RNA–Protein interactions for RNA: ENST00000568129.1

HDGFL3-205, Transcript of HDGF like 3, humanhuman

TSL 2

Gene HDGFL3, Length 426 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-205ENST00000568129 Q8NDZ9 215 aa4.91□□□□□ -1.62
HDGFL3-205ENST00000568129 HIST1H2BHQ93079 126 aa4.91□□□□□ -1.62
HDGFL3-205ENST00000568129 HIST1H2BNQ99877 126 aa4.91□□□□□ -1.62
HDGFL3-205ENST00000568129 HIST1H2BMQ99879 126 aa4.91□□□□□ -1.62
HDGFL3-205ENST00000568129 PLNP26678 52 aa4.9□□□□□ -1.63
HDGFL3-205ENST00000568129 RPL24P83731 157 aaKnown RBP4.9□□□□□ -1.63
HDGFL3-205ENST00000568129 COA6Q5JTJ3 125 aaKnown RBP4.9□□□□□ -1.63
HDGFL3-205ENST00000568129 RPL37AP8A6NKH3 93 aa4.89□□□□□ -1.63
HDGFL3-205ENST00000568129 LINC00587B1AMM8 73 aa4.89□□□□□ -1.63
HDGFL3-205ENST00000568129 LEPROTO15243 131 aa4.89□□□□□ -1.63
HDGFL3-205ENST00000568129 SCO1O75880 301 aa4.89□□□□□ -1.63
HDGFL3-205ENST00000568129 MYMXA0A1B0GTQ4 84 aa4.88□□□□□ -1.63
HDGFL3-205ENST00000568129 DPM2O94777 84 aa4.88□□□□□ -1.63
HDGFL3-205ENST00000568129 FABP4P15090 132 aa4.88□□□□□ -1.63
HDGFL3-205ENST00000568129 RPL28P46779 137 aaKnown RBP4.88□□□□□ -1.63
HDGFL3-205ENST00000568129 TSPEAR-AS2P59090 65 aa4.88□□□□□ -1.63
HDGFL3-205ENST00000568129 PRR26Q8N8Z3 221 aa4.88□□□□□ -1.63
HDGFL3-205ENST00000568129 NKAPP1Q8N9T2 125 aa4.88□□□□□ -1.63
HDGFL3-205ENST00000568129 PLEKHB2Q96CS7 222 aa4.88□□□□□ -1.63
HDGFL3-205ENST00000568129 NDUFA12Q9UI09 145 aa4.88□□□□□ -1.63
HDGFL3-205ENST00000568129 IGKCP01834 107 aa4.87□□□□□ -1.63
HDGFL3-205ENST00000568129 SMIM13P0DJ93 91 aa4.87□□□□□ -1.63
HDGFL3-205ENST00000568129 NMUP48645 174 aa4.87□□□□□ -1.63
HDGFL3-205ENST00000568129 LINC00158P58513 81 aa4.87□□□□□ -1.63
HDGFL3-205ENST00000568129 MAP1LC3CQ9BXW4 147 aa4.87□□□□□ -1.63
HDGFL3-205ENST00000568129 IGKV2D-26A0A0A0MRZ7 120 aa4.86□□□□□ -1.63
HDGFL3-205ENST00000568129 GAGE10A6NGK3 116 aa4.86□□□□□ -1.63
HDGFL3-205ENST00000568129 SYS1-DBNDD2H3BUS1 97 aa4.86□□□□□ -1.63
HDGFL3-205ENST00000568129 J3QQQ9 107 aa4.86□□□□□ -1.63
HDGFL3-205ENST00000568129 M0R378 163 aa4.86□□□□□ -1.63
HDGFL3-205ENST00000568129 SPRR1AP35321 89 aa4.86□□□□□ -1.63
HDGFL3-205ENST00000568129 RPL13AP40429 203 aaKnown RBP4.86□□□□□ -1.63
HDGFL3-205ENST00000568129 LINC01545Q5VT33 79 aa4.86□□□□□ -1.63
HDGFL3-205ENST00000568129 MIR7-3HGQ8N6C7 128 aa4.86□□□□□ -1.63
HDGFL3-205ENST00000568129 TMEM126AQ9H061 195 aa4.86□□□□□ -1.63
HDGFL3-205ENST00000568129 UBR4Q5T4S7 5183 aa4.85□□□□□ -1.63
HDGFL3-205ENST00000568129 IGKV2-28A0A075B6P5 120 aa4.85□□□□□ -1.63
HDGFL3-205ENST00000568129 E9PLD3 99 aa4.85□□□□□ -1.63
HDGFL3-205ENST00000568129 H0Y8G0 127 aa4.85□□□□□ -1.63
HDGFL3-205ENST00000568129 IGKV2D-28P01615 120 aa4.85□□□□□ -1.63
HDGFL3-205ENST00000568129 PET117Q6UWS5 81 aa4.85□□□□□ -1.63
HDGFL3-205ENST00000568129 KCNQ1DNQ9H478 68 aa4.85□□□□□ -1.63
HDGFL3-205ENST00000568129 TRBV10-2A0A0K0K1G8 114 aa4.84□□□□□ -1.63
HDGFL3-205ENST00000568129 KRTAP4-16G5E9R7 235 aaPredicted RBP4.84□□□□□ -1.63
HDGFL3-205ENST00000568129 HERVK_113P61574 105 aa4.84□□□□□ -1.63
HDGFL3-205ENST00000568129 FAM229BQ4G0N7 80 aa4.84□□□□□ -1.63
HDGFL3-205ENST00000568129 PMCHL2Q9BQD1 86 aa4.84□□□□□ -1.63
HDGFL3-205ENST00000568129 A0A087X002 238 aa4.83□□□□□ -1.64
HDGFL3-205ENST00000568129 A0A0U1RRA0 63 aa4.83□□□□□ -1.64
HDGFL3-205ENST00000568129 TMEM238C9JI98 176 aa4.83□□□□□ -1.64
HDGFL3-205ENST00000568129 NDUFC2O95298 119 aa4.83□□□□□ -1.64
HDGFL3-205ENST00000568129 CTAG1AP78358 180 aa4.83□□□□□ -1.64
HDGFL3-205ENST00000568129 LRP2P98164 4655 aa4.83□□□□□ -1.64
HDGFL3-205ENST00000568129 MEIG1Q5JSS6 88 aa4.83□□□□□ -1.64
HDGFL3-205ENST00000568129 LINC00337Q8N6G1 96 aa4.83□□□□□ -1.64
HDGFL3-205ENST00000568129 PRYO14603 147 aa4.82□□□□□ -1.64
HDGFL3-205ENST00000568129 ATP6V1G1O75348 118 aa4.82□□□□□ -1.64
HDGFL3-205ENST00000568129 C3orf79P0CE67 100 aa4.82□□□□□ -1.64
HDGFL3-205ENST00000568129 CRYGAP11844 174 aa4.82□□□□□ -1.64
HDGFL3-205ENST00000568129 UBE2AP49459 152 aa4.82□□□□□ -1.64
HDGFL3-205ENST00000568129 BOD1L2Q8IYS8 172 aa4.82□□□□□ -1.64
HDGFL3-205ENST00000568129 A0A0J9YXY3 114 aa4.81□□□□□ -1.64
HDGFL3-205ENST00000568129 TIMM17BO60830 172 aa4.81□□□□□ -1.64
HDGFL3-205ENST00000568129 LGALS3P17931 250 aaKnown RBP4.81□□□□□ -1.64
HDGFL3-205ENST00000568129 PRLHP81277 87 aa4.81□□□□□ -1.64
HDGFL3-205ENST00000568129 KRTAP13-2Q52LG2 175 aa4.81□□□□□ -1.64
HDGFL3-205ENST00000568129 ADAMTSL4-AS1Q5T5F5 129 aa4.81□□□□□ -1.64
HDGFL3-205ENST00000568129 FAM19A1Q7Z5A9 133 aa4.81□□□□□ -1.64
HDGFL3-205ENST00000568129 LITAFQ99732 161 aa4.81□□□□□ -1.64
HDGFL3-205ENST00000568129 IGLV6-57P01721 117 aa4.8□□□□□ -1.64
HDGFL3-205ENST00000568129 S100A1P23297 94 aa4.8□□□□□ -1.64
HDGFL3-205ENST00000568129 SOSTDC1Q6X4U4 206 aa4.8□□□□□ -1.64
HDGFL3-205ENST00000568129 LPAP08519 4548 aa4.79□□□□□ -1.64
HDGFL3-205ENST00000568129 TRBV10-3A0A0K0K1G6 114 aa4.79□□□□□ -1.64
HDGFL3-205ENST00000568129 EIF4EBP3O60516 100 aaPredicted RBP4.79□□□□□ -1.64
HDGFL3-205ENST00000568129 DAND5Q8N907 189 aa4.79□□□□□ -1.64
HDGFL3-205ENST00000568129 PPDPFQ9H3Y8 114 aa4.79□□□□□ -1.64
HDGFL3-205ENST00000568129 SPANXB1Q9NS25 103 aaPredicted RBP4.79□□□□□ -1.64
HDGFL3-205ENST00000568129 NCR3O14931 201 aa4.78□□□□□ -1.64
HDGFL3-205ENST00000568129 AKR1D1P51857 326 aa4.78□□□□□ -1.64
HDGFL3-205ENST00000568129 TYMSOSQ8TAI1 123 aa4.78□□□□□ -1.64
HDGFL3-205ENST00000568129 ANAPC11Q9NYG5 84 aa4.78□□□□□ -1.64
HDGFL3-205ENST00000568129 B5MCH6 92 aa4.77□□□□□ -1.65
HDGFL3-205ENST00000568129 SMCR5Q8TEV8 140 aa4.77□□□□□ -1.65
HDGFL3-205ENST00000568129 SPRR4Q96PI1 79 aa4.77□□□□□ -1.65
HDGFL3-205ENST00000568129 DDTP30046 118 aa4.76□□□□□ -1.65
HDGFL3-205ENST00000568129 LINC00483Q53H64 154 aa4.76□□□□□ -1.65
HDGFL3-205ENST00000568129 LINC00308Q8TCZ7 52 aa4.76□□□□□ -1.65
HDGFL3-205ENST00000568129 MIEN1Q9BRT3 115 aa4.76□□□□□ -1.65
HDGFL3-205ENST00000568129 C5orf52A6NGY3 159 aa4.75□□□□□ -1.65
HDGFL3-205ENST00000568129 KRTDAPP60985 99 aa4.75□□□□□ -1.65
HDGFL3-205ENST00000568129 SNRPEP62304 92 aaKnown RBP4.75□□□□□ -1.65
HDGFL3-205ENST00000568129 S100A12P80511 92 aa4.75□□□□□ -1.65
HDGFL3-205ENST00000568129 Q6ZRX8 168 aa4.75□□□□□ -1.65
HDGFL3-205ENST00000568129 HIST3H2BBQ8N257 126 aa4.75□□□□□ -1.65
HDGFL3-205ENST00000568129 Q9BRP9 147 aa4.75□□□□□ -1.65
HDGFL3-205ENST00000568129 HIGD2AQ9BW72 106 aa4.75□□□□□ -1.65
HDGFL3-205ENST00000568129 SPANXDQ9BXN6 97 aa4.75□□□□□ -1.65
HDGFL3-205ENST00000568129 TTTY13Q9BZ97 58 aa4.75□□□□□ -1.65
HDGFL3-205ENST00000568129 SPANXCQ9NY87 97 aa4.75□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 261.2 ms