□□□□ -0.88
Scn8a-208ENSMUST00000200963 Dock1Q8BUR4 1865 aa9.57□□□□□ -0.88
Scn8a-208ENSMUST00000200963 Ighv1-69A0A0G2JFS5 117 aa9.57□□□□□ -0.88
Scn8a-208ENSMUST00000200963 Colca2F8VPY8 239 aa9.57□□□□□ -0.88
Scn8a-208ENSMUST00000200963 Ly86O88188 162 aa9.57□□□□□ -0.88
Scn8a-208ENSMUST00000200963 SeboxP70368 190 aa9.57□□□□□ -0.88
Scn8a-208ENSMUST00000200963 SlpiP97430 131 aa9.57□□□□□ -0.88
Scn8a-208ENSMUST00000200963 Spaca3Q9D9X8 221 aa9.57□□□□□ -0.88
Retrieved 100 of 22,080 RNA–protein pairs in 57.7 ms