RNA–Protein interactions for RNA: ENST00000570818.5

CDC27-212, Transcript of cell division cycle 27, humanhuman

TSL 5

Gene CDC27, Length 656 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-212ENST00000570818 DPY30Q9C005 99 aa-0.03□□□□□ -2.41
CDC27-212ENST00000570818 CCDC168Q8NDH2 2452 aa-0.03□□□□□ -2.41
CDC27-212ENST00000570818 ACANP16112 2415 aa-0.03□□□□□ -2.41
CDC27-212ENST00000570818 ANKRD11Q6UB99 2663 aaPredicted RBP-0.03□□□□□ -2.41
CDC27-212ENST00000570818 MARF1Q9Y4F3 1742 aaKnown RBP-0.04□□□□□ -2.42
CDC27-212ENST00000570818 SHPRHQ149N8 1683 aa-0.04□□□□□ -2.42
CDC27-212ENST00000570818 TARBP1Q13395 1621 aaKnown RBP-0.04□□□□□ -2.42
CDC27-212ENST00000570818 H7BZZ5 65 aa-0.04□□□□□ -2.42
CDC27-212ENST00000570818 DNAJC13O75165 2243 aa-0.04□□□□□ -2.42
CDC27-212ENST00000570818 LRP2P98164 4655 aa-0.04□□□□□ -2.42
CDC27-212ENST00000570818 ACACBO00763 2458 aa-0.04□□□□□ -2.42
CDC27-212ENST00000570818 ABCC2Q92887 1545 aa-0.04□□□□□ -2.42
CDC27-212ENST00000570818 SPTA1P02549 2419 aa-0.04□□□□□ -2.42
CDC27-212ENST00000570818 STARD9Q9P2P6 4700 aa-0.04□□□□□ -2.42
CDC27-212ENST00000570818 TEX14Q8IWB6 1497 aa-0.04□□□□□ -2.42
CDC27-212ENST00000570818 RAPGEF2Q9Y4G8 1499 aa-0.04□□□□□ -2.42
CDC27-212ENST00000570818 C5P01031 1676 aa-0.05□□□□□ -2.42
CDC27-212ENST00000570818 CLTCQ00610 1675 aaKnown RBP-0.05□□□□□ -2.42
CDC27-212ENST00000570818 CELSR3Q9NYQ7 3312 aa-0.05□□□□□ -2.42
CDC27-212ENST00000570818 UQCRHLA0A096LP55 91 aa-0.05□□□□□ -2.42
CDC27-212ENST00000570818 M0R143 59 aa-0.05□□□□□ -2.42
CDC27-212ENST00000570818 SPRR2DP22532 72 aa-0.05□□□□□ -2.42
CDC27-212ENST00000570818 FAUP35544 74 aaKnown RBP-0.05□□□□□ -2.42
CDC27-212ENST00000570818 KLK9Q2XQG4 91 aa-0.05□□□□□ -2.42
CDC27-212ENST00000570818 NCMAPQ5T1S8 102 aa-0.05□□□□□ -2.42
CDC27-212ENST00000570818 CRIPTQ9P021 101 aa-0.05□□□□□ -2.42
CDC27-212ENST00000570818 COL14A1Q05707 1796 aaKnown RBP-0.05□□□□□ -2.42
CDC27-212ENST00000570818 WDFY4Q6ZS81 3184 aa-0.05□□□□□ -2.42
CDC27-212ENST00000570818 EDC4Q6P2E9 1401 aaKnown RBP-0.05□□□□□ -2.42
CDC27-212ENST00000570818 MYCBP2O75592 4640 aa-0.06□□□□□ -2.42
CDC27-212ENST00000570818 CPSF4LA6NMK7 179 aaKnown RBP-0.06□□□□□ -2.42
CDC27-212ENST00000570818 ARMS2P0C7Q2 107 aa-0.06□□□□□ -2.42
CDC27-212ENST00000570818 ZNF720Q7Z2F6 126 aa-0.06□□□□□ -2.42
CDC27-212ENST00000570818 APLNQ9ULZ1 77 aa-0.06□□□□□ -2.42
CDC27-212ENST00000570818 KIF20BQ96Q89 1820 aa-0.06□□□□□ -2.42
CDC27-212ENST00000570818 HUWE1Q7Z6Z7 4374 aaKnown RBP-0.06□□□□□ -2.42
CDC27-212ENST00000570818 AKAP12Q02952 1782 aa-0.06□□□□□ -2.42
CDC27-212ENST00000570818 LRRC37AA6NMS7 1700 aa-0.07□□□□□ -2.42
CDC27-212ENST00000570818 TENM2Q9NT68 2774 aa-0.07□□□□□ -2.42
CDC27-212ENST00000570818 I3L3M4 83 aa-0.07□□□□□ -2.42
CDC27-212ENST00000570818 ETDBQ3ZM63 59 aa-0.07□□□□□ -2.42
CDC27-212ENST00000570818 TNXBP22105 4242 aa-0.07□□□□□ -2.42
CDC27-212ENST00000570818 MYH4Q9Y623 1939 aa-0.07□□□□□ -2.42
CDC27-212ENST00000570818 TRANK1O15050 2925 aa-0.07□□□□□ -2.42
CDC27-212ENST00000570818 DSPP15924 2871 aaKnown RBP-0.08□□□□□ -2.42
CDC27-212ENST00000570818 ATRQ13535 2644 aa-0.08□□□□□ -2.42
CDC27-212ENST00000570818 KIAA1551Q9HCM1 1747 aa-0.08□□□□□ -2.42
CDC27-212ENST00000570818 DCHS2Q6V1P9 2916 aa-0.08□□□□□ -2.42
CDC27-212ENST00000570818 KMT2AQ03164 3969 aa-0.08□□□□□ -2.42
CDC27-212ENST00000570818 HSPG2P98160 4391 aa-0.08□□□□□ -2.42
CDC27-212ENST00000570818 MAP1BP46821 2468 aaKnown RBP-0.09□□□□□ -2.42
CDC27-212ENST00000570818 ANKRD26Q9UPS8 1709 aa-0.09□□□□□ -2.42
CDC27-212ENST00000570818 D6R8Y8 96 aa-0.09□□□□□ -2.42
CDC27-212ENST00000570818 LEPROTL1O95214 131 aa-0.09□□□□□ -2.42
CDC27-212ENST00000570818 S100A8P05109 93 aa-0.09□□□□□ -2.42
CDC27-212ENST00000570818 HMGN3Q15651 99 aa-0.09□□□□□ -2.42
CDC27-212ENST00000570818 MUSTN1Q8IVN3 82 aa-0.09□□□□□ -2.42
CDC27-212ENST00000570818 WNK1Q9H4A3 2382 aa-0.09□□□□□ -2.42
CDC27-212ENST00000570818 TGP01266 2768 aa-0.09□□□□□ -2.42
CDC27-212ENST00000570818 USP9XQ93008 2570 aaPredicted RBP-0.09□□□□□ -2.42
CDC27-212ENST00000570818 MXRA5Q9NR99 2828 aa-0.09□□□□□ -2.42
CDC27-212ENST00000570818 NRXN1Q9ULB1 1477 aa-0.1□□□□□ -2.42
CDC27-212ENST00000570818 GCN1Q92616 2671 aaKnown RBP-0.1□□□□□ -2.42
CDC27-212ENST00000570818 CRYBG1Q9Y4K1 1723 aa-0.1□□□□□ -2.42
CDC27-212ENST00000570818 ITPR3Q14573 2671 aa-0.1□□□□□ -2.43
CDC27-212ENST00000570818 CUX1P39880 1505 aa-0.1□□□□□ -2.43
CDC27-212ENST00000570818 MGAM2Q2M2H8 2515 aa-0.1□□□□□ -2.43
CDC27-212ENST00000570818 NKTRP30414 1462 aaKnown RBP-0.1□□□□□ -2.43
CDC27-212ENST00000570818 ITPR1Q14643 2758 aa-0.11□□□□□ -2.43
CDC27-212ENST00000570818 LRP1BQ9NZR2 4599 aa-0.11□□□□□ -2.43
CDC27-212ENST00000570818 EPG5Q9HCE0 2579 aa-0.11□□□□□ -2.43
CDC27-212ENST00000570818 TRBV7-7A0A0K0K1E9 115 aa-0.11□□□□□ -2.43
CDC27-212ENST00000570818 SPTY2D1-AS1A0A0U1RR47 76 aa-0.11□□□□□ -2.43
CDC27-212ENST00000570818 F8WEM9 126 aa-0.11□□□□□ -2.43
CDC27-212ENST00000570818 MT4P47944 62 aa-0.11□□□□□ -2.43
CDC27-212ENST00000570818 ALKAL2Q6UX46 152 aa-0.11□□□□□ -2.43
CDC27-212ENST00000570818 PKD1L3Q7Z443 1732 aa-0.11□□□□□ -2.43
CDC27-212ENST00000570818 TNRC18O15417 2968 aaPredicted RBP-0.11□□□□□ -2.43
CDC27-212ENST00000570818 ABCC10Q5T3U5 1492 aa-0.11□□□□□ -2.43
CDC27-212ENST00000570818 USP9YO00507 2555 aaPredicted RBP-0.11□□□□□ -2.43
CDC27-212ENST00000570818 APC2O95996 2303 aa-0.12□□□□□ -2.43
CDC27-212ENST00000570818 VPS8Q8N3P4 1428 aa-0.12□□□□□ -2.43
CDC27-212ENST00000570818 AKAP13Q12802 2813 aa-0.12□□□□□ -2.43
CDC27-212ENST00000570818 ZFHX4Q86UP3 3567 aa-0.12□□□□□ -2.43
CDC27-212ENST00000570818 M0R2T5 61 aa-0.12□□□□□ -2.43
CDC27-212ENST00000570818 PKIAP61925 76 aa-0.12□□□□□ -2.43
CDC27-212ENST00000570818 PSENENQ9NZ42 101 aa-0.12□□□□□ -2.43
CDC27-212ENST00000570818 UNC80Q8N2C7 3258 aa-0.12□□□□□ -2.43
CDC27-212ENST00000570818 IQSEC2Q5JU85 1478 aa-0.12□□□□□ -2.43
CDC27-212ENST00000570818 CSMD1Q96PZ7 3565 aa-0.12□□□□□ -2.43
CDC27-212ENST00000570818 SLIT1O75093 1534 aa-0.13□□□□□ -2.43
CDC27-212ENST00000570818 EPRSP07814 1512 aaKnown RBP-0.13□□□□□ -2.43
CDC27-212ENST00000570818 SAMD9Q5K651 1589 aa-0.13□□□□□ -2.43
CDC27-212ENST00000570818 LPAP08519 4548 aa-0.13□□□□□ -2.43
CDC27-212ENST00000570818 KRTAP6-1Q3LI64 71 aa-0.13□□□□□ -2.43
CDC27-212ENST00000570818 KRTAP19-6Q3LI70 58 aa-0.13□□□□□ -2.43
CDC27-212ENST00000570818 H1FX-AS1Q4G0G2 97 aa-0.13□□□□□ -2.43
CDC27-212ENST00000570818 LAMA2P24043 3122 aaKnown RBP-0.13□□□□□ -2.43
CDC27-212ENST00000570818 EP400Q96L91 3159 aa-0.13□□□□□ -2.43
CDC27-212ENST00000570818 RGPD2P0DJD1 1756 aa-0.14□□□□□ -2.43
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms