RNA–Protein interactions for RNA: ENST00000577541.1

TOP2A-202, Transcript of DNA topoisomerase II alpha, humanhuman

TSL 2

Gene TOP2A, Length 420 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2A-202ENST00000577541 FAT1Q14517 4588 aa-0.43□□□□□ -2.48
TOP2A-202ENST00000577541 A0A0G2JMZ2 1700 aa-0.43□□□□□ -2.48
TOP2A-202ENST00000577541 AKAP13Q12802 2813 aa-0.43□□□□□ -2.48
TOP2A-202ENST00000577541 PEG3Q9GZU2 1588 aa-0.43□□□□□ -2.48
TOP2A-202ENST00000577541 C20orf202A1L168 122 aa-0.43□□□□□ -2.48
TOP2A-202ENST00000577541 CPSF4LA6NMK7 179 aaKnown RBP-0.43□□□□□ -2.48
TOP2A-202ENST00000577541 SYS1-DBNDD2H3BUS1 97 aa-0.43□□□□□ -2.48
TOP2A-202ENST00000577541 CGREF1Q99674 301 aa-0.43□□□□□ -2.48
TOP2A-202ENST00000577541 DNAH9Q9NYC9 4486 aa-0.43□□□□□ -2.48
TOP2A-202ENST00000577541 SETD2Q9BYW2 2564 aaPredicted RBP-0.43□□□□□ -2.48
TOP2A-202ENST00000577541 MLH3Q9UHC1 1453 aa-0.43□□□□□ -2.48
TOP2A-202ENST00000577541 NBEAL1Q6ZS30 2694 aa-0.43□□□□□ -2.48
TOP2A-202ENST00000577541 CNOT1A5YKK6 2376 aaKnown RBP-0.43□□□□□ -2.48
TOP2A-202ENST00000577541 S100A10P60903 97 aa-0.44□□□□□ -2.48
TOP2A-202ENST00000577541 PDCD11Q14690 1871 aaKnown RBP-0.45□□□□□ -2.48
TOP2A-202ENST00000577541 TRBV25-1A0A075B6N4 114 aa-0.45□□□□□ -2.48
TOP2A-202ENST00000577541 H0Y9P7 68 aa-0.45□□□□□ -2.48
TOP2A-202ENST00000577541 MRPS10P82664 201 aaKnown RBP-0.45□□□□□ -2.48
TOP2A-202ENST00000577541 PSMG4Q5JS54 123 aa-0.45□□□□□ -2.48
TOP2A-202ENST00000577541 PMCHL2Q9BQD1 86 aa-0.45□□□□□ -2.48
TOP2A-202ENST00000577541 HERC2O95714 4834 aa-0.45□□□□□ -2.48
TOP2A-202ENST00000577541 PRRC2CQ9Y520 2896 aaKnown RBP-0.45□□□□□ -2.48
TOP2A-202ENST00000577541 TRANK1O15050 2925 aa-0.45□□□□□ -2.48
TOP2A-202ENST00000577541 PCNX1Q96RV3 2341 aa-0.46□□□□□ -2.48
TOP2A-202ENST00000577541 EDC4Q6P2E9 1401 aaKnown RBP-0.46□□□□□ -2.48
TOP2A-202ENST00000577541 TRGV9Q99603 122 aa-0.46□□□□□ -2.48
TOP2A-202ENST00000577541 PSENENQ9NZ42 101 aa-0.46□□□□□ -2.48
TOP2A-202ENST00000577541 VPS13DQ5THJ4 4388 aa-0.46□□□□□ -2.48
TOP2A-202ENST00000577541 CNTLNQ9NXG0 1405 aa-0.47□□□□□ -2.48
TOP2A-202ENST00000577541 TNRC18O15417 2968 aaPredicted RBP-0.47□□□□□ -2.48
TOP2A-202ENST00000577541 LAMA5O15230 3695 aa-0.47□□□□□ -2.48
TOP2A-202ENST00000577541 TMEM218A2RU14 115 aa-0.47□□□□□ -2.48
TOP2A-202ENST00000577541 SPINK4O60575 86 aa-0.47□□□□□ -2.48
TOP2A-202ENST00000577541 COX8AP10176 69 aa-0.47□□□□□ -2.48
TOP2A-202ENST00000577541 S100PP25815 95 aa-0.47□□□□□ -2.48
TOP2A-202ENST00000577541 KRTDAPP60985 99 aa-0.47□□□□□ -2.48
TOP2A-202ENST00000577541 DEFB112Q30KQ8 113 aa-0.47□□□□□ -2.48
TOP2A-202ENST00000577541 NCMAPQ5T1S8 102 aa-0.47□□□□□ -2.48
TOP2A-202ENST00000577541 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP-0.47□□□□□ -2.48
TOP2A-202ENST00000577541 SHPRHQ149N8 1683 aa-0.47□□□□□ -2.48
TOP2A-202ENST00000577541 APOBP04114 4563 aaKnown RBP-0.48□□□□□ -2.49
TOP2A-202ENST00000577541 TRAV30A0A087WSZ9 112 aa-0.48□□□□□ -2.49
TOP2A-202ENST00000577541 H3BQF6 201 aa-0.48□□□□□ -2.49
TOP2A-202ENST00000577541 ARMS2P0C7Q2 107 aa-0.48□□□□□ -2.49
TOP2A-202ENST00000577541 GNGT1P63211 74 aa-0.48□□□□□ -2.49
TOP2A-202ENST00000577541 USMG5Q96IX5 58 aa-0.48□□□□□ -2.49
TOP2A-202ENST00000577541 MON2Q7Z3U7 1717 aa-0.48□□□□□ -2.49
TOP2A-202ENST00000577541 HTTP42858 3142 aa-0.49□□□□□ -2.49
TOP2A-202ENST00000577541 SAMD9Q5K651 1589 aa-0.49□□□□□ -2.49
TOP2A-202ENST00000577541 RBP2P50120 134 aa-0.49□□□□□ -2.49
TOP2A-202ENST00000577541 PMCHL1Q16048 86 aa-0.49□□□□□ -2.49
TOP2A-202ENST00000577541 DEFB135Q30KP9 77 aa-0.49□□□□□ -2.49
TOP2A-202ENST00000577541 SERP2Q8N6R1 65 aa-0.49□□□□□ -2.49
TOP2A-202ENST00000577541 MRPL34Q9BQ48 92 aaKnown RBP-0.49□□□□□ -2.49
TOP2A-202ENST00000577541 ABCC10Q5T3U5 1492 aa-0.49□□□□□ -2.49
TOP2A-202ENST00000577541 C5P01031 1676 aa-0.49□□□□□ -2.49
TOP2A-202ENST00000577541 F8WEM9 126 aa-0.5□□□□□ -2.49
TOP2A-202ENST00000577541 UQCRHP07919 91 aa-0.5□□□□□ -2.49
TOP2A-202ENST00000577541 HIGD1BQ9P298 99 aa-0.5□□□□□ -2.49
TOP2A-202ENST00000577541 RAPGEF2Q9Y4G8 1499 aa-0.5□□□□□ -2.49
TOP2A-202ENST00000577541 KIAA1551Q9HCM1 1747 aa-0.5□□□□□ -2.49
TOP2A-202ENST00000577541 ANKRD36A6QL64 1941 aa-0.5□□□□□ -2.49
TOP2A-202ENST00000577541 KNL1Q8NG31 2342 aa-0.5□□□□□ -2.49
TOP2A-202ENST00000577541 LRRC37AA6NMS7 1700 aa-0.51□□□□□ -2.49
TOP2A-202ENST00000577541 NDUFC1O43677 76 aa-0.51□□□□□ -2.49
TOP2A-202ENST00000577541 IGLC2P0DOY2 106 aa-0.51□□□□□ -2.49
TOP2A-202ENST00000577541 IGLC3P0DOY3 106 aa-0.51□□□□□ -2.49
TOP2A-202ENST00000577541 VAMP8Q9BV40 100 aa-0.51□□□□□ -2.49
TOP2A-202ENST00000577541 LYSTQ99698 3801 aa-0.51□□□□□ -2.49
TOP2A-202ENST00000577541 TEX14Q8IWB6 1497 aa-0.52□□□□□ -2.49
TOP2A-202ENST00000577541 FYCO1Q9BQS8 1478 aa-0.52□□□□□ -2.49
TOP2A-202ENST00000577541 EPG5Q9HCE0 2579 aa-0.52□□□□□ -2.49
TOP2A-202ENST00000577541 I3L3M4 83 aa-0.52□□□□□ -2.49
TOP2A-202ENST00000577541 ATOX1O00244 68 aa-0.52□□□□□ -2.49
TOP2A-202ENST00000577541 SPRR2AP35326 72 aa-0.52□□□□□ -2.49
TOP2A-202ENST00000577541 FAUP35544 74 aaKnown RBP-0.52□□□□□ -2.49
TOP2A-202ENST00000577541 MXRA5Q9NR99 2828 aa-0.52□□□□□ -2.49
TOP2A-202ENST00000577541 USP9YO00507 2555 aaPredicted RBP-0.52□□□□□ -2.49
TOP2A-202ENST00000577541 RIF1Q5UIP0 2472 aaKnown RBP-0.53□□□□□ -2.49
TOP2A-202ENST00000577541 LAMA2P24043 3122 aaKnown RBP-0.53□□□□□ -2.49
TOP2A-202ENST00000577541 NBPF19A0A087WUL8 3843 aa-0.53□□□□□ -2.49
TOP2A-202ENST00000577541 PKHD1L1Q86WI1 4243 aa-0.53□□□□□ -2.49
TOP2A-202ENST00000577541 AKAP9Q99996 3911 aa-0.53□□□□□ -2.49
TOP2A-202ENST00000577541 TRBV7-7A0A0K0K1E9 115 aa-0.53□□□□□ -2.49
TOP2A-202ENST00000577541 SPRR2EP22531 72 aa-0.53□□□□□ -2.49
TOP2A-202ENST00000577541 COL5A1-AS1Q5SY13 56 aa-0.53□□□□□ -2.49
TOP2A-202ENST00000577541 TCEAL7Q9BRU2 100 aa-0.53□□□□□ -2.49
TOP2A-202ENST00000577541 SNHG12Q9BXW3 62 aa-0.53□□□□□ -2.49
TOP2A-202ENST00000577541 AP4S1Q9Y587 144 aa-0.53□□□□□ -2.49
TOP2A-202ENST00000577541 DNHD1Q96M86 4753 aa-0.53□□□□□ -2.49
TOP2A-202ENST00000577541 ADAMTS12P58397 1594 aa-0.53□□□□□ -2.49
TOP2A-202ENST00000577541 MUC17Q685J3 4493 aa-0.54□□□□□ -2.5
TOP2A-202ENST00000577541 NBEAL2Q6ZNJ1 2754 aa-0.54□□□□□ -2.5
TOP2A-202ENST00000577541 RGPD1P0DJD0 1748 aa-0.54□□□□□ -2.5
TOP2A-202ENST00000577541 UBR1Q8IWV7 1749 aa-0.54□□□□□ -2.5
TOP2A-202ENST00000577541 ANKRD26Q9UPS8 1709 aa-0.54□□□□□ -2.5
TOP2A-202ENST00000577541 ZZEF1O43149 2961 aa-0.54□□□□□ -2.5
TOP2A-202ENST00000577541 ETDBQ3ZM63 59 aa-0.54□□□□□ -2.5
TOP2A-202ENST00000577541 WFDC13Q8IUB5 93 aa-0.54□□□□□ -2.5
TOP2A-202ENST00000577541 C20orf78Q9BR46 151 aa-0.54□□□□□ -2.5
Retrieved 100 of 20,778 RNA–protein pairs in 81.3 ms