RNA–Protein interactions for RNA: ENST00000535302.6

SPG11-203, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SPG11, Length 7,288 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-203ENST00000535302 APLNQ9ULZ1 77 aa8.73□□□□□ -1.01
SPG11-203ENST00000535302 ACYP2P14621 99 aa8.73□□□□□ -1.01
SPG11-203ENST00000535302 COL27A1Q8IZC6 1860 aaPredicted RBP8.72□□□□□ -1.01
SPG11-203ENST00000535302 COX8CQ7Z4L0 72 aa8.71□□□□□ -1.02
SPG11-203ENST00000535302 MYO18BQ8IUG5 2567 aa8.71□□□□□ -1.02
SPG11-203ENST00000535302 KIF25-AS1Q9Y6Z4 181 aa8.71□□□□□ -1.02
SPG11-203ENST00000535302 FAM229AH3BQW9 127 aa8.71□□□□□ -1.02
SPG11-203ENST00000535302 Q8N2B8 174 aa8.7□□□□□ -1.02
SPG11-203ENST00000535302 C9orf92A6NGG3 77 aa8.69□□□□□ -1.02
SPG11-203ENST00000535302 J3QL48 77 aa8.69□□□□□ -1.02
SPG11-203ENST00000535302 RTL8CO15255 209 aa8.68□□□□□ -1.02
SPG11-203ENST00000535302 KRTAP24-1Q3LI83 254 aa8.68□□□□□ -1.02
SPG11-203ENST00000535302 FAM168BA1KXE4 195 aa8.68□□□□□ -1.02
SPG11-203ENST00000535302 COX6B2Q6YFQ2 88 aa8.68□□□□□ -1.02
SPG11-203ENST00000535302 FAM218AQ96MZ4 157 aa8.67□□□□□ -1.02
SPG11-203ENST00000535302 LINC00315P59091 139 aa8.67□□□□□ -1.02
SPG11-203ENST00000535302 LINC00476Q8WZB0 136 aa8.66□□□□□ -1.02
SPG11-203ENST00000535302 CENPFP49454 3210 aa8.66□□□□□ -1.02
SPG11-203ENST00000535302 EPM2AB3EWF7 344 aa8.65□□□□□ -1.02
SPG11-203ENST00000535302 LRRK2Q5S007 2527 aa8.64□□□□□ -1.03
SPG11-203ENST00000535302 NHLRC4P0CG21 123 aaPredicted RBP8.64□□□□□ -1.03
SPG11-203ENST00000535302 MYO9AB2RTY4 2548 aa8.64□□□□□ -1.03
SPG11-203ENST00000535302 CXCL6P80162 114 aa8.63□□□□□ -1.03
SPG11-203ENST00000535302 LINC01554Q52M75 96 aa8.63□□□□□ -1.03
SPG11-203ENST00000535302 TM2D3Q9BRN9 247 aa8.63□□□□□ -1.03
SPG11-203ENST00000535302 IGHV3OR16-9A0A0B4J2B5 98 aa8.63□□□□□ -1.03
SPG11-203ENST00000535302 IGLV6-57P01721 117 aa8.62□□□□□ -1.03
SPG11-203ENST00000535302 CDIP1Q9H305 208 aa8.62□□□□□ -1.03
SPG11-203ENST00000535302 FAM19A4Q96LR4 140 aa8.62□□□□□ -1.03
SPG11-203ENST00000535302 IGLV5-39A0A0G2JS06 123 aa8.61□□□□□ -1.03
SPG11-203ENST00000535302 F8WDY8 70 aa8.61□□□□□ -1.03
SPG11-203ENST00000535302 SMR3BP02814 79 aaPredicted RBP8.6□□□□□ -1.03
SPG11-203ENST00000535302 COL4A2P08572 1712 aa8.6□□□□□ -1.03
SPG11-203ENST00000535302 A0A0G2JQZ4 141 aa8.6□□□□□ -1.03
SPG11-203ENST00000535302 A0A1W2PNN7 141 aa8.6□□□□□ -1.03
SPG11-203ENST00000535302 LINC01561Q8N1V8 128 aa8.59□□□□□ -1.03
SPG11-203ENST00000535302 LINC00588Q9Y4M8 146 aa8.58□□□□□ -1.04
SPG11-203ENST00000535302 DSCR10P59022 87 aa8.58□□□□□ -1.04
SPG11-203ENST00000535302 FN1P02751 2386 aaKnown RBP8.58□□□□□ -1.04
SPG11-203ENST00000535302 C8orf87E5RJ46 101 aa8.57□□□□□ -1.04
SPG11-203ENST00000535302 A0A0D9SG42 100 aa8.57□□□□□ -1.04
SPG11-203ENST00000535302 LINC01600Q96MT4 127 aa8.56□□□□□ -1.04
SPG11-203ENST00000535302 JMJD1CQ15652 2540 aa8.56□□□□□ -1.04
SPG11-203ENST00000535302 TLN1Q9Y490 2541 aaKnown RBP8.55□□□□□ -1.04
SPG11-203ENST00000535302 ANAPC11Q9NYG5 84 aa8.55□□□□□ -1.04
SPG11-203ENST00000535302 LINC01546A6NGU7 62 aa8.55□□□□□ -1.04
SPG11-203ENST00000535302 SMCPP49901 116 aaPredicted RBP8.55□□□□□ -1.04
SPG11-203ENST00000535302 K7EQZ3 153 aa8.54□□□□□ -1.04
SPG11-203ENST00000535302 ZFYVE26Q68DK2 2539 aa8.54□□□□□ -1.04
SPG11-203ENST00000535302 NBDYA0A0U1RRE5 68 aa8.54□□□□□ -1.04
SPG11-203ENST00000535302 TP53AIP1Q9HCN2 124 aa8.54□□□□□ -1.04
SPG11-203ENST00000535302 Q6ZRP5 223 aa8.54□□□□□ -1.04
SPG11-203ENST00000535302 ELOF1P60002 83 aaKnown RBP8.53□□□□□ -1.04
SPG11-203ENST00000535302 DNAH10OSP0CZ25 163 aa8.53□□□□□ -1.04
SPG11-203ENST00000535302 Q6ZQT0 140 aa8.53□□□□□ -1.04
SPG11-203ENST00000535302 Q8NAQ8 132 aa8.53□□□□□ -1.04
SPG11-203ENST00000535302 TRAV22A0A0B4J277 110 aa8.53□□□□□ -1.04
SPG11-203ENST00000535302 OBSCN-AS1Q96MR7 158 aa8.53□□□□□ -1.04
SPG11-203ENST00000535302 C9orf129Q5T035 196 aaKnown RBP8.53□□□□□ -1.04
SPG11-203ENST00000535302 PRO0628Q9UI54 55 aa8.52□□□□□ -1.05
SPG11-203ENST00000535302 Q8NBF4 154 aa8.52□□□□□ -1.05
SPG11-203ENST00000535302 TRBV7-4A0A0J9YYF1 115 aa8.51□□□□□ -1.05
SPG11-203ENST00000535302 Q6ZRX8 168 aa8.51□□□□□ -1.05
SPG11-203ENST00000535302 A8MUN3 132 aa8.5□□□□□ -1.05
SPG11-203ENST00000535302 COA5Q86WW8 74 aa8.48□□□□□ -1.05
SPG11-203ENST00000535302 ABCA12Q86UK0 2595 aa8.47□□□□□ -1.05
SPG11-203ENST00000535302 KRTAP10-11P60412 298 aa8.47□□□□□ -1.05
SPG11-203ENST00000535302 IGLV5-45A0A087WSX0 123 aa8.46□□□□□ -1.05
SPG11-203ENST00000535302 BCE1O60756 84 aa8.46□□□□□ -1.05
SPG11-203ENST00000535302 CRIPTQ9P021 101 aa8.46□□□□□ -1.06
SPG11-203ENST00000535302 PIEZO1Q92508 2521 aa8.45□□□□□ -1.06
SPG11-203ENST00000535302 UTRNP46939 3433 aa8.44□□□□□ -1.06
SPG11-203ENST00000535302 TLN2Q9Y4G6 2542 aa8.43□□□□□ -1.06
SPG11-203ENST00000535302 H3BNG1 76 aa8.43□□□□□ -1.06
SPG11-203ENST00000535302 PCSK5Q92824 1860 aa8.42□□□□□ -1.06
SPG11-203ENST00000535302 ZNF575Q86XF7 245 aa8.42□□□□□ -1.06
SPG11-203ENST00000535302 MRPL34Q9BQ48 92 aaKnown RBP8.41□□□□□ -1.06
SPG11-203ENST00000535302 IGLV5-37A0A075B6J1 123 aa8.41□□□□□ -1.06
SPG11-203ENST00000535302 GVQW2A0A096LPI5 108 aaPredicted RBP8.4□□□□□ -1.06
SPG11-203ENST00000535302 KRTAP10-3P60369 221 aa8.4□□□□□ -1.06
SPG11-203ENST00000535302 PRO0461Q9UI25 63 aa8.4□□□□□ -1.06
SPG11-203ENST00000535302 F8P00451 2351 aa8.4□□□□□ -1.06
SPG11-203ENST00000535302 ACANP16112 2415 aa8.4□□□□□ -1.06
SPG11-203ENST00000535302 Q8N1X5 172 aa8.39□□□□□ -1.07
SPG11-203ENST00000535302 MIR22HGQ0VDD5 57 aa8.39□□□□□ -1.07
SPG11-203ENST00000535302 A8MWP4 228 aa8.39□□□□□ -1.07
SPG11-203ENST00000535302 C15orf56Q8N910 161 aa8.39□□□□□ -1.07
SPG11-203ENST00000535302 VPREB1P12018 145 aa8.38□□□□□ -1.07
SPG11-203ENST00000535302 WWC2-AS2Q96NR7 200 aa8.38□□□□□ -1.07
SPG11-203ENST00000535302 K7EIL1 84 aa8.38□□□□□ -1.07
SPG11-203ENST00000535302 LITAFQ99732 161 aa8.37□□□□□ -1.07
SPG11-203ENST00000535302 LINC00304Q8N9R0 145 aa8.36□□□□□ -1.07
SPG11-203ENST00000535302 SETD2Q9BYW2 2564 aaPredicted RBP8.36□□□□□ -1.07
SPG11-203ENST00000535302 EIF4EBP3O60516 100 aaPredicted RBP8.36□□□□□ -1.07
SPG11-203ENST00000535302 LOC110117498A0A087WWA1 95 aa8.36□□□□□ -1.07
SPG11-203ENST00000535302 UQCR11O14957 56 aa8.35□□□□□ -1.07
SPG11-203ENST00000535302 IGFL1Q6UW32 110 aa8.35□□□□□ -1.07
SPG11-203ENST00000535302 ANKRD11Q6UB99 2663 aaPredicted RBP8.35□□□□□ -1.07
SPG11-203ENST00000535302 CSNK1G2-AS1Q8NCQ2 148 aa8.34□□□□□ -1.07
SPG11-203ENST00000535302 CEP295Q9C0D2 2601 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms