RNA–Protein interactions for RNA: ENST00000555573.5

KTN1-223, Transcript of kinectin 1, human

TSL 2 BASIC

Gene KTN1, Length 1,712 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
KTN1-223	ENST00000555573	SPTBN2	O15020	2390 aa		0.75	□□□□□ -2.29
KTN1-223	ENST00000555573	PPRC1	Q5VV67	1664 aa	Known RBP	0.75	□□□□□ -2.29
KTN1-223	ENST00000555573	UBR3	Q6ZT12	1888 aa		0.75	□□□□□ -2.29
KTN1-223	ENST00000555573	SYNE2	Q8WXH0	6885 aa	Known RBP	0.75	□□□□□ -2.29
KTN1-223	ENST00000555573	BVES-AS1	Q5T3Y7	98 aa		0.75	□□□□□ -2.29
KTN1-223	ENST00000555573	USF3	Q68DE3	2245 aa		0.75	□□□□□ -2.29
KTN1-223	ENST00000555573	ZNF292	O60281	2723 aa		0.74	□□□□□ -2.29
KTN1-223	ENST00000555573	POLR1A	O95602	1720 aa	Predicted RBP	0.74	□□□□□ -2.29
KTN1-223	ENST00000555573	ABCA12	Q86UK0	2595 aa		0.74	□□□□□ -2.29
KTN1-223	ENST00000555573	PTPN23	Q9H3S7	1636 aa		0.74	□□□□□ -2.29
KTN1-223	ENST00000555573	ABCC1	P33527	1531 aa		0.74	□□□□□ -2.29
KTN1-223	ENST00000555573		K7EQZ3	153 aa		0.74	□□□□□ -2.29
KTN1-223	ENST00000555573	SPINK6	Q6UWN8	80 aa		0.74	□□□□□ -2.29
KTN1-223	ENST00000555573	USMG5	Q96IX5	58 aa		0.74	□□□□□ -2.29
KTN1-223	ENST00000555573	KRTAP2-3	P0C7H8	128 aa		0.73	□□□□□ -2.29
KTN1-223	ENST00000555573	KRTAP2-4	Q9BYR9	128 aa		0.73	□□□□□ -2.29
KTN1-223	ENST00000555573	KRTAP2-1	Q9BYU5	128 aa		0.73	□□□□□ -2.29
KTN1-223	ENST00000555573	ZNF831	Q5JPB2	1677 aa		0.73	□□□□□ -2.29
KTN1-223	ENST00000555573	URB2	Q14146	1524 aa	Known RBP	0.73	□□□□□ -2.29
KTN1-223	ENST00000555573	PIEZO2	Q9H5I5	2752 aa		0.73	□□□□□ -2.29
KTN1-223	ENST00000555573	COX6B1	P14854	86 aa		0.72	□□□□□ -2.29
KTN1-223	ENST00000555573	ABCA8	O94911	1581 aa		0.72	□□□□□ -2.29
KTN1-223	ENST00000555573	NKTR	P30414	1462 aa	Known RBP	0.72	□□□□□ -2.29
KTN1-223	ENST00000555573	BCOR	Q6W2J9	1755 aa		0.72	□□□□□ -2.29
KTN1-223	ENST00000555573	CELSR2	Q9HCU4	2923 aa		0.71	□□□□□ -2.3
KTN1-223	ENST00000555573	CEP170B	Q9Y4F5	1589 aa	Predicted RBP	0.71	□□□□□ -2.3
KTN1-223	ENST00000555573	SCN11A	Q9UI33	1791 aa		0.71	□□□□□ -2.3
KTN1-223	ENST00000555573	TIAM2	Q8IVF5	1701 aa		0.71	□□□□□ -2.3
KTN1-223	ENST00000555573	SPTY2D1-AS1	A0A0U1RR47	76 aa		0.71	□□□□□ -2.3
KTN1-223	ENST00000555573	PRH1	P02810	166 aa		0.71	□□□□□ -2.3
KTN1-223	ENST00000555573	GAFA1	Q96PS6	74 aa		0.71	□□□□□ -2.3
KTN1-223	ENST00000555573	CRIPT	Q9P021	101 aa		0.71	□□□□□ -2.3
KTN1-223	ENST00000555573	ANK2	Q01484	3957 aa		0.7	□□□□□ -2.3
KTN1-223	ENST00000555573	WFDC9	Q8NEX5	89 aa		0.7	□□□□□ -2.3
KTN1-223	ENST00000555573	CACNA1E	Q15878	2313 aa		0.7	□□□□□ -2.3
KTN1-223	ENST00000555573	TENM3	Q9P273	2699 aa		0.7	□□□□□ -2.3
KTN1-223	ENST00000555573	ANKAR	Q7Z5J8	1434 aa		0.7	□□□□□ -2.3
KTN1-223	ENST00000555573	MYO5C	Q9NQX4	1742 aa		0.7	□□□□□ -2.3
KTN1-223	ENST00000555573	CFD	P00746	253 aa	Predicted RBP	0.69	□□□□□ -2.3
KTN1-223	ENST00000555573	COX8A	P10176	69 aa		0.69	□□□□□ -2.3
KTN1-223	ENST00000555573		Q5VSD8	79 aa		0.69	□□□□□ -2.3
KTN1-223	ENST00000555573	TPR	P12270	2363 aa	Known RBP	0.69	□□□□□ -2.3
KTN1-223	ENST00000555573	CFAP43	Q8NDM7	1665 aa		0.69	□□□□□ -2.3
KTN1-223	ENST00000555573	IQGAP3	Q86VI3	1631 aa		0.69	□□□□□ -2.3
KTN1-223	ENST00000555573	USP32	Q8NFA0	1604 aa		0.69	□□□□□ -2.3
KTN1-223	ENST00000555573	TRAV21	A0A0B4J279	112 aa		0.69	□□□□□ -2.3
KTN1-223	ENST00000555573		I3L3M4	83 aa		0.69	□□□□□ -2.3
KTN1-223	ENST00000555573	COX7B	P24311	80 aa		0.69	□□□□□ -2.3
KTN1-223	ENST00000555573	ATP5EP2	Q5VTU8	51 aa		0.69	□□□□□ -2.3
KTN1-223	ENST00000555573	TNC	P24821	2201 aa		0.69	□□□□□ -2.3
KTN1-223	ENST00000555573	MAGI3	Q5TCQ9	1506 aa		0.69	□□□□□ -2.3
KTN1-223	ENST00000555573	ARFGEF2	Q9Y6D5	1785 aa		0.68	□□□□□ -2.3
KTN1-223	ENST00000555573	NCOA2	Q15596	1464 aa		0.68	□□□□□ -2.3
KTN1-223	ENST00000555573	DOT1L	Q8TEK3	1739 aa		0.68	□□□□□ -2.3
KTN1-223	ENST00000555573	PTPRZ1	P23471	2315 aa	Predicted RBP	0.68	□□□□□ -2.3
KTN1-223	ENST00000555573	PTPRQ	Q9UMZ3	2332 aa		0.68	□□□□□ -2.3
KTN1-223	ENST00000555573	NDUFB1	O75438	58 aa		0.68	□□□□□ -2.3
KTN1-223	ENST00000555573	SMR3A	Q99954	134 aa		0.68	□□□□□ -2.3
KTN1-223	ENST00000555573	PREX1	Q8TCU6	1659 aa		0.68	□□□□□ -2.3
KTN1-223	ENST00000555573		Q5BKY6	102 aa		0.67	□□□□□ -2.3
KTN1-223	ENST00000555573	FSIP2	Q5CZC0	6907 aa		0.67	□□□□□ -2.3
KTN1-223	ENST00000555573		A0A087WXM4	84 aa		0.67	□□□□□ -2.3
KTN1-223	ENST00000555573	DEFB121	Q5J5C9	76 aa		0.67	□□□□□ -2.3
KTN1-223	ENST00000555573	C18orf32	Q8TCD1	76 aa		0.67	□□□□□ -2.3
KTN1-223	ENST00000555573	FXYD6	Q9H0Q3	95 aa		0.67	□□□□□ -2.3
KTN1-223	ENST00000555573	PCLO	Q9Y6V0	5065 aa		0.66	□□□□□ -2.3
KTN1-223	ENST00000555573	MDN1	Q9NU22	5596 aa		0.66	□□□□□ -2.3
KTN1-223	ENST00000555573	CCDC88B	A6NC98	1476 aa		0.66	□□□□□ -2.3
KTN1-223	ENST00000555573	CPSF4L	A6NMK7	179 aa	Known RBP	0.66	□□□□□ -2.3
KTN1-223	ENST00000555573	SPRR1B	P22528	89 aa		0.66	□□□□□ -2.3
KTN1-223	ENST00000555573	RPL38	P63173	70 aa	Known RBP	0.66	□□□□□ -2.3
KTN1-223	ENST00000555573	CSMD3	Q7Z407	3707 aa		0.66	□□□□□ -2.3
KTN1-223	ENST00000555573	SPRR1A	P35321	89 aa		0.65	□□□□□ -2.31
KTN1-223	ENST00000555573	DEFB109B	Q30KR1	87 aa		0.65	□□□□□ -2.31
KTN1-223	ENST00000555573	UGGT2	Q9NYU1	1516 aa		0.65	□□□□□ -2.31
KTN1-223	ENST00000555573	SPTBN1	Q01082	2364 aa	Known RBP	0.65	□□□□□ -2.31
KTN1-223	ENST00000555573	SPINK1	P00995	79 aa		0.64	□□□□□ -2.31
KTN1-223	ENST00000555573	SMIM13	P0DJ93	91 aa		0.64	□□□□□ -2.31
KTN1-223	ENST00000555573	MRPL34	Q9BQ48	92 aa	Known RBP	0.64	□□□□□ -2.31
KTN1-223	ENST00000555573	COL6A3	P12111	3177 aa		0.64	□□□□□ -2.31
KTN1-223	ENST00000555573	IFI27	P40305	119 aa	Predicted RBP	0.63	□□□□□ -2.31
KTN1-223	ENST00000555573	DEFB105A	Q8NG35	78 aa		0.63	□□□□□ -2.31
KTN1-223	ENST00000555573	REV3L	O60673	3130 aa		0.63	□□□□□ -2.31
KTN1-223	ENST00000555573	GVINP1	Q7Z2Y8	2422 aa		0.63	□□□□□ -2.31
KTN1-223	ENST00000555573	PLCH1	Q4KWH8	1693 aa		0.62	□□□□□ -2.31
KTN1-223	ENST00000555573	NWD1	Q149M9	1564 aa		0.62	□□□□□ -2.31
KTN1-223	ENST00000555573	CLIP1	P30622	1438 aa		0.62	□□□□□ -2.31
KTN1-223	ENST00000555573	PKDREJ	Q9NTG1	2253 aa		0.62	□□□□□ -2.31
KTN1-223	ENST00000555573	SMCO4	Q9NRQ5	59 aa		0.62	□□□□□ -2.31
KTN1-223	ENST00000555573	APLN	Q9ULZ1	77 aa		0.62	□□□□□ -2.31
KTN1-223	ENST00000555573	NES	P48681	1621 aa		0.62	□□□□□ -2.31
KTN1-223	ENST00000555573	TNRC6C	Q9HCJ0	1690 aa	Known RBP	0.62	□□□□□ -2.31
KTN1-223	ENST00000555573	RICTOR	Q6R327	1708 aa		0.62	□□□□□ -2.31
KTN1-223	ENST00000555573	CACNA1A	O00555	2505 aa		0.62	□□□□□ -2.31
KTN1-223	ENST00000555573	OTOG	Q6ZRI0	2925 aa		0.62	□□□□□ -2.31
KTN1-223	ENST00000555573	UMAD1	C9J7I0	102 aa		0.61	□□□□□ -2.31
KTN1-223	ENST00000555573	IFI6	P09912	130 aa		0.61	□□□□□ -2.31
KTN1-223	ENST00000555573	IGF2R	P11717	2491 aa		0.61	□□□□□ -2.31
KTN1-223	ENST00000555573	AKAP6	Q13023	2319 aa		0.61	□□□□□ -2.31
KTN1-223	ENST00000555573	CCL22	O00626	93 aa		0.61	□□□□□ -2.31

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