RNA–Protein interactions for RNA: ENST00000560998.5

RABGGTA-220, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 1,997 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-220ENST00000560998 A0A087WZ39 114 aa9.64□□□□□ -0.87
RABGGTA-220ENST00000560998 CXCL6P80162 114 aa9.64□□□□□ -0.87
RABGGTA-220ENST00000560998 C9orf66Q5T8R8 295 aa9.64□□□□□ -0.87
RABGGTA-220ENST00000560998 FN1P02751 2386 aaKnown RBP9.64□□□□□ -0.87
RABGGTA-220ENST00000560998 IGHV3OR16-9A0A0B4J2B5 98 aa9.63□□□□□ -0.87
RABGGTA-220ENST00000560998 F8WEM9 126 aa9.63□□□□□ -0.87
RABGGTA-220ENST00000560998 Q6ZQT0 140 aa9.63□□□□□ -0.87
RABGGTA-220ENST00000560998 LINC00612Q8N6U2 182 aa9.63□□□□□ -0.87
RABGGTA-220ENST00000560998 VWFP04275 2813 aa9.62□□□□□ -0.87
RABGGTA-220ENST00000560998 TRBV7-6A0A0J9YX20 115 aa9.61□□□□□ -0.87
RABGGTA-220ENST00000560998 H3BQ85 93 aa9.61□□□□□ -0.87
RABGGTA-220ENST00000560998 PDE6GP18545 87 aa9.61□□□□□ -0.87
RABGGTA-220ENST00000560998 LINC01547P58512 204 aaPredicted RBP9.61□□□□□ -0.87
RABGGTA-220ENST00000560998 X6R8D5 127 aa9.61□□□□□ -0.87
RABGGTA-220ENST00000560998 ZNF561-AS1K7EIQ3 104 aa9.61□□□□□ -0.87
RABGGTA-220ENST00000560998 DEFB130BP0DP73 79 aa9.61□□□□□ -0.87
RABGGTA-220ENST00000560998 DEFB130AP0DP74 79 aa9.61□□□□□ -0.87
RABGGTA-220ENST00000560998 RBM3P98179 157 aaKnown RBP9.61□□□□□ -0.87
RABGGTA-220ENST00000560998 NANOS2P60321 138 aaKnown RBP9.59□□□□□ -0.87
RABGGTA-220ENST00000560998 RMI2Q96E14 147 aa9.59□□□□□ -0.87
RABGGTA-220ENST00000560998 HIVEP1P15822 2718 aa9.59□□□□□ -0.87
RABGGTA-220ENST00000560998 TRBV6-8A0A0A6YYG3 113 aa9.59□□□□□ -0.87
RABGGTA-220ENST00000560998 ERC2-IT1O76042 136 aa9.59□□□□□ -0.87
RABGGTA-220ENST00000560998 C6orf223Q8N319 242 aa9.59□□□□□ -0.87
RABGGTA-220ENST00000560998 PKIGQ9Y2B9 76 aa9.59□□□□□ -0.87
RABGGTA-220ENST00000560998 TENM1Q9UKZ4 2725 aa9.58□□□□□ -0.88
RABGGTA-220ENST00000560998 Q6ZVQ6 151 aa9.57□□□□□ -0.88
RABGGTA-220ENST00000560998 SNURFQ9Y675 71 aa9.57□□□□□ -0.88
RABGGTA-220ENST00000560998 V9GYY9 64 aa9.57□□□□□ -0.88
RABGGTA-220ENST00000560998 TRBV7-4A0A0J9YYF1 115 aa9.57□□□□□ -0.88
RABGGTA-220ENST00000560998 TRAV10A0A0B4J240 114 aa9.56□□□□□ -0.88
RABGGTA-220ENST00000560998 C6orf226Q5I0X4 101 aa9.56□□□□□ -0.88
RABGGTA-220ENST00000560998 C1orf195Q5TG92 126 aa9.56□□□□□ -0.88
RABGGTA-220ENST00000560998 Q8IZM0 81 aa9.56□□□□□ -0.88
RABGGTA-220ENST00000560998 MIFP14174 115 aa9.55□□□□□ -0.88
RABGGTA-220ENST00000560998 IGLV4-60A0A075B6I1 120 aa9.55□□□□□ -0.88
RABGGTA-220ENST00000560998 GYPEP15421 78 aa9.55□□□□□ -0.88
RABGGTA-220ENST00000560998 HAMPP81172 84 aa9.55□□□□□ -0.88
RABGGTA-220ENST00000560998 LINC00575Q6W349 94 aa9.55□□□□□ -0.88
RABGGTA-220ENST00000560998 COX17Q14061 63 aa9.54□□□□□ -0.88
RABGGTA-220ENST00000560998 BRK1Q8WUW1 75 aa9.54□□□□□ -0.88
RABGGTA-220ENST00000560998 LYRM9A8MSI8 78 aa9.54□□□□□ -0.88
RABGGTA-220ENST00000560998 APOC4P55056 127 aa9.53□□□□□ -0.88
RABGGTA-220ENST00000560998 DEFB135Q30KP9 77 aa9.53□□□□□ -0.88
RABGGTA-220ENST00000560998 NBEAL2Q6ZNJ1 2754 aa9.52□□□□□ -0.88
RABGGTA-220ENST00000560998 PRO0255Q9UI72 69 aa9.52□□□□□ -0.89
RABGGTA-220ENST00000560998 Q8N3U1 123 aa9.52□□□□□ -0.89
RABGGTA-220ENST00000560998 LINC00474Q9P2X8 69 aa9.52□□□□□ -0.89
RABGGTA-220ENST00000560998 LAMTOR3Q9UHA4 124 aa9.52□□□□□ -0.89
RABGGTA-220ENST00000560998 TEP1Q99973 2627 aaKnown RBP9.51□□□□□ -0.89
RABGGTA-220ENST00000560998 IGKV3OR2-268A0A0C4DH90 116 aa9.51□□□□□ -0.89
RABGGTA-220ENST00000560998 SEC61GP60059 68 aa9.51□□□□□ -0.89
RABGGTA-220ENST00000560998 ATRQ13535 2644 aa9.51□□□□□ -0.89
RABGGTA-220ENST00000560998 LINC00959A0A1B0GUT2 108 aa9.5□□□□□ -0.89
RABGGTA-220ENST00000560998 C6orf99Q4VX62 202 aa9.5□□□□□ -0.89
RABGGTA-220ENST00000560998 IGHV4-28A0A0C4DH34 117 aa9.5□□□□□ -0.89
RABGGTA-220ENST00000560998 DEFB4AO15263 64 aa9.5□□□□□ -0.89
RABGGTA-220ENST00000560998 NREPQ16612 68 aa9.5□□□□□ -0.89
RABGGTA-220ENST00000560998 TMEM254Q8TBM7 123 aa9.5□□□□□ -0.89
RABGGTA-220ENST00000560998 TM2D3Q9BRN9 247 aa9.49□□□□□ -0.89
RABGGTA-220ENST00000560998 MUC7Q8TAX7 377 aa9.48□□□□□ -0.89
RABGGTA-220ENST00000560998 A0A1B0GUV1 79 aa9.47□□□□□ -0.89
RABGGTA-220ENST00000560998 Q8NAQ8 132 aa9.47□□□□□ -0.89
RABGGTA-220ENST00000560998 C11orf68Q9H3H3 251 aaKnown RBP9.47□□□□□ -0.89
RABGGTA-220ENST00000560998 A0A096LPF7 62 aa9.46□□□□□ -0.89
RABGGTA-220ENST00000560998 DAD1P61803 113 aa9.46□□□□□ -0.9
RABGGTA-220ENST00000560998 ESRGQ1W209 222 aa9.46□□□□□ -0.9
RABGGTA-220ENST00000560998 CELA1Q9UNI1 258 aa9.45□□□□□ -0.9
RABGGTA-220ENST00000560998 M0R2N4 97 aa9.44□□□□□ -0.9
RABGGTA-220ENST00000560998 BPY2O14599 106 aa9.44□□□□□ -0.9
RABGGTA-220ENST00000560998 PRYO14603 147 aa9.44□□□□□ -0.9
RABGGTA-220ENST00000560998 IGHV4-30-4P0DP06 118 aa9.44□□□□□ -0.9
RABGGTA-220ENST00000560998 PRR3P79522 188 aaKnown RBP9.44□□□□□ -0.9
RABGGTA-220ENST00000560998 A0A0U1RQV1 116 aa9.43□□□□□ -0.9
RABGGTA-220ENST00000560998 FUSP35637 526 aaKnown RBP eCLIP9.42□□□□□ -0.9
RABGGTA-220ENST00000560998 TRRAPQ9Y4A5 3859 aa9.41□□□□□ -0.9
RABGGTA-220ENST00000560998 SPART-AS1P0CW21 52 aa9.41□□□□□ -0.9
RABGGTA-220ENST00000560998 FAM229BQ4G0N7 80 aa9.41□□□□□ -0.9
RABGGTA-220ENST00000560998 CLPSL2Q6UWE3 100 aa9.41□□□□□ -0.9
RABGGTA-220ENST00000560998 KIAA0087Q14695 138 aa9.4□□□□□ -0.9
RABGGTA-220ENST00000560998 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.4□□□□□ -0.9
RABGGTA-220ENST00000560998 PRR15Q8IV56 129 aa9.4□□□□□ -0.9
RABGGTA-220ENST00000560998 IGLV6-57P01721 117 aa9.39□□□□□ -0.91
RABGGTA-220ENST00000560998 Q6ZQY7 126 aa9.39□□□□□ -0.91
RABGGTA-220ENST00000560998 MPLKIPQ8TAP9 179 aa9.39□□□□□ -0.91
RABGGTA-220ENST00000560998 F8P00451 2351 aa9.39□□□□□ -0.91
RABGGTA-220ENST00000560998 LINC00269Q8N2A0 174 aa9.38□□□□□ -0.91
RABGGTA-220ENST00000560998 OCR1Q9BZK8 76 aa9.38□□□□□ -0.91
RABGGTA-220ENST00000560998 HTN3P15516 51 aa9.37□□□□□ -0.91
RABGGTA-220ENST00000560998 Q6ZTC4 211 aa9.37□□□□□ -0.91
RABGGTA-220ENST00000560998 CD164L2Q6UWJ8 174 aa9.37□□□□□ -0.91
RABGGTA-220ENST00000560998 COX7BP24311 80 aa9.36□□□□□ -0.91
RABGGTA-220ENST00000560998 KRTAP10-11P60412 298 aa9.36□□□□□ -0.91
RABGGTA-220ENST00000560998 OXLD1Q5BKU9 147 aa9.36□□□□□ -0.91
RABGGTA-220ENST00000560998 ANGP03950 147 aaKnown RBP9.35□□□□□ -0.91
RABGGTA-220ENST00000560998 SCXQ7RTU7 201 aa9.35□□□□□ -0.91
RABGGTA-220ENST00000560998 REG3AQ06141 175 aa9.35□□□□□ -0.91
RABGGTA-220ENST00000560998 KRTAP24-1Q3LI83 254 aa9.35□□□□□ -0.91
RABGGTA-220ENST00000560998 Q8NDZ9 215 aa9.35□□□□□ -0.91
RABGGTA-220ENST00000560998 IGKV4-1P06312 121 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms