RNA–Protein interactions for RNA: ENST00000569924.1

CNOT1-221, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 2

Gene CNOT1, Length 493 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-221ENST00000569924 MEF2BQ02080 365 aaPredicted RBP1.82□□□□□ -2.12
CNOT1-221ENST00000569924 MIAQ16674 131 aa1.82□□□□□ -2.12
CNOT1-221ENST00000569924 ENHOQ6UWT2 76 aa1.82□□□□□ -2.12
CNOT1-221ENST00000569924 LCA10Q71F78 164 aa1.82□□□□□ -2.12
CNOT1-221ENST00000569924 KTN1-AS1Q86SY8 53 aa1.82□□□□□ -2.12
CNOT1-221ENST00000569924 NUP35Q8NFH5 326 aa1.82□□□□□ -2.12
CNOT1-221ENST00000569924 PPP1R1CQ8WVI7 109 aa1.82□□□□□ -2.12
CNOT1-221ENST00000569924 ZC2HC1AQ96GY0 325 aa1.82□□□□□ -2.12
CNOT1-221ENST00000569924 TMEM167BQ9NRX6 74 aa1.82□□□□□ -2.12
CNOT1-221ENST00000569924 SPANXA1Q9NS26 97 aa1.82□□□□□ -2.12
CNOT1-221ENST00000569924 EPDR1Q9UM22 224 aa1.82□□□□□ -2.12
CNOT1-221ENST00000569924 AHNAK2Q8IVF2 5795 aa1.81□□□□□ -2.12
CNOT1-221ENST00000569924 TRBV7-3A0A075B6L6 115 aa1.81□□□□□ -2.12
CNOT1-221ENST00000569924 IGKV2-28A0A075B6P5 120 aa1.81□□□□□ -2.12
CNOT1-221ENST00000569924 IGHV3-64A0A075B6Q5 118 aa1.81□□□□□ -2.12
CNOT1-221ENST00000569924 TRBV6-1A0A0K0K1D8 114 aa1.81□□□□□ -2.12
CNOT1-221ENST00000569924 TMEM262E9PQX1 116 aa1.81□□□□□ -2.12
CNOT1-221ENST00000569924 H3BPC8 53 aa1.81□□□□□ -2.12
CNOT1-221ENST00000569924 H3BVH4 76 aa1.81□□□□□ -2.12
CNOT1-221ENST00000569924 ARPC5O15511 151 aa1.81□□□□□ -2.12
CNOT1-221ENST00000569924 IGKV2D-28P01615 120 aa1.81□□□□□ -2.12
CNOT1-221ENST00000569924 PPBPP02775 128 aa1.81□□□□□ -2.12
CNOT1-221ENST00000569924 ANGP03950 147 aaKnown RBP1.81□□□□□ -2.12
CNOT1-221ENST00000569924 ARMS2P0C7Q2 107 aa1.81□□□□□ -2.12
CNOT1-221ENST00000569924 GZMBP10144 247 aa1.81□□□□□ -2.12
CNOT1-221ENST00000569924 TPT1P13693 172 aaKnown RBP1.81□□□□□ -2.12
CNOT1-221ENST00000569924 KRTAP10-12P60413 245 aa1.81□□□□□ -2.12
CNOT1-221ENST00000569924 SERF2P84101 59 aa1.81□□□□□ -2.12
CNOT1-221ENST00000569924 KRTAP25-1Q3LHN0 102 aa1.81□□□□□ -2.12
CNOT1-221ENST00000569924 FAM74A4Q5TZK3 123 aa1.81□□□□□ -2.12
CNOT1-221ENST00000569924 AMMECR1LQ6DCA0 310 aa1.81□□□□□ -2.12
CNOT1-221ENST00000569924 KRTAP26-1Q6PEX3 210 aa1.81□□□□□ -2.12
