RNA–Protein interactions for RNA: ENST00000584897.5

SMCHD1-211, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 2

Gene SMCHD1, Length 4,143 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-211ENST00000584897 MUC2Q02817 5179 aa1.22□□□□□ -2.21
SMCHD1-211ENST00000584897 A0A087WX48 190 aa1.21□□□□□ -2.21
SMCHD1-211ENST00000584897 GVQW2A0A096LPI5 108 aaPredicted RBP1.21□□□□□ -2.21
SMCHD1-211ENST00000584897 TRAV12-1A0A0B4J245 112 aa1.21□□□□□ -2.21
SMCHD1-211ENST00000584897 TRAV12-3A0A0B4J271 114 aa1.21□□□□□ -2.21
SMCHD1-211ENST00000584897 HIST1H2BOP23527 126 aa1.21□□□□□ -2.21
SMCHD1-211ENST00000584897 HIST1H2BBP33778 126 aa1.21□□□□□ -2.21
SMCHD1-211ENST00000584897 HIST1H2BDP58876 126 aa1.21□□□□□ -2.21
SMCHD1-211ENST00000584897 HIST1H2BCP62807 126 aa1.21□□□□□ -2.21
SMCHD1-211ENST00000584897 HIST2H2BEQ16778 126 aa1.21□□□□□ -2.21
SMCHD1-211ENST00000584897 SPINK13Q1W4C9 94 aa1.21□□□□□ -2.21
SMCHD1-211ENST00000584897 KIAA2026Q5HYC2 2103 aa1.21□□□□□ -2.21
SMCHD1-211ENST00000584897 HIST2H2BFQ5QNW6 126 aaPredicted RBP1.21□□□□□ -2.21
SMCHD1-211ENST00000584897 CFAP126Q5VTH2 177 aa1.21□□□□□ -2.21
SMCHD1-211ENST00000584897 FAM104BQ5XKR9 115 aa1.21□□□□□ -2.21
SMCHD1-211ENST00000584897 AMMECR1LQ6DCA0 310 aa1.21□□□□□ -2.21
SMCHD1-211ENST00000584897 SMIM20Q8N5G0 67 aa1.21□□□□□ -2.21
SMCHD1-211ENST00000584897 HIST1H2BHQ93079 126 aa1.21□□□□□ -2.21
SMCHD1-211ENST00000584897 HIST1H2BNQ99877 126 aa1.21□□□□□ -2.21
SMCHD1-211ENST00000584897 HIST1H2BMQ99879 126 aa1.21□□□□□ -2.21
SMCHD1-211ENST00000584897 MRPL36Q9P0J6 103 aaKnown RBP1.21□□□□□ -2.21
SMCHD1-211ENST00000584897 TP73-AS1Q9UF72 201 aa1.21□□□□□ -2.21
SMCHD1-211ENST00000584897 CYSLTR1Q9Y271 337 aa1.21□□□□□ -2.21
SMCHD1-211ENST00000584897 MED12Q93074 2177 aa1.21□□□□□ -2.22
SMCHD1-211ENST00000584897 APOBP04114 4563 aaKnown RBP1.21□□□□□ -2.22
SMCHD1-211ENST00000584897 TRBV6-8A0A0A6YYG3 113 aa1.21□□□□□ -2.22
SMCHD1-211ENST00000584897 FAM236DA0A1B0GTK5 79 aa1.21□□□□□ -2.22
SMCHD1-211ENST00000584897 NPYP01303 97 aa1.21□□□□□ -2.22
SMCHD1-211ENST00000584897 ARMS2P0C7Q2 107 aa1.21□□□□□ -2.22
SMCHD1-211ENST00000584897 FAM236CP0DP71 79 aa1.21□□□□□ -2.22
SMCHD1-211ENST00000584897 CNBPP62633 177 aaKnown RBP1.21□□□□□ -2.22
SMCHD1-211ENST00000584897 SPINK9Q5DT21 86 aa1.21□□□□□ -2.22
SMCHD1-211ENST00000584897 OR10AG1Q8NH19 301 aa1.21□□□□□ -2.22
SMCHD1-211ENST00000584897 SMIM3Q9BZL3 60 aa1.21□□□□□ -2.22
SMCHD1-211ENST00000584897 ABCA1O95477 2261 aa1.21□□□□□ -2.22
SMCHD1-211ENST00000584897 AGRNO00468 2067 aa1.21□□□□□ -2.22
SMCHD1-211ENST00000584897 TRAV26-2A0A0B4J265 109 aa1.21□□□□□ -2.22
SMCHD1-211ENST00000584897 C7orf77A4D0Y5 90 aa1.21□□□□□ -2.22
SMCHD1-211ENST00000584897 PYYP10082 97 aa1.21□□□□□ -2.22
SMCHD1-211ENST00000584897 GNG5P63218 68 aa1.21□□□□□ -2.22
SMCHD1-211ENST00000584897 ZNF56Q15929 161 aa1.21□□□□□ -2.22
SMCHD1-211ENST00000584897 PMCHL2Q9BQD1 86 aa1.21□□□□□ -2.22
SMCHD1-211ENST00000584897 SS18L2Q9UHA2 77 aa1.21□□□□□ -2.22
SMCHD1-211ENST00000584897 IGHV3-64A0A075B6Q5 118 aa1.21□□□□□ -2.22
SMCHD1-211ENST00000584897 INAFM2P0DMQ5 153 aa1.21□□□□□ -2.22
SMCHD1-211ENST00000584897 RPL37AP61513 92 aaKnown RBP1.21□□□□□ -2.22
SMCHD1-211ENST00000584897 C10orf99Q6UWK7 81 aa1.21□□□□□ -2.22
SMCHD1-211ENST00000584897 LYPD5Q6UWN5 251 aa1.21□□□□□ -2.22
SMCHD1-211ENST00000584897 ZNF664Q8N3J9 261 aa1.21□□□□□ -2.22
SMCHD1-211ENST00000584897 PPDPFLQ8WWR9 84 aa1.21□□□□□ -2.22
SMCHD1-211ENST00000584897 TOMM6Q96B49 74 aa1.21□□□□□ -2.22
SMCHD1-211ENST00000584897 PLEKHB2Q96CS7 222 aa1.21□□□□□ -2.22
SMCHD1-211ENST00000584897 SCGB3A1Q96QR1 104 aa1.21□□□□□ -2.22
SMCHD1-211ENST00000584897 NOP10Q9NPE3 64 aaKnown RBP1.21□□□□□ -2.22
SMCHD1-211ENST00000584897 S4R3C0 116 aa1.21□□□□□ -2.22
SMCHD1-211ENST00000584897 IGKV2-40A0A087WW87 121 aaPredicted RBP1.2□□□□□ -2.22
SMCHD1-211ENST00000584897 TIMM17BO60830 172 aa1.2□□□□□ -2.22
SMCHD1-211ENST00000584897 IGKV2D-40P01614 121 aaPredicted RBP1.2□□□□□ -2.22
SMCHD1-211ENST00000584897 CKS2P33552 79 aa1.2□□□□□ -2.22
SMCHD1-211ENST00000584897 MRPL51Q4U2R6 128 aaKnown RBP1.2□□□□□ -2.22
SMCHD1-211ENST00000584897 KRTAP5-4Q6L8H1 288 aa1.2□□□□□ -2.22
SMCHD1-211ENST00000584897 EXOC3-AS1Q8N2X6 119 aa1.2□□□□□ -2.22
SMCHD1-211ENST00000584897 ZC2HC1AQ96GY0 325 aa1.2□□□□□ -2.22
SMCHD1-211ENST00000584897 DERL1Q9BUN8 251 aa1.2□□□□□ -2.22
SMCHD1-211ENST00000584897 AKAP6Q13023 2319 aa1.2□□□□□ -2.22
SMCHD1-211ENST00000584897 LOC107984640A0A0U1RRK4 108 aa1.2□□□□□ -2.22
SMCHD1-211ENST00000584897 A8MWP4 228 aa1.2□□□□□ -2.22
SMCHD1-211ENST00000584897 RNASE3P12724 160 aaKnown RBP1.2□□□□□ -2.22
SMCHD1-211ENST00000584897 FABP4P15090 132 aa1.2□□□□□ -2.22
SMCHD1-211ENST00000584897 PLNP26678 52 aa1.2□□□□□ -2.22
SMCHD1-211ENST00000584897 POLR2KP53803 58 aaKnown RBP1.2□□□□□ -2.22
SMCHD1-211ENST00000584897 CIRBPQ14011 172 aaKnown RBP1.2□□□□□ -2.22
SMCHD1-211ENST00000584897 BAGE3Q86Y29 109 aa1.2□□□□□ -2.22
SMCHD1-211ENST00000584897 IMUPQ9GZP8 106 aa1.2□□□□□ -2.22
SMCHD1-211ENST00000584897 XAGE1AQ9HD64 81 aa1.2□□□□□ -2.22
SMCHD1-211ENST00000584897 NHP2Q9NX24 153 aaKnown RBP1.2□□□□□ -2.22
SMCHD1-211ENST00000584897 A0A096LPF7 62 aa1.2□□□□□ -2.22
SMCHD1-211ENST00000584897 M0QY20 66 aa1.2□□□□□ -2.22
SMCHD1-211ENST00000584897 IGLV6-57P01721 117 aa1.2□□□□□ -2.22
SMCHD1-211ENST00000584897 APELAP0DMC3 54 aa1.2□□□□□ -2.22
SMCHD1-211ENST00000584897 TSPEAR-AS2P59090 65 aa1.2□□□□□ -2.22
SMCHD1-211ENST00000584897 ADIRFQ15847 76 aa1.2□□□□□ -2.22
SMCHD1-211ENST00000584897 Q6Q795 121 aa1.2□□□□□ -2.22
SMCHD1-211ENST00000584897 CST9LQ9H4G1 147 aa1.2□□□□□ -2.22
SMCHD1-211ENST00000584897 MRPL35Q9NZE8 188 aaKnown RBP1.2□□□□□ -2.22
SMCHD1-211ENST00000584897 V9GYV3 84 aa1.2□□□□□ -2.22
SMCHD1-211ENST00000584897 H3BT86 120 aa1.19□□□□□ -2.22
SMCHD1-211ENST00000584897 PRM2P04554 102 aa1.19□□□□□ -2.22
SMCHD1-211ENST00000584897 SFTA3P0C7M3 94 aa1.19□□□□□ -2.22
SMCHD1-211ENST00000584897 IFITM1P13164 125 aa1.19□□□□□ -2.22
SMCHD1-211ENST00000584897 KRTAP5-9P26371 169 aa1.19□□□□□ -2.22
SMCHD1-211ENST00000584897 SPATA12Q7Z6I5 190 aa1.19□□□□□ -2.22
SMCHD1-211ENST00000584897 Q8IZM0 81 aa1.19□□□□□ -2.22
SMCHD1-211ENST00000584897 HIST3H2BBQ8N257 126 aa1.19□□□□□ -2.22
SMCHD1-211ENST00000584897 C15orf56Q8N910 161 aa1.19□□□□□ -2.22
SMCHD1-211ENST00000584897 ST20-AS1Q8NBB2 130 aa1.19□□□□□ -2.22
SMCHD1-211ENST00000584897 C1orf64Q8NEQ6 169 aa1.19□□□□□ -2.22
SMCHD1-211ENST00000584897 PRELID3AQ96N28 172 aa1.19□□□□□ -2.22
SMCHD1-211ENST00000584897 SPANXCQ9NY87 97 aa1.19□□□□□ -2.22
SMCHD1-211ENST00000584897 TRBV7-6A0A0J9YX20 115 aa1.19□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 189.4 ms