RNA–Protein interactions for RNA: ENST00000580019.1

KPNB1-208, Transcript of karyopherin subunit beta 1, humanhuman

TSL 2

Gene KPNB1, Length 427 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNB1-208ENST00000580019 SCP2D1Q9UJQ7 156 aa1.61□□□□□ -2.15
KPNB1-208ENST00000580019 KLK9Q9UKQ9 250 aa1.61□□□□□ -2.15
KPNB1-208ENST00000580019 DNAH2Q9P225 4427 aa1.61□□□□□ -2.15
KPNB1-208ENST00000580019 WNK2Q9Y3S1 2297 aa1.6□□□□□ -2.15
KPNB1-208ENST00000580019 TRBV10-1A0A0K0K1A3 114 aa1.6□□□□□ -2.15
KPNB1-208ENST00000580019 TRBV10-3A0A0K0K1G6 114 aa1.6□□□□□ -2.15
KPNB1-208ENST00000580019 TRBV6-4A0A1B0GX49 114 aa1.6□□□□□ -2.15
KPNB1-208ENST00000580019 C9orf116Q5BN46 136 aaPredicted RBP1.6□□□□□ -2.15
KPNB1-208ENST00000580019 LYPD5Q6UWN5 251 aa1.6□□□□□ -2.15
KPNB1-208ENST00000580019 VAMP8Q9BV40 100 aa1.6□□□□□ -2.15
KPNB1-208ENST00000580019 CRCT1Q9UGL9 99 aa1.6□□□□□ -2.15
KPNB1-208ENST00000580019 C22orf24Q9Y442 160 aa1.6□□□□□ -2.15
KPNB1-208ENST00000580019 PKHD1P08F94 4074 aa1.6□□□□□ -2.15
KPNB1-208ENST00000580019 DMBT1Q9UGM3 2413 aaPredicted RBP1.59□□□□□ -2.15
KPNB1-208ENST00000580019 FAT2Q9NYQ8 4349 aa1.59□□□□□ -2.15
KPNB1-208ENST00000580019 KMT2AQ03164 3969 aa1.59□□□□□ -2.15
KPNB1-208ENST00000580019 IGKV1D-17A0A075B6S4 117 aa1.59□□□□□ -2.15
KPNB1-208ENST00000580019 CXorf51AA0A1B0GTR3 108 aa1.59□□□□□ -2.15
KPNB1-208ENST00000580019 IGKCP01834 107 aa1.59□□□□□ -2.15
KPNB1-208ENST00000580019 PRB4P10163 310 aaPredicted RBP1.59□□□□□ -2.15
KPNB1-208ENST00000580019 UBE2G1P62253 170 aa1.59□□□□□ -2.15
KPNB1-208ENST00000580019 RBM3P98179 157 aaKnown RBP1.59□□□□□ -2.15
KPNB1-208ENST00000580019 ZNF720Q7Z2F6 126 aa1.59□□□□□ -2.15
KPNB1-208ENST00000580019 COMMD6Q7Z4G1 85 aa1.59□□□□□ -2.15
KPNB1-208ENST00000580019 C4orf33Q8N1A6 199 aa1.59□□□□□ -2.15
KPNB1-208ENST00000580019 DMAC1Q96GE9 116 aa1.59□□□□□ -2.15
KPNB1-208ENST00000580019 ATG5Q9H1Y0 275 aa1.59□□□□□ -2.15
KPNB1-208ENST00000580019 DPH3P1Q9H4G8 78 aa1.59□□□□□ -2.15
KPNB1-208ENST00000580019 FAIMQ9NVQ4 179 aa1.59□□□□□ -2.15
KPNB1-208ENST00000580019 VPS13DQ5THJ4 4388 aa1.59□□□□□ -2.16
KPNB1-208ENST00000580019 IGLV3-32A0A0A0MS00 114 aa1.58□□□□□ -2.16
KPNB1-208ENST00000580019 A0A0J9YY99 117 aa1.58□□□□□ -2.16
KPNB1-208ENST00000580019 RBAKDNA6NC62 111 aa1.58□□□□□ -2.16
KPNB1-208ENST00000580019 JMJD7-PLA2G4BH0Y9G9 81 aa1.58□□□□□ -2.16
KPNB1-208ENST00000580019 NUPR1O60356 82 aa1.58□□□□□ -2.16
KPNB1-208ENST00000580019 PPYP01298 95 aa1.58□□□□□ -2.16
KPNB1-208ENST00000580019 RNASE3P12724 160 aaKnown RBP1.58□□□□□ -2.16
KPNB1-208ENST00000580019 DEFB110Q30KQ9 67 aa1.58□□□□□ -2.16
KPNB1-208ENST00000580019 DEFB121Q5J5C9 76 aa1.58□□□□□ -2.16
KPNB1-208ENST00000580019 COA5Q86WW8 74 aa1.58□□□□□ -2.16
KPNB1-208ENST00000580019 KRTAP4-1Q9BYQ7 146 aa1.58□□□□□ -2.16
KPNB1-208ENST00000580019 CDC42SE1Q9NRR8 79 aa1.58□□□□□ -2.16
KPNB1-208ENST00000580019 PKD1P98161 4303 aa1.58□□□□□ -2.16
KPNB1-208ENST00000580019 HSPG2P98160 4391 aa1.58□□□□□ -2.16
KPNB1-208ENST00000580019 DNAH6Q9C0G6 4158 aa1.58□□□□□ -2.16
KPNB1-208ENST00000580019 MYCBP2O75592 4640 aa1.57□□□□□ -2.16
KPNB1-208ENST00000580019 TRAV13-2A0A0B4J235 113 aa1.57□□□□□ -2.16
KPNB1-208ENST00000580019 TRBV6-5A0A0K0K1A5 114 aa1.57□□□□□ -2.16
KPNB1-208ENST00000580019 NUPR2A6NF83 97 aa1.57□□□□□ -2.16
KPNB1-208ENST00000580019 K7EIL1 84 aa1.57□□□□□ -2.16
KPNB1-208ENST00000580019 SNCAP37840 140 aa1.57□□□□□ -2.16
KPNB1-208ENST00000580019 KRTDAPP60985 99 aa1.57□□□□□ -2.16
KPNB1-208ENST00000580019 MPV17LQ2QL34 196 aa1.57□□□□□ -2.16
KPNB1-208ENST00000580019 CSAG1Q6PB30 78 aa1.57□□□□□ -2.16
KPNB1-208ENST00000580019 SPTSSBQ8NFR3 76 aa1.57□□□□□ -2.16
KPNB1-208ENST00000580019 MYOZ3Q8TDC0 251 aa1.57□□□□□ -2.16
KPNB1-208ENST00000580019 MRPL35Q9NZE8 188 aaKnown RBP1.57□□□□□ -2.16
KPNB1-208ENST00000580019 MRPL36Q9P0J6 103 aaKnown RBP1.57□□□□□ -2.16
KPNB1-208ENST00000580019 APOBP04114 4563 aaKnown RBP1.57□□□□□ -2.16
KPNB1-208ENST00000580019 TRAV12-3A0A0B4J271 114 aa1.56□□□□□ -2.16
KPNB1-208ENST00000580019 SNRNP200O75643 2136 aaKnown RBP1.56□□□□□ -2.16
KPNB1-208ENST00000580019 IGHV3-30P01768 117 aa1.56□□□□□ -2.16
KPNB1-208ENST00000580019 MT-ATP8P03928 68 aa1.56□□□□□ -2.16
KPNB1-208ENST00000580019 IGHV3-30-5P0DP03 117 aa1.56□□□□□ -2.16
KPNB1-208ENST00000580019 CCL8P80075 99 aa1.56□□□□□ -2.16
KPNB1-208ENST00000580019 Q0VG73 95 aa1.56□□□□□ -2.16
KPNB1-208ENST00000580019 COX14Q96I36 57 aa1.56□□□□□ -2.16
KPNB1-208ENST00000580019 CYP4F30PQ9H0H9 118 aa1.56□□□□□ -2.16
KPNB1-208ENST00000580019 TMEM14CQ9P0S9 112 aa1.56□□□□□ -2.16
KPNB1-208ENST00000580019 LINC00312Q9Y6C7 94 aa1.56□□□□□ -2.16
KPNB1-208ENST00000580019 EXPH5Q8NEV8 1989 aa1.56□□□□□ -2.16
KPNB1-208ENST00000580019 TRAV23DV6A0A075B6W5 121 aa1.55□□□□□ -2.16
KPNB1-208ENST00000580019 SPRR5A0A1B0GTR4 108 aa1.55□□□□□ -2.16
KPNB1-208ENST00000580019 NAP1L6A6NFF2 107 aa1.55□□□□□ -2.16
KPNB1-208ENST00000580019 GNGT2O14610 69 aa1.55□□□□□ -2.16
KPNB1-208ENST00000580019 PDE6GP18545 87 aa1.55□□□□□ -2.16
KPNB1-208ENST00000580019 SPRNQ5BIV9 151 aa1.55□□□□□ -2.16
KPNB1-208ENST00000580019 CYP2G1PQ6ZSU1 146 aa1.55□□□□□ -2.16
KPNB1-208ENST00000580019 C15orf53Q8NAA6 179 aa1.55□□□□□ -2.16
KPNB1-208ENST00000580019 C10orf82Q8WW14 230 aa1.55□□□□□ -2.16
KPNB1-208ENST00000580019 ODF3Q96PU9 254 aa1.55□□□□□ -2.16
KPNB1-208ENST00000580019 LIMD2Q9BT23 127 aa1.55□□□□□ -2.16
KPNB1-208ENST00000580019 LRP1BQ9NZR2 4599 aa1.54□□□□□ -2.16
KPNB1-208ENST00000580019 DNAH5Q8TE73 4624 aa1.54□□□□□ -2.16
KPNB1-208ENST00000580019 HCG22E2RYF7 251 aa1.54□□□□□ -2.16
KPNB1-208ENST00000580019 DNAL4O96015 105 aa1.54□□□□□ -2.16
KPNB1-208ENST00000580019 TFF1P04155 84 aa1.54□□□□□ -2.16
KPNB1-208ENST00000580019 CCKP06307 115 aa1.54□□□□□ -2.16
KPNB1-208ENST00000580019 IGKV4-1P06312 121 aa1.54□□□□□ -2.16
KPNB1-208ENST00000580019 ASIPP42127 132 aa1.54□□□□□ -2.16
KPNB1-208ENST00000580019 LINC00322Q6ZN03 302 aaPredicted RBP1.54□□□□□ -2.16
KPNB1-208ENST00000580019 ZNF818PQ6ZRF7 136 aa1.54□□□□□ -2.16
KPNB1-208ENST00000580019 LCN9Q8WX39 176 aa1.54□□□□□ -2.16
KPNB1-208ENST00000580019 IFI27L1Q96BM0 104 aa1.54□□□□□ -2.16
KPNB1-208ENST00000580019 PMCHL2Q9BQD1 86 aa1.54□□□□□ -2.16
KPNB1-208ENST00000580019 BPESC1Q9GZL8 116 aa1.54□□□□□ -2.16
KPNB1-208ENST00000580019 MED9Q9NWA0 146 aa1.54□□□□□ -2.16
KPNB1-208ENST00000580019 SNURFQ9Y675 71 aa1.54□□□□□ -2.16
KPNB1-208ENST00000580019 FLG2Q5D862 2391 aaPredicted RBP1.54□□□□□ -2.16
KPNB1-208ENST00000580019 MUC2Q02817 5179 aa1.53□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 73.6 ms