RNA–Protein interactions for RNA: ENSMUST00000109543.8

Vcan-201, Transcript of Versican core protein, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Vcan, Length 2,321 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vcan-201ENSMUST00000109543 Lyzl1Q9CPX3 148 aa12.17□□□□□ -0.46
Vcan-201ENSMUST00000109543 Zfp825A0A1Y7VK00 292 aa12.17□□□□□ -0.46
Vcan-201ENSMUST00000109543 Zfp867E9Q2M4 473 aa12.17□□□□□ -0.46
Vcan-201ENSMUST00000109543 Olfr1336Q8VGH5 314 aa12.17□□□□□ -0.46
Vcan-201ENSMUST00000109543 Atp6v0e1Q9CQD8 81 aa12.17□□□□□ -0.46
Vcan-201ENSMUST00000109543 ManfQ9CXI5 179 aaKnown RBP12.17□□□□□ -0.46
Vcan-201ENSMUST00000109543 Them7Q9DCP4 223 aa12.17□□□□□ -0.46
Vcan-201ENSMUST00000109543 Lrrk2Q5S006 2527 aa12.16□□□□□ -0.46
Vcan-201ENSMUST00000109543 Gm15293D3YX02 93 aa12.16□□□□□ -0.46
Vcan-201ENSMUST00000109543 1500009C09RikD3YYW9 81 aa12.16□□□□□ -0.46
Vcan-201ENSMUST00000109543 Gm10130F6ZHM5 101 aa12.16□□□□□ -0.46
Vcan-201ENSMUST00000109543 Mmp23O88676 391 aa12.16□□□□□ -0.46
Vcan-201ENSMUST00000109543 Znf48Q3US17 591 aa12.16□□□□□ -0.46
Vcan-201ENSMUST00000109543 Olfr1381Q7TQT4 311 aa12.16□□□□□ -0.46
Vcan-201ENSMUST00000109543 Gm5868Q8BJG1 145 aa12.16□□□□□ -0.46
Vcan-201ENSMUST00000109543 Znf641Q8BZ34 422 aa12.16□□□□□ -0.46
Vcan-201ENSMUST00000109543 Fbxl15Q91W61 300 aa12.16□□□□□ -0.46
Vcan-201ENSMUST00000109543 Chchd5Q9CQP3 110 aa12.16□□□□□ -0.46
Vcan-201ENSMUST00000109543 Cep250Q60952 2414 aa12.16□□□□□ -0.46
Vcan-201ENSMUST00000109543 Gm21983D6RFS9 131 aa12.16□□□□□ -0.46
Vcan-201ENSMUST00000109543 Ebi3O35228 228 aa12.16□□□□□ -0.46
Vcan-201ENSMUST00000109543 Saa3P04918 122 aa12.16□□□□□ -0.46
Vcan-201ENSMUST00000109543 Spint3Q3UW09 88 aa12.16□□□□□ -0.46
Vcan-201ENSMUST00000109543 Olfr149Q60888 311 aa12.16□□□□□ -0.46
Vcan-201ENSMUST00000109543 Necap1Q9CR95 275 aa12.16□□□□□ -0.46
Vcan-201ENSMUST00000109543 Foxj2Q9ES18 565 aa12.16□□□□□ -0.46
Vcan-201ENSMUST00000109543 Prrc2cQ3TLH4 2846 aaKnown RBP12.15□□□□□ -0.46
Vcan-201ENSMUST00000109543 Ighv3-1A0A075B5S6 116 aa12.15□□□□□ -0.46
Vcan-201ENSMUST00000109543 Shisal2aA2A9G7 189 aa12.15□□□□□ -0.46
Vcan-201ENSMUST00000109543 Arl11Q6P3A9 176 aa12.15□□□□□ -0.46
Vcan-201ENSMUST00000109543 Olfr1465Q7TQR2 307 aa12.15□□□□□ -0.46
Vcan-201ENSMUST00000109543 Ndfip1Q8R0W6 221 aa12.15□□□□□ -0.46
Vcan-201ENSMUST00000109543 Olfr810Q8VFH9 312 aa12.15□□□□□ -0.46
Vcan-201ENSMUST00000109543 Golt1bQ9CR60 138 aa12.15□□□□□ -0.46
Vcan-201ENSMUST00000109543 Trdv1A0A075B657 112 aa12.15□□□□□ -0.46
Vcan-201ENSMUST00000109543 Fgf5P15656 264 aa12.15□□□□□ -0.46
Vcan-201ENSMUST00000109543 Fam103a1Q9CQY2 119 aaKnown RBP12.15□□□□□ -0.46
Vcan-201ENSMUST00000109543 Tmem210Q9D2F0 147 aa12.15□□□□□ -0.46
Vcan-201ENSMUST00000109543 Svep1A2AVA0 3567 aa12.14□□□□□ -0.47
Vcan-201ENSMUST00000109543 Ighv1-77A0A0G2JGS9 117 aa12.14□□□□□ -0.47
Vcan-201ENSMUST00000109543 Vmn1r119E9Q4H3 307 aa12.14□□□□□ -0.47
Vcan-201ENSMUST00000109543 Gm15056F6ZR08 88 aa12.14□□□□□ -0.47
Vcan-201ENSMUST00000109543 Ccl6P27784 116 aa12.14□□□□□ -0.47
Vcan-201ENSMUST00000109543 NrgnP60761 78 aa12.14□□□□□ -0.47
Vcan-201ENSMUST00000109543 Ripply2Q2WG76 128 aa12.14□□□□□ -0.47
Vcan-201ENSMUST00000109543 Minos1Q7TNS2 76 aa12.14□□□□□ -0.47
Vcan-201ENSMUST00000109543 Pam16Q9CQV1 125 aa12.14□□□□□ -0.47
Vcan-201ENSMUST00000109543 CcsQ9WU84 274 aa12.14□□□□□ -0.47
Vcan-201ENSMUST00000109543 Olfr1185-ps1F6XP16 303 aa12.14□□□□□ -0.47
Vcan-201ENSMUST00000109543 Acrv1P50289 261 aa12.14□□□□□ -0.47
Vcan-201ENSMUST00000109543 Mbd3l2Q3UXB0 228 aa12.14□□□□□ -0.47
Vcan-201ENSMUST00000109543 Olfr904Q7TRC9 310 aa12.14□□□□□ -0.47
Vcan-201ENSMUST00000109543 Znf787Q8BIF9 381 aa12.14□□□□□ -0.47
Vcan-201ENSMUST00000109543 Tmem91Q8C581 172 aa12.14□□□□□ -0.47
Vcan-201ENSMUST00000109543 Ifi27Q8C6G0 260 aa12.14□□□□□ -0.47
Vcan-201ENSMUST00000109543 Tmem189Q99LQ7 271 aa12.14□□□□□ -0.47
Vcan-201ENSMUST00000109543 Slc31a2Q9CPU9 143 aa12.14□□□□□ -0.47
Vcan-201ENSMUST00000109543 Prr23a3Q9CWP9 254 aa12.14□□□□□ -0.47
Vcan-201ENSMUST00000109543 Q9CX25 107 aa12.14□□□□□ -0.47
Vcan-201ENSMUST00000109543 Fxyd4Q9D2W0 88 aa12.14□□□□□ -0.47
Vcan-201ENSMUST00000109543 Abca1P41233 2261 aa12.13□□□□□ -0.47
Vcan-201ENSMUST00000109543 Gm20379A0A087WR34 119 aa12.13□□□□□ -0.47
Vcan-201ENSMUST00000109543 Aqp7O54794 303 aa12.13□□□□□ -0.47
Vcan-201ENSMUST00000109543 RnasekQ8K3C0 98 aa12.13□□□□□ -0.47
Vcan-201ENSMUST00000109543 Fam208bQ5DTT3 2382 aa12.13□□□□□ -0.47
Vcan-201ENSMUST00000109543 Gm6525A0A0A6YW33 106 aa12.12□□□□□ -0.47
Vcan-201ENSMUST00000109543 Rtl10D3YWW5 146 aa12.12□□□□□ -0.47
Vcan-201ENSMUST00000109543 Fbln7Q501P1 440 aa12.12□□□□□ -0.47
Vcan-201ENSMUST00000109543 Sox21Q811W0 276 aa12.12□□□□□ -0.47
Vcan-201ENSMUST00000109543 Tmem140Q8BGY5 185 aa12.12□□□□□ -0.47
Vcan-201ENSMUST00000109543 Pla2g2eQ9QUL3 142 aa12.12□□□□□ -0.47
Vcan-201ENSMUST00000109543 Gm5294J3QP53 216 aa12.12□□□□□ -0.47
Vcan-201ENSMUST00000109543 Gm3512L7N206 146 aa12.12□□□□□ -0.47
Vcan-201ENSMUST00000109543 Pmp2P24526 132 aa12.12□□□□□ -0.47
Vcan-201ENSMUST00000109543 Pde6hP61249 83 aa12.12□□□□□ -0.47
Vcan-201ENSMUST00000109543 Taf15Q8BQ46 557 aaKnown RBP12.12□□□□□ -0.47
Vcan-201ENSMUST00000109543 Olfr1323Q8VF35 309 aa12.12□□□□□ -0.47
Vcan-201ENSMUST00000109543 Kmt2bO08550 2713 aa12.12□□□□□ -0.47
Vcan-201ENSMUST00000109543 Trav6d-7A0A075B6B0 112 aa12.11□□□□□ -0.47
Vcan-201ENSMUST00000109543 Ighv1-20A0A0A6YX66 117 aa12.11□□□□□ -0.47
Vcan-201ENSMUST00000109543 Tnfsf15Q5UBV8 252 aa12.11□□□□□ -0.47
Vcan-201ENSMUST00000109543 Q9CR34 168 aa12.11□□□□□ -0.47
Vcan-201ENSMUST00000109543 ChtopQ9CY57 249 aaKnown RBP12.11□□□□□ -0.47
Vcan-201ENSMUST00000109543 Hcfc2Q9D968 241 aa12.11□□□□□ -0.47
Vcan-201ENSMUST00000109543 Tmem89Q9DA04 169 aa12.11□□□□□ -0.47
Vcan-201ENSMUST00000109543 Plpp2Q9DAX2 276 aa12.11□□□□□ -0.47
Vcan-201ENSMUST00000109543 RhogP84096 191 aa12.11□□□□□ -0.47
Vcan-201ENSMUST00000109543 Mrpl33Q9CQP0 65 aa12.11□□□□□ -0.47
Vcan-201ENSMUST00000109543 HeylQ9DBX7 326 aa12.11□□□□□ -0.47
Vcan-201ENSMUST00000109543 Csmd2V9GX34 3611 aa12.11□□□□□ -0.47
Vcan-201ENSMUST00000109543 Txn2P97493 166 aa12.1□□□□□ -0.47
Vcan-201ENSMUST00000109543 Ttc28Q80XJ3 2450 aa12.1□□□□□ -0.47
Vcan-201ENSMUST00000109543 Gm17727E9Q4V7 109 aa12.1□□□□□ -0.47
Vcan-201ENSMUST00000109543 Gm6871L7N248 545 aa12.1□□□□□ -0.47
Vcan-201ENSMUST00000109543 Tnfsf18Q7TS55 173 aa12.1□□□□□ -0.47
Vcan-201ENSMUST00000109543 GlmpQ9JHJ3 404 aa12.1□□□□□ -0.47
Vcan-201ENSMUST00000109543 Brs3O54798 399 aa12.09□□□□□ -0.47
Vcan-201ENSMUST00000109543 P01724 129 aa12.09□□□□□ -0.47
Vcan-201ENSMUST00000109543 5930422O12RikQ8C4Y4 123 aa12.09□□□□□ -0.47
Vcan-201ENSMUST00000109543 Stxbp6Q8R3T5 210 aa12.09□□□□□ -0.47
Retrieved 100 of 22,080 RNA–protein pairs in 47.1 ms