CNOT1-221ENST00000569924 LINC00299Q6ZSB3 139 aa1.81□□□□□ -2.12
CNOT1-221ENST00000569924 Q86TA4 180 aa1.81□□□□□ -2.12
CNOT1-221ENST00000569924 KRTAP11-1Q8IUC1 163 aa1.81□□□□□ -2.12
CNOT1-221ENST00000569924 SPACA4Q8TDM5 124 aa1.81□□□□□ -2.12
CNOT1-221ENST00000569924 LINC01600Q96MT4 127 aa1.81□□□□□ -2.12
CNOT1-221ENST00000569924 PSMG3Q9BT73 122 aaPredicted RBP1.81□□□□□ -2.12
CNOT1-221ENST00000569924 SMIM3Q9BZL3 60 aa1.81□□□□□ -2.12
CNOT1-221ENST00000569924 PLAC8Q9NZF1 115 aa1.81□□□□□ -2.12
CNOT1-221ENST00000569924 TNFSF18Q9UNG2 199 aa1.81□□□□□ -2.12
CNOT1-221ENST00000569924 ZFP30Q9Y2G7 519 aa1.81□□□□□ -2.12
CNOT1-221ENST00000569924 ARL2-SNX15V9GYD0 113 aa1.81□□□□□ -2.12
CNOT1-221ENST00000569924 TRAV16A0A0A6YYK6 109 aaPredicted RBP1.8□□□□□ -2.12
CNOT1-221ENST00000569924 CXCL1P09341 107 aa1.8□□□□□ -2.12
CNOT1-221ENST00000569924 CRIP1P50238 77 aa1.8□□□□□ -2.12
CNOT1-221ENST00000569924 KRTAP10-8P60410 259 aa1.8□□□□□ -2.12
CNOT1-221ENST00000569924 MOBPQ13875 183 aa1.8□□□□□ -2.12
CNOT1-221ENST00000569924 LINC00269Q8N2A0 174 aa1.8□□□□□ -2.12
CNOT1-221ENST00000569924 MBD3L1Q8WWY6 194 aa1.8□□□□□ -2.12
CNOT1-221ENST00000569924 S100ZQ8WXG8 99 aa1.8□□□□□ -2.12
CNOT1-221ENST00000569924 TCEAL7Q9BRU2 100 aa1.8□□□□□ -2.12
CNOT1-221ENST00000569924 DPH3P1Q9H4G8 78 aa1.8□□□□□ -2.12
CNOT1-221ENST00000569924 R4GN34 69 aa1.8□□□□□ -2.12
CNOT1-221ENST00000569924 TRBV25-1A0A075B6N4 114 aa1.79□□□□□ -2.12
CNOT1-221ENST00000569924 CTXND1A0A1B0GTU2 59 aa1.79□□□□□ -2.12
CNOT1-221ENST00000569924 ZNF56Q15929 161 aa1.79□□□□□ -2.12
CNOT1-221ENST00000569924 IQCJQ1A5X6 159 aa1.79□□□□□ -2.12
CNOT1-221ENST00000569924 LINC01554Q52M75 96 aa1.79□□□□□ -2.12
CNOT1-221ENST00000569924 KRTAP5-11Q6L8G4 156 aa1.79□□□□□ -2.12
CNOT1-221ENST00000569924 SPINK6Q6UWN8 80 aa1.79□□□□□ -2.12
CNOT1-221ENST00000569924 C1orf64Q8NEQ6 169 aa1.79□□□□□ -2.12
CNOT1-221ENST00000569924 OR10AG1Q8NH19 301 aa1.79□□□□□ -2.12
CNOT1-221ENST00000569924 DPH3Q96FX2 82 aa1.79□□□□□ -2.12
CNOT1-221ENST00000569924 AQP10Q96PS8 301 aa1.79□□□□□ -2.12
CNOT1-221ENST00000569924 ZNF471Q9BX82 626 aaPredicted RBP1.79□□□□□ -2.12
CNOT1-221ENST00000569924 LAMTOR3Q9UHA4 124 aa1.79□□□□□ -2.12
CNOT1-221ENST00000569924 IGLV10-54A0A075B6I4 117 aa1.78□□□□□ -2.12
CNOT1-221ENST00000569924 TMSB15BA0A087X1C1 80 aa1.78□□□□□ -2.12
CNOT1-221ENST00000569924 BORCS7-ASMTA0A0B4J1R7 106 aa1.78□□□□□ -2.12
CNOT1-221ENST00000569924 IGHV1-24A0A0C4DH33 117 aa1.78□□□□□ -2.12
CNOT1-221ENST00000569924 C1orf196B1AJZ1 125 aa1.78□□□□□ -2.12
CNOT1-221ENST00000569924 TAX1BP3O14907 124 aa1.78□□□□□ -2.12
CNOT1-221ENST00000569924 RPL28P46779 137 aaKnown RBP1.78□□□□□ -2.12
CNOT1-221ENST00000569924 UBE2G1P62253 170 aa1.78□□□□□ -2.12
CNOT1-221ENST00000569924 COX6A2Q02221 97 aa1.78□□□□□ -2.12
CNOT1-221ENST00000569924 SPANXN1Q5VSR9 72 aa1.78□□□□□ -2.12
CNOT1-221ENST00000569924 CLPSL2Q6UWE3 100 aa1.78□□□□□ -2.12
CNOT1-221ENST00000569924 SCGB3A1Q96QR1 104 aa1.78□□□□□ -2.12
CNOT1-221ENST00000569924 HIGD2AQ9BW72 106 aa1.78□□□□□ -2.12
CNOT1-221ENST00000569924 GVQW2A0A096LPI5 108 aaPredicted RBP1.77□□□□□ -2.13
CNOT1-221ENST00000569924 C11orf86A6NJI1 115 aa1.77□□□□□ -2.13
CNOT1-221ENST00000569924 H3BT86 120 aa1.77□□□□□ -2.13
CNOT1-221ENST00000569924 M0QY20 66 aa1.77□□□□□ -2.13
CNOT1-221ENST00000569924 TRGC2P03986 189 aa1.77□□□□□ -2.13
CNOT1-221ENST00000569924 HRES1P13985 223 aa1.77□□□□□ -2.13
CNOT1-221ENST00000569924 AKR1C3P42330 323 aa1.77□□□□□ -2.13
CNOT1-221ENST00000569924 LCE3CQ5T5A8 94 aa1.77□□□□□ -2.13
CNOT1-221ENST00000569924 RPL7L1Q6DKI1 246 aaKnown RBP1.77□□□□□ -2.13
CNOT1-221ENST00000569924 HIST3H2BBQ8N257 126 aa1.77□□□□□ -2.13
CNOT1-221ENST00000569924 AP1S3Q96PC3 154 aa1.77□□□□□ -2.13
CNOT1-221ENST00000569924 IMMP2LQ96T52 175 aa1.77□□□□□ -2.13
CNOT1-221ENST00000569924 SPANXCQ9NY87 97 aa1.77□□□□□ -2.13
CNOT1-221ENST00000569924 LINC00474Q9P2X8 69 aa1.77□□□□□ -2.13
CNOT1-221ENST00000569924 NAT8Q9UHE5 227 aa1.77□□□□□ -2.13
CNOT1-221ENST00000569924 LPAP08519 4548 aa1.76□□□□□ -2.13
CNOT1-221ENST00000569924 TRAV7A0A075B6U4 112 aa1.76□□□□□ -2.13
CNOT1-221ENST00000569924 A0A096LNI7 61 aa1.76□□□□□ -2.13
CNOT1-221ENST00000569924 IGKV2-24A0A0C4DH68 120 aa1.76□□□□□ -2.13
CNOT1-221ENST00000569924 MUC21A0A0G2JKD1 596 aa1.76□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 72.6 ms