RNA–Protein interactions for RNA: ENST00000536513.5

ABCA4-207, Transcript of ATP binding cassette subfamily A member 4, humanhuman

TSL 1 (best) BASIC

Gene ABCA4, Length 3,740 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA4-207ENST00000536513 MED14OSP0DP75 135 aa5.8□□□□□ -1.48
ABCA4-207ENST00000536513 TRBV7-7A0A0K0K1E9 115 aa5.8□□□□□ -1.48
ABCA4-207ENST00000536513 ENHOQ6UWT2 76 aa5.8□□□□□ -1.48
ABCA4-207ENST00000536513 MPLKIPQ8TAP9 179 aa5.79□□□□□ -1.48
ABCA4-207ENST00000536513 ORMDL1Q9P0S3 153 aa5.79□□□□□ -1.48
ABCA4-207ENST00000536513 KLK12Q9UKR0 248 aa5.79□□□□□ -1.48
ABCA4-207ENST00000536513 LINC01546A6NGU7 62 aa5.79□□□□□ -1.48
ABCA4-207ENST00000536513 PRO0255Q9UI72 69 aa5.79□□□□□ -1.48
ABCA4-207ENST00000536513 SNURFQ9Y675 71 aa5.78□□□□□ -1.48
ABCA4-207ENST00000536513 OXTP01178 125 aa5.78□□□□□ -1.48
ABCA4-207ENST00000536513 FHL2Q14192 279 aa5.78□□□□□ -1.48
ABCA4-207ENST00000536513 CSNK1G2-AS1Q8NCQ2 148 aa5.78□□□□□ -1.48
ABCA4-207ENST00000536513 DEFB131BA0A096LNP1 70 aa5.77□□□□□ -1.49
ABCA4-207ENST00000536513 LINC00269Q8N2A0 174 aa5.77□□□□□ -1.49
ABCA4-207ENST00000536513 IGLV4-60A0A075B6I1 120 aa5.77□□□□□ -1.49
ABCA4-207ENST00000536513 NTM-AS1Q6ZSK4 140 aa5.77□□□□□ -1.49
ABCA4-207ENST00000536513 H0YGX0 51 aa5.76□□□□□ -1.49
ABCA4-207ENST00000536513 UPK3BQ9BT76 320 aa5.76□□□□□ -1.49
ABCA4-207ENST00000536513 PLAC8L1A1L4L8 177 aa5.75□□□□□ -1.49
ABCA4-207ENST00000536513 CXCL5P42830 114 aa5.75□□□□□ -1.49
ABCA4-207ENST00000536513 COX7B2Q8TF08 81 aa5.75□□□□□ -1.49
ABCA4-207ENST00000536513 DPH3Q96FX2 82 aa5.75□□□□□ -1.49
ABCA4-207ENST00000536513 TRBV6-5A0A0K0K1A5 114 aa5.75□□□□□ -1.49
ABCA4-207ENST00000536513 KPRPQ5T749 579 aaPredicted RBP5.75□□□□□ -1.49
ABCA4-207ENST00000536513 SCXQ7RTU7 201 aa5.75□□□□□ -1.49
ABCA4-207ENST00000536513 PRR26Q8N8Z3 221 aa5.75□□□□□ -1.49
ABCA4-207ENST00000536513 LINC00846Q9NV44 126 aa5.75□□□□□ -1.49
ABCA4-207ENST00000536513 RPS28P62857 69 aaKnown RBP5.74□□□□□ -1.49
ABCA4-207ENST00000536513 UBE2DNLQ8IWF7 75 aa5.74□□□□□ -1.49
ABCA4-207ENST00000536513 SMCR5Q8TEV8 140 aa5.74□□□□□ -1.49
ABCA4-207ENST00000536513 TRBV6-8A0A0A6YYG3 113 aa5.74□□□□□ -1.49
ABCA4-207ENST00000536513 NDUFA1O15239 70 aa5.74□□□□□ -1.49
ABCA4-207ENST00000536513 COX6A2Q02221 97 aa5.74□□□□□ -1.49
ABCA4-207ENST00000536513 CHCHD7Q9BUK0 85 aa5.74□□□□□ -1.49
ABCA4-207ENST00000536513 PRYO14603 147 aa5.74□□□□□ -1.49
ABCA4-207ENST00000536513 MIFP14174 115 aa5.74□□□□□ -1.49
ABCA4-207ENST00000536513 MRPS36P82909 103 aaKnown RBP5.74□□□□□ -1.49
ABCA4-207ENST00000536513 IGKV2D-24A0A075B6R9 120 aa5.73□□□□□ -1.49
ABCA4-207ENST00000536513 UBE2D4Q9Y2X8 147 aa5.73□□□□□ -1.49
ABCA4-207ENST00000536513 PYGO1Q9Y3Y4 419 aa5.73□□□□□ -1.49
ABCA4-207ENST00000536513 K7EIL1 84 aa5.73□□□□□ -1.49
ABCA4-207ENST00000536513 CRYGAP11844 174 aa5.73□□□□□ -1.49
ABCA4-207ENST00000536513 HIGD2BQ4VC39 106 aa5.72□□□□□ -1.49
ABCA4-207ENST00000536513 Q8NAQ8 132 aa5.72□□□□□ -1.49
ABCA4-207ENST00000536513 TRBV6-4A0A1B0GX49 114 aa5.72□□□□□ -1.49
ABCA4-207ENST00000536513 M0R2N4 97 aa5.72□□□□□ -1.49
ABCA4-207ENST00000536513 SMIM11BQ8TCY0 68 aa5.72□□□□□ -1.49
ABCA4-207ENST00000536513 AMELXQ99217 191 aa5.72□□□□□ -1.49
ABCA4-207ENST00000536513 A0A087WYN8 130 aa5.71□□□□□ -1.49
ABCA4-207ENST00000536513 TRBV10-1A0A0K0K1A3 114 aa5.71□□□□□ -1.49
ABCA4-207ENST00000536513 SOSTDC1Q6X4U4 206 aa5.71□□□□□ -1.49
ABCA4-207ENST00000536513 WFDC10BQ8IUB3 73 aa5.71□□□□□ -1.49
ABCA4-207ENST00000536513 LYRM9A8MSI8 78 aa5.71□□□□□ -1.5
ABCA4-207ENST00000536513 Q6JHZ5 121 aa5.71□□□□□ -1.5
ABCA4-207ENST00000536513 JMJD7-PLA2G4BH0Y9G9 81 aa5.7□□□□□ -1.5
ABCA4-207ENST00000536513 SS18Q15532 418 aa5.7□□□□□ -1.5
ABCA4-207ENST00000536513 FAM218AQ96MZ4 157 aa5.7□□□□□ -1.5
ABCA4-207ENST00000536513 TIMM17BO60830 172 aa5.7□□□□□ -1.5
ABCA4-207ENST00000536513 F8WEM9 126 aa5.7□□□□□ -1.5
ABCA4-207ENST00000536513 REG3AQ06141 175 aa5.69□□□□□ -1.5
ABCA4-207ENST00000536513 A8MTW9 85 aa5.69□□□□□ -1.5
ABCA4-207ENST00000536513 LINC00242Q5T6M2 205 aa5.69□□□□□ -1.5
ABCA4-207ENST00000536513 C9orf116Q5BN46 136 aaPredicted RBP5.68□□□□□ -1.5
ABCA4-207ENST00000536513 LRCOL1A6NCL2 159 aa5.68□□□□□ -1.5
ABCA4-207ENST00000536513 CDC42SE2Q9NRR3 84 aa5.68□□□□□ -1.5
ABCA4-207ENST00000536513 NDUFC2-KCTD14E9PQ53 114 aa5.68□□□□□ -1.5
ABCA4-207ENST00000536513 TMEM256-PLSCR3K7ERE1 68 aa5.68□□□□□ -1.5
ABCA4-207ENST00000536513 PLA2G2DQ9UNK4 145 aa5.68□□□□□ -1.5
ABCA4-207ENST00000536513 SMIM26A0A096LP01 95 aa5.67□□□□□ -1.5
ABCA4-207ENST00000536513 RMI2Q96E14 147 aa5.67□□□□□ -1.5
ABCA4-207ENST00000536513 PSCAO43653 123 aa5.67□□□□□ -1.5
ABCA4-207ENST00000536513 CHCHD10Q8WYQ3 142 aaPredicted RBP5.67□□□□□ -1.5
ABCA4-207ENST00000536513 CSMD3Q7Z407 3707 aa5.67□□□□□ -1.5
ABCA4-207ENST00000536513 LITAFQ99732 161 aa5.66□□□□□ -1.5
ABCA4-207ENST00000536513 SMIM1B2RUZ4 78 aa5.66□□□□□ -1.5
ABCA4-207ENST00000536513 CCL18P55774 89 aa5.66□□□□□ -1.5
ABCA4-207ENST00000536513 PRR3P79522 188 aaKnown RBP5.66□□□□□ -1.5
ABCA4-207ENST00000536513 LINC00337Q8N6G1 96 aa5.66□□□□□ -1.5
ABCA4-207ENST00000536513 ESRGQ1W209 222 aa5.65□□□□□ -1.5
ABCA4-207ENST00000536513 C6orf223Q8N319 242 aa5.65□□□□□ -1.5
ABCA4-207ENST00000536513 SERP1Q9Y6X1 66 aa5.65□□□□□ -1.5
ABCA4-207ENST00000536513 IGLV2-33A0A075B6J2 118 aaPredicted RBP5.65□□□□□ -1.5
ABCA4-207ENST00000536513 RPL28P46779 137 aaKnown RBP5.65□□□□□ -1.5
ABCA4-207ENST00000536513 C6orf99Q4VX62 202 aa5.65□□□□□ -1.5
ABCA4-207ENST00000536513 LINC00959A0A1B0GUT2 108 aa5.65□□□□□ -1.51
ABCA4-207ENST00000536513 XAGE1AQ9HD64 81 aa5.65□□□□□ -1.51
ABCA4-207ENST00000536513 LYPD5Q6UWN5 251 aa5.64□□□□□ -1.51
ABCA4-207ENST00000536513 CCKP06307 115 aa5.64□□□□□ -1.51
ABCA4-207ENST00000536513 PRR4Q16378 134 aa5.64□□□□□ -1.51
ABCA4-207ENST00000536513 ATP5EP2Q5VTU8 51 aa5.63□□□□□ -1.51
ABCA4-207ENST00000536513 FUSP35637 526 aaKnown RBP eCLIP5.63□□□□□ -1.51
ABCA4-207ENST00000536513 DEFB105AQ8NG35 78 aa5.63□□□□□ -1.51
ABCA4-207ENST00000536513 CYSTM1Q9H1C7 97 aa5.63□□□□□ -1.51
ABCA4-207ENST00000536513 Q5XG85 94 aa5.63□□□□□ -1.51
ABCA4-207ENST00000536513 FAM30AQ9NZY2 134 aa5.63□□□□□ -1.51
ABCA4-207ENST00000536513 TRAV7A0A075B6U4 112 aa5.62□□□□□ -1.51
ABCA4-207ENST00000536513 SPAG11BQ08648 103 aa5.62□□□□□ -1.51
ABCA4-207ENST00000536513 NREPQ16612 68 aa5.61□□□□□ -1.51
ABCA4-207ENST00000536513 COL7A1Q02388 2944 aa5.61□□□□□ -1.51
ABCA4-207ENST00000536513 TRAV10A0A0B4J240 114 aa5.61□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms