RNA–Protein interactions for RNA: ENST00000618440.1

U6.42-201, humanhuman

BASIC

Gene U6, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U6.42-201ENST00000618440 SETD2Q9BYW2 2564 aaPredicted RBP-0.76□□□□□ -2.53
U6.42-201ENST00000618440 GNGT2O14610 69 aa-0.76□□□□□ -2.53
U6.42-201ENST00000618440 MT-ATP8P03928 68 aa-0.76□□□□□ -2.53
U6.42-201ENST00000618440 PMCHL1Q16048 86 aa-0.76□□□□□ -2.53
U6.42-201ENST00000618440 C14orf144Q96I85 54 aa-0.76□□□□□ -2.53
U6.42-201ENST00000618440 TRGV9Q99603 122 aa-0.76□□□□□ -2.53
U6.42-201ENST00000618440 VAMP8Q9BV40 100 aa-0.76□□□□□ -2.53
U6.42-201ENST00000618440 ADAMTS12P58397 1594 aa-0.76□□□□□ -2.53
U6.42-201ENST00000618440 PTPN23Q9H3S7 1636 aa-0.77□□□□□ -2.53
U6.42-201ENST00000618440 MPC2O95563 127 aa-0.77□□□□□ -2.53
U6.42-201ENST00000618440 DEFB135Q30KP9 77 aa-0.77□□□□□ -2.53
U6.42-201ENST00000618440 NBEAL1Q6ZS30 2694 aa-0.77□□□□□ -2.53
U6.42-201ENST00000618440 FSIP2Q5CZC0 6907 aa-0.78□□□□□ -2.53
U6.42-201ENST00000618440 TEX14Q8IWB6 1497 aa-0.78□□□□□ -2.53
U6.42-201ENST00000618440 I3L3M4 83 aa-0.78□□□□□ -2.53
U6.42-201ENST00000618440 UQCRHP07919 91 aa-0.78□□□□□ -2.53
U6.42-201ENST00000618440 MRPL34Q9BQ48 92 aaKnown RBP-0.78□□□□□ -2.53
U6.42-201ENST00000618440 PMCHL2Q9BQD1 86 aa-0.78□□□□□ -2.53
U6.42-201ENST00000618440 MYH4Q9Y623 1939 aa-0.78□□□□□ -2.53
U6.42-201ENST00000618440 LAMA5O15230 3695 aa-0.79□□□□□ -2.54
U6.42-201ENST00000618440 ARMS2P0C7Q2 107 aa-0.79□□□□□ -2.54
U6.42-201ENST00000618440 SPRR2EP22531 72 aa-0.79□□□□□ -2.54
U6.42-201ENST00000618440 S100PP25815 95 aa-0.79□□□□□ -2.54
U6.42-201ENST00000618440 UBR1Q8IWV7 1749 aa-0.79□□□□□ -2.54
U6.42-201ENST00000618440 CNTLNQ9NXG0 1405 aa-0.8□□□□□ -2.54
U6.42-201ENST00000618440 PREX1Q8TCU6 1659 aa-0.8□□□□□ -2.54
U6.42-201ENST00000618440 TMEM218A2RU14 115 aa-0.8□□□□□ -2.54
U6.42-201ENST00000618440 ATOX1O00244 68 aa-0.8□□□□□ -2.54
U6.42-201ENST00000618440 GNGT1P63211 74 aa-0.8□□□□□ -2.54
U6.42-201ENST00000618440 LELP1Q5T871 98 aa-0.8□□□□□ -2.54
U6.42-201ENST00000618440 SERP2Q8N6R1 65 aa-0.8□□□□□ -2.54
U6.42-201ENST00000618440 EPRSP07814 1512 aaKnown RBP-0.8□□□□□ -2.54
U6.42-201ENST00000618440 GPR98Q8WXG9 6306 aa-0.81□□□□□ -2.54
U6.42-201ENST00000618440 TRAV30A0A087WSZ9 112 aa-0.81□□□□□ -2.54
U6.42-201ENST00000618440 C9orf62Q8N4C0 152 aa-0.81□□□□□ -2.54
U6.42-201ENST00000618440 DSTQ03001 7570 aaKnown RBP-0.81□□□□□ -2.54
U6.42-201ENST00000618440 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP-0.81□□□□□ -2.54
U6.42-201ENST00000618440 AKAP12Q02952 1782 aa-0.81□□□□□ -2.54
U6.42-201ENST00000618440 FANCAO15360 1455 aa-0.81□□□□□ -2.54
U6.42-201ENST00000618440 KNL1Q8NG31 2342 aa-0.82□□□□□ -2.54
U6.42-201ENST00000618440 S100A10P60903 97 aa-0.82□□□□□ -2.54
U6.42-201ENST00000618440 KRTAP19-8Q3LI54 63 aa-0.82□□□□□ -2.54
U6.42-201ENST00000618440 REV3LO60673 3130 aa-0.82□□□□□ -2.54
U6.42-201ENST00000618440 MYO3AQ8NEV4 1616 aa-0.82□□□□□ -2.54
U6.42-201ENST00000618440 SYNE2Q8WXH0 6885 aaKnown RBP-0.83□□□□□ -2.54
U6.42-201ENST00000618440 RGPD1P0DJD0 1748 aa-0.83□□□□□ -2.54
U6.42-201ENST00000618440 KMT2CQ8NEZ4 4911 aaKnown RBP-0.83□□□□□ -2.54
U6.42-201ENST00000618440 TCEAL7Q9BRU2 100 aa-0.83□□□□□ -2.54
U6.42-201ENST00000618440 TRBV7-7A0A0K0K1E9 115 aa-0.84□□□□□ -2.54
U6.42-201ENST00000618440 CCL22O00626 93 aa-0.84□□□□□ -2.54
U6.42-201ENST00000618440 TIAM2Q8IVF5 1701 aa-0.84□□□□□ -2.54
U6.42-201ENST00000618440 NBASA2RRP1 2371 aa-0.84□□□□□ -2.54
U6.42-201ENST00000618440 CICQ96RK0 1608 aaPredicted RBP-0.85□□□□□ -2.55
U6.42-201ENST00000618440 PKD1P98161 4303 aa-0.85□□□□□ -2.55
U6.42-201ENST00000618440 SPTY2D1-AS1A0A0U1RR47 76 aa-0.85□□□□□ -2.55
U6.42-201ENST00000618440 ATP6V1G2-DDX39BF2Z307 99 aa-0.85□□□□□ -2.55
U6.42-201ENST00000618440 C4AP0C0L4 1744 aa-0.85□□□□□ -2.55
U6.42-201ENST00000618440 C4BP0C0L5 1744 aa-0.85□□□□□ -2.55
U6.42-201ENST00000618440 DEFB112Q30KQ8 113 aa-0.85□□□□□ -2.55
U6.42-201ENST00000618440 SUPT6HQ7KZ85 1726 aaKnown RBP-0.85□□□□□ -2.55
U6.42-201ENST00000618440 PSENENQ9NZ42 101 aa-0.85□□□□□ -2.55
U6.42-201ENST00000618440 MAGI2Q86UL8 1455 aa-0.86□□□□□ -2.55
U6.42-201ENST00000618440 CLIP1P30622 1438 aa-0.86□□□□□ -2.55
U6.42-201ENST00000618440 RBP2P50120 134 aa-0.86□□□□□ -2.55
U6.42-201ENST00000618440 HMGN3Q15651 99 aa-0.86□□□□□ -2.55
U6.42-201ENST00000618440 ETDBQ3ZM63 59 aa-0.86□□□□□ -2.55
U6.42-201ENST00000618440 TGP01266 2768 aa-0.87□□□□□ -2.55
U6.42-201ENST00000618440 F8WEM9 126 aa-0.87□□□□□ -2.55
U6.42-201ENST00000618440 IGLC2P0DOY2 106 aa-0.87□□□□□ -2.55
U6.42-201ENST00000618440 IGLC3P0DOY3 106 aa-0.87□□□□□ -2.55
U6.42-201ENST00000618440 AP4S1Q9Y587 144 aa-0.87□□□□□ -2.55
U6.42-201ENST00000618440 SPTBN4Q9H254 2564 aa-0.87□□□□□ -2.55
U6.42-201ENST00000618440 RGPD8O14715 1765 aaPredicted RBP-0.88□□□□□ -2.55
U6.42-201ENST00000618440 RGPD5Q99666 1765 aa-0.88□□□□□ -2.55
U6.42-201ENST00000618440 UBE2D4Q9Y2X8 147 aa-0.88□□□□□ -2.55
U6.42-201ENST00000618440 UBR3Q6ZT12 1888 aa-0.88□□□□□ -2.55
U6.42-201ENST00000618440 HERC1Q15751 4861 aa-0.89□□□□□ -2.55
U6.42-201ENST00000618440 POLR1AO95602 1720 aaPredicted RBP-0.89□□□□□ -2.55
U6.42-201ENST00000618440 LINC00032P0C843 101 aa-0.89□□□□□ -2.55
U6.42-201ENST00000618440 WFDC13Q8IUB5 93 aa-0.89□□□□□ -2.55
U6.42-201ENST00000618440 ACBD7Q8N6N7 88 aa-0.89□□□□□ -2.55
U6.42-201ENST00000618440 DPY30Q9C005 99 aa-0.89□□□□□ -2.55
U6.42-201ENST00000618440 ATP10BO94823 1461 aa-0.89□□□□□ -2.55
U6.42-201ENST00000618440 ABCC10Q5T3U5 1492 aa-0.89□□□□□ -2.55
U6.42-201ENST00000618440 LRRC7Q96NW7 1537 aa-0.89□□□□□ -2.55
U6.42-201ENST00000618440 VPS8Q8N3P4 1428 aa-0.89□□□□□ -2.55
U6.42-201ENST00000618440 RGPD4Q7Z3J3 1758 aa-0.9□□□□□ -2.55
U6.42-201ENST00000618440 TNRC6CQ9HCJ0 1690 aaKnown RBP-0.9□□□□□ -2.55
U6.42-201ENST00000618440 SONP18583 2426 aaKnown RBP-0.9□□□□□ -2.55
U6.42-201ENST00000618440 UQCRHLA0A096LP55 91 aa-0.9□□□□□ -2.55
U6.42-201ENST00000618440 ALKAL2Q6UX46 152 aa-0.9□□□□□ -2.55
U6.42-201ENST00000618440 ZNF720Q7Z2F6 126 aa-0.9□□□□□ -2.55
U6.42-201ENST00000618440 HIGD1BQ9P298 99 aa-0.9□□□□□ -2.55
U6.42-201ENST00000618440 CDKN2A-AS1Q9UH64 79 aa-0.9□□□□□ -2.55
U6.42-201ENST00000618440 PCLOQ9Y6V0 5065 aa-0.9□□□□□ -2.55
U6.42-201ENST00000618440 CREBBPQ92793 2442 aa-0.9□□□□□ -2.55
U6.42-201ENST00000618440 D6R8Y8 96 aa-0.91□□□□□ -2.56
U6.42-201ENST00000618440 COL5A1-AS1Q5SY13 56 aa-0.91□□□□□ -2.56
U6.42-201ENST00000618440 NCMAPQ5T1S8 102 aa-0.91□□□□□ -2.56
U6.42-201ENST00000618440 HEPN1Q6WQI6 88 aa-0.91□□□□□ -2.56
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms