RNA–Protein interactions for RNA: ENST00000534049.5

ITGB1-219, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 562 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-219ENST00000534049 LOC110117498A0A087WWA1 95 aa2.83□□□□□ -1.96
ITGB1-219ENST00000534049 TRAV21A0A0B4J279 112 aa2.83□□□□□ -1.96
ITGB1-219ENST00000534049 A0A0J9YXV3 536 aa2.83□□□□□ -1.96
ITGB1-219ENST00000534049 TRBV6-5A0A0K0K1A5 114 aa2.83□□□□□ -1.96
ITGB1-219ENST00000534049 H3BRN7 92 aa2.83□□□□□ -1.96
ITGB1-219ENST00000534049 BPY2O14599 106 aa2.83□□□□□ -1.96
ITGB1-219ENST00000534049 NDUFA1O15239 70 aa2.83□□□□□ -1.96
ITGB1-219ENST00000534049 IGKV3-11P04433 115 aa2.83□□□□□ -1.96
ITGB1-219ENST00000534049 CTSGP08311 255 aa2.83□□□□□ -1.96
ITGB1-219ENST00000534049 NNATQ16517 81 aa2.83□□□□□ -1.96
ITGB1-219ENST00000534049 DEFB114Q30KQ6 69 aa2.83□□□□□ -1.96
ITGB1-219ENST00000534049 CASC2Q6XLA1 102 aa2.83□□□□□ -1.96
ITGB1-219ENST00000534049 C1orf64Q8NEQ6 169 aa2.83□□□□□ -1.96
ITGB1-219ENST00000534049 TMEM167AQ8TBQ9 72 aa2.83□□□□□ -1.96
ITGB1-219ENST00000534049 LINC00308Q8TCZ7 52 aa2.83□□□□□ -1.96
ITGB1-219ENST00000534049 KRTAP4-3Q9BYR4 195 aa2.83□□□□□ -1.96
ITGB1-219ENST00000534049 CDC42SE2Q9NRR3 84 aa2.83□□□□□ -1.96
ITGB1-219ENST00000534049 TANC2Q9HCD6 1990 aa2.83□□□□□ -1.96
ITGB1-219ENST00000534049 FLNAP21333 2647 aaKnown RBP2.83□□□□□ -1.96
ITGB1-219ENST00000534049 ITPR3Q14573 2671 aa2.83□□□□□ -1.96
ITGB1-219ENST00000534049 TRAV10A0A0B4J240 114 aa2.82□□□□□ -1.96
ITGB1-219ENST00000534049 LCE6AA0A183 80 aa2.82□□□□□ -1.96
ITGB1-219ENST00000534049 PINLYPA6NC86 204 aa2.82□□□□□ -1.96
ITGB1-219ENST00000534049 A6NED7 52 aa2.82□□□□□ -1.96
ITGB1-219ENST00000534049 LY6HO94772 140 aa2.82□□□□□ -1.96
ITGB1-219ENST00000534049 LY6G6DO95868 133 aa2.82□□□□□ -1.96
ITGB1-219ENST00000534049 CRPP02741 224 aa2.82□□□□□ -1.96
ITGB1-219ENST00000534049 IGKV1-16P04430 117 aa2.82□□□□□ -1.96
ITGB1-219ENST00000534049 ZNF32P17041 273 aa2.82□□□□□ -1.96
ITGB1-219ENST00000534049 POLR2KP53803 58 aaKnown RBP2.82□□□□□ -1.96
ITGB1-219ENST00000534049 ZNF625Q96I27 306 aaPredicted RBP2.82□□□□□ -1.96
ITGB1-219ENST00000534049 Q9BRP9 147 aa2.82□□□□□ -1.96
ITGB1-219ENST00000534049 XAGE1AQ9HD64 81 aa2.82□□□□□ -1.96
ITGB1-219ENST00000534049 HEATR5BQ9P2D3 2071 aa2.81□□□□□ -1.96
ITGB1-219ENST00000534049 FREM3P0C091 2139 aa2.81□□□□□ -1.96
ITGB1-219ENST00000534049 HEATR1Q9H583 2144 aaKnown RBP2.81□□□□□ -1.96
ITGB1-219ENST00000534049 CACNA1DQ01668 2161 aa2.81□□□□□ -1.96
ITGB1-219ENST00000534049 PCNX1Q96RV3 2341 aa2.81□□□□□ -1.96
ITGB1-219ENST00000534049 ACANP16112 2415 aa2.81□□□□□ -1.96
ITGB1-219ENST00000534049 FBN3Q75N90 2809 aa2.81□□□□□ -1.96
ITGB1-219ENST00000534049 RPL37AP8A6NKH3 93 aa2.81□□□□□ -1.96
ITGB1-219ENST00000534049 C11orf71Q6IPW1 123 aa2.81□□□□□ -1.96
ITGB1-219ENST00000534049 MIR7-3HGQ8N6C7 128 aa2.81□□□□□ -1.96
ITGB1-219ENST00000534049 SPANXA2-OT1Q8N9U9 137 aa2.81□□□□□ -1.96
ITGB1-219ENST00000534049 FAM215AQ9Y5M1 114 aa2.81□□□□□ -1.96
ITGB1-219ENST00000534049 EML6Q6ZMW3 1958 aa2.81□□□□□ -1.96
ITGB1-219ENST00000534049 ZGRF1Q86YA3 2104 aa2.81□□□□□ -1.96
ITGB1-219ENST00000534049 AKAP6Q13023 2319 aa2.81□□□□□ -1.96
ITGB1-219ENST00000534049 FN1P02751 2386 aaKnown RBP2.81□□□□□ -1.96
ITGB1-219ENST00000534049 CUBNO60494 3623 aa2.81□□□□□ -1.96
ITGB1-219ENST00000534049 MPDZO75970 2070 aa2.8□□□□□ -1.96
ITGB1-219ENST00000534049 IGHV7-4-1A0A0J9YVY3 117 aa2.8□□□□□ -1.96
ITGB1-219ENST00000534049 RTL8CO15255 209 aa2.8□□□□□ -1.96
ITGB1-219ENST00000534049 CCL3P10147 92 aa2.8□□□□□ -1.96
ITGB1-219ENST00000534049 RETNLBQ9BQ08 111 aa2.8□□□□□ -1.96
ITGB1-219ENST00000534049 LINC00467Q9BRT7 94 aa2.8□□□□□ -1.96
ITGB1-219ENST00000534049 TTTY12Q9BZ98 90 aa2.8□□□□□ -1.96
ITGB1-219ENST00000534049 FGF23Q9GZV9 251 aaPredicted RBP2.8□□□□□ -1.96
ITGB1-219ENST00000534049 ZNF706Q9Y5V0 76 aaPredicted RBP2.8□□□□□ -1.96
ITGB1-219ENST00000534049 ZANQ9Y493 2812 aa2.8□□□□□ -1.96
ITGB1-219ENST00000534049 STAB1Q9NY15 2570 aa2.8□□□□□ -1.96
ITGB1-219ENST00000534049 SVEP1Q4LDE5 3571 aa2.79□□□□□ -1.96
ITGB1-219ENST00000534049 IGLV3-9A0A075B6K5 115 aa2.79□□□□□ -1.96
ITGB1-219ENST00000534049 FAM168BA1KXE4 195 aa2.79□□□□□ -1.96
ITGB1-219ENST00000534049 HAMPP81172 84 aa2.79□□□□□ -1.96
ITGB1-219ENST00000534049 MOBPQ13875 183 aa2.79□□□□□ -1.96
ITGB1-219ENST00000534049 DYSFO75923 2080 aa2.79□□□□□ -1.96
ITGB1-219ENST00000534049 MYO7BQ6PIF6 2116 aa2.78□□□□□ -1.96
ITGB1-219ENST00000534049 TLN2Q9Y4G6 2542 aa2.78□□□□□ -1.96
ITGB1-219ENST00000534049 IGHV1OR15-1A0A075B7D0 117 aa2.78□□□□□ -1.96
ITGB1-219ENST00000534049 TRBV10-1A0A0K0K1A3 114 aa2.78□□□□□ -1.96
ITGB1-219ENST00000534049 H3BPC8 53 aa2.78□□□□□ -1.96
ITGB1-219ENST00000534049 NCR3O14931 201 aa2.78□□□□□ -1.96
ITGB1-219ENST00000534049 KRTAP21-3Q3LHN1 58 aa2.78□□□□□ -1.96
ITGB1-219ENST00000534049 Q6ZQT0 140 aa2.78□□□□□ -1.96
ITGB1-219ENST00000534049 C20orf203Q8NBC4 194 aa2.78□□□□□ -1.96
ITGB1-219ENST00000534049 WFDC9Q8NEX5 89 aa2.78□□□□□ -1.96
ITGB1-219ENST00000534049 PRR15LQ9BU68 103 aa2.78□□□□□ -1.96
ITGB1-219ENST00000534049 DEFB126Q9BYW3 111 aa2.78□□□□□ -1.96
ITGB1-219ENST00000534049 LINC00574Q9H8X3 128 aa2.78□□□□□ -1.96
ITGB1-219ENST00000534049 ZNF702PQ9H963 129 aa2.78□□□□□ -1.96
ITGB1-219ENST00000534049 DNAJC13O75165 2243 aa2.78□□□□□ -1.96
ITGB1-219ENST00000534049 ZNF407Q9C0G0 2248 aa2.78□□□□□ -1.96
ITGB1-219ENST00000534049 MAP1AP78559 2803 aaPredicted RBP2.78□□□□□ -1.97
ITGB1-219ENST00000534049 NIPBLQ6KC79 2804 aaeCLIP2.78□□□□□ -1.97
ITGB1-219ENST00000534049 ABCA4P78363 2273 aa2.77□□□□□ -1.97
ITGB1-219ENST00000534049 ATRQ13535 2644 aa2.77□□□□□ -1.97
ITGB1-219ENST00000534049 INTS1Q8N201 2190 aaKnown RBP2.77□□□□□ -1.97
ITGB1-219ENST00000534049 JMJD1CQ15652 2540 aa2.77□□□□□ -1.97
ITGB1-219ENST00000534049 LECT2O14960 151 aa2.77□□□□□ -1.97
ITGB1-219ENST00000534049 KRTAP10-8P60410 259 aa2.77□□□□□ -1.97
ITGB1-219ENST00000534049 WT1-ASQ06250 92 aa2.77□□□□□ -1.97
ITGB1-219ENST00000534049 RPL39P5Q59GN2 51 aa2.77□□□□□ -1.97
ITGB1-219ENST00000534049 HCP5Q6MZN7 132 aa2.77□□□□□ -1.97
ITGB1-219ENST00000534049 ZCCHC13Q8WW36 166 aaKnown RBP2.77□□□□□ -1.97
ITGB1-219ENST00000534049 B9D2Q9BPU9 175 aa2.77□□□□□ -1.97
ITGB1-219ENST00000534049 KLK9Q9UKQ9 250 aa2.77□□□□□ -1.97
ITGB1-219ENST00000534049 IGHV3OR16-13A0A075B7E8 117 aa2.76□□□□□ -1.97
ITGB1-219ENST00000534049 IGHV3-43A0A0B4J1X8 118 aa2.76□□□□□ -1.97
ITGB1-219ENST00000534049 DEFB108AA8MXU0 73 aa2.76□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 87.9 ms