RNA–Protein interactions for RNA: ENST00000524596.1

LIN7C-202, Transcript of lin-7 homolog C, crumbs cell polarity complex component, humanhuman

TSL 1 (best) BASIC

Gene LIN7C, Length 4,290 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN7C-202ENST00000524596 CREBBPQ92793 2442 aa4.55□□□□□ -1.68
LIN7C-202ENST00000524596 C7orf33Q8WU49 177 aa4.55□□□□□ -1.68
LIN7C-202ENST00000524596 GVINP1Q7Z2Y8 2422 aa4.54□□□□□ -1.68
LIN7C-202ENST00000524596 ZCCHC13Q8WW36 166 aaKnown RBP4.54□□□□□ -1.68
LIN7C-202ENST00000524596 K7EQZ3 153 aa4.54□□□□□ -1.68
LIN7C-202ENST00000524596 CACNA1HO95180 2353 aa4.54□□□□□ -1.68
LIN7C-202ENST00000524596 LINC00959A0A1B0GUT2 108 aa4.53□□□□□ -1.68
LIN7C-202ENST00000524596 C9orf163Q8N9P6 203 aa4.53□□□□□ -1.68
LIN7C-202ENST00000524596 CNBPP62633 177 aaKnown RBP4.53□□□□□ -1.68
LIN7C-202ENST00000524596 RAI1Q7Z5J4 1906 aaPredicted RBP4.53□□□□□ -1.68
LIN7C-202ENST00000524596 CACNA1GO43497 2377 aa4.52□□□□□ -1.69
LIN7C-202ENST00000524596 SPTA1P02549 2419 aa4.52□□□□□ -1.69
LIN7C-202ENST00000524596 RTL8CO15255 209 aa4.52□□□□□ -1.69
LIN7C-202ENST00000524596 ANGP03950 147 aaKnown RBP4.52□□□□□ -1.69
LIN7C-202ENST00000524596 FLVCR1-AS1Q8TAF5 88 aa4.52□□□□□ -1.69
LIN7C-202ENST00000524596 C1orf229Q6ZS94 237 aaPredicted RBP4.52□□□□□ -1.69
LIN7C-202ENST00000524596 EGFEM1PQ0D2K5 195 aa4.52□□□□□ -1.69
LIN7C-202ENST00000524596 MAP1BP46821 2468 aaKnown RBP4.51□□□□□ -1.69
LIN7C-202ENST00000524596 A0A087WSZ3 146 aa4.51□□□□□ -1.69
LIN7C-202ENST00000524596 ODF3BA8MYP8 253 aa4.51□□□□□ -1.69
LIN7C-202ENST00000524596 CASC10Q5T4H9 136 aa4.51□□□□□ -1.69
LIN7C-202ENST00000524596 Q8NDZ9 215 aa4.51□□□□□ -1.69
LIN7C-202ENST00000524596 PCNTO95613 3336 aa4.5□□□□□ -1.69
LIN7C-202ENST00000524596 CCL14Q16627 93 aa4.5□□□□□ -1.69
LIN7C-202ENST00000524596 OTOGLQ3ZCN5 2332 aa4.5□□□□□ -1.69
LIN7C-202ENST00000524596 PRR9Q5T870 116 aa4.5□□□□□ -1.69
LIN7C-202ENST00000524596 FAM104AQ969W3 186 aa4.5□□□□□ -1.69
LIN7C-202ENST00000524596 CCL19Q99731 98 aa4.5□□□□□ -1.69
LIN7C-202ENST00000524596 CR1P17927 2039 aa4.5□□□□□ -1.69
LIN7C-202ENST00000524596 IGKV2D-24A0A075B6R9 120 aa4.49□□□□□ -1.69
LIN7C-202ENST00000524596 LTBP2Q14767 1821 aa4.49□□□□□ -1.69
LIN7C-202ENST00000524596 ACACAQ13085 2346 aa4.49□□□□□ -1.69
LIN7C-202ENST00000524596 LINC00315P59091 139 aa4.49□□□□□ -1.69
LIN7C-202ENST00000524596 CLPSL2Q6UWE3 100 aa4.49□□□□□ -1.69
LIN7C-202ENST00000524596 LCE6AA0A183 80 aa4.48□□□□□ -1.69
LIN7C-202ENST00000524596 PLXNB2O15031 1838 aa4.48□□□□□ -1.69
LIN7C-202ENST00000524596 M0R2N4 97 aa4.48□□□□□ -1.69
LIN7C-202ENST00000524596 A8MTW9 85 aa4.47□□□□□ -1.69
LIN7C-202ENST00000524596 LINC01565O15544 149 aa4.47□□□□□ -1.69
LIN7C-202ENST00000524596 NOTCH3Q9UM47 2321 aa4.47□□□□□ -1.69
LIN7C-202ENST00000524596 DEFB131AP59861 70 aa4.47□□□□□ -1.69
LIN7C-202ENST00000524596 MRGPRG-AS1Q2M3A8 158 aa4.45□□□□□ -1.7
LIN7C-202ENST00000524596 COL4A3Q01955 1670 aa4.45□□□□□ -1.7
LIN7C-202ENST00000524596 A0A1B0GVX0 72 aa4.44□□□□□ -1.7
LIN7C-202ENST00000524596 SPINK14Q6IE38 97 aa4.44□□□□□ -1.7
LIN7C-202ENST00000524596 A0A1W2PNU3 283 aaPredicted RBP4.44□□□□□ -1.7
LIN7C-202ENST00000524596 C2CD3Q4AC94 2353 aa4.44□□□□□ -1.7
LIN7C-202ENST00000524596 HRES1P13985 223 aa4.43□□□□□ -1.7
LIN7C-202ENST00000524596 TCF20Q9UGU0 1960 aaKnown RBP4.43□□□□□ -1.7
LIN7C-202ENST00000524596 A8MUU9 505 aa4.43□□□□□ -1.7
LIN7C-202ENST00000524596 PRLHP81277 87 aa4.43□□□□□ -1.7
LIN7C-202ENST00000524596 H3BUA1 57 aa4.42□□□□□ -1.7
LIN7C-202ENST00000524596 SPINK1P00995 79 aa4.42□□□□□ -1.7
LIN7C-202ENST00000524596 PROK1P58294 105 aa4.42□□□□□ -1.7
LIN7C-202ENST00000524596 ZNF575Q86XF7 245 aa4.42□□□□□ -1.7
LIN7C-202ENST00000524596 DEFB119Q8N690 84 aa4.41□□□□□ -1.7
LIN7C-202ENST00000524596 DEFB1P60022 68 aa4.41□□□□□ -1.7
LIN7C-202ENST00000524596 NBASA2RRP1 2371 aa4.4□□□□□ -1.7
LIN7C-202ENST00000524596 FLG2Q5D862 2391 aaPredicted RBP4.4□□□□□ -1.7
LIN7C-202ENST00000524596 IGLV6-57P01721 117 aa4.4□□□□□ -1.71
LIN7C-202ENST00000524596 SLURP1P55000 103 aa4.4□□□□□ -1.71
LIN7C-202ENST00000524596 G3V318 75 aa4.39□□□□□ -1.71
LIN7C-202ENST00000524596 Q5W150 140 aa4.39□□□□□ -1.71
LIN7C-202ENST00000524596 ZNF861PO60384 105 aa4.39□□□□□ -1.71
LIN7C-202ENST00000524596 SPRR4Q96PI1 79 aa4.39□□□□□ -1.71
LIN7C-202ENST00000524596 ANKRD17O75179 2603 aaKnown RBP4.38□□□□□ -1.71
LIN7C-202ENST00000524596 NOP10Q9NPE3 64 aaKnown RBP4.38□□□□□ -1.71
LIN7C-202ENST00000524596 DSCR10P59022 87 aa4.38□□□□□ -1.71
LIN7C-202ENST00000524596 DEFB130BP0DP73 79 aa4.38□□□□□ -1.71
LIN7C-202ENST00000524596 DEFB130AP0DP74 79 aa4.38□□□□□ -1.71
LIN7C-202ENST00000524596 UBE2DNLQ8IWF7 75 aa4.38□□□□□ -1.71
LIN7C-202ENST00000524596 EP300Q09472 2414 aaPredicted RBP4.37□□□□□ -1.71
LIN7C-202ENST00000524596 Q6YL49 198 aa4.37□□□□□ -1.71
LIN7C-202ENST00000524596 UNQ6190/PRO20217Q6UXQ8 127 aa4.36□□□□□ -1.71
LIN7C-202ENST00000524596 MRPL34Q9BQ48 92 aaKnown RBP4.36□□□□□ -1.71
LIN7C-202ENST00000524596 ROS1P08922 2347 aa4.36□□□□□ -1.71
LIN7C-202ENST00000524596 IGLV1-40P01703 118 aa4.36□□□□□ -1.71
LIN7C-202ENST00000524596 IGKV2-24A0A0C4DH68 120 aa4.35□□□□□ -1.71
LIN7C-202ENST00000524596 IGLV5-48A0A075B6I7 105 aa4.35□□□□□ -1.71
LIN7C-202ENST00000524596 LINC00612Q8N6U2 182 aa4.35□□□□□ -1.71
LIN7C-202ENST00000524596 LY6EQ16553 131 aa4.35□□□□□ -1.71
LIN7C-202ENST00000524596 LY6G6CO95867 125 aa4.33□□□□□ -1.72
LIN7C-202ENST00000524596 HTN3P15516 51 aa4.33□□□□□ -1.72
LIN7C-202ENST00000524596 SPTAN1Q13813 2472 aaKnown RBP4.32□□□□□ -1.72
LIN7C-202ENST00000524596 A0A096LNT2 108 aa4.32□□□□□ -1.72
LIN7C-202ENST00000524596 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.32□□□□□ -1.72
LIN7C-202ENST00000524596 PCNX1Q96RV3 2341 aa4.32□□□□□ -1.72
LIN7C-202ENST00000524596 A0A1B0GU33 70 aa4.32□□□□□ -1.72
LIN7C-202ENST00000524596 KRTAP23-1A1A580 65 aa4.32□□□□□ -1.72
LIN7C-202ENST00000524596 Q6ZRX8 168 aa4.32□□□□□ -1.72
LIN7C-202ENST00000524596 PIEZO1Q92508 2521 aa4.31□□□□□ -1.72
LIN7C-202ENST00000524596 A0A1B0GUV1 79 aa4.31□□□□□ -1.72
LIN7C-202ENST00000524596 PLAC8Q9NZF1 115 aa4.31□□□□□ -1.72
LIN7C-202ENST00000524596 HTTP42858 3142 aa4.31□□□□□ -1.72
LIN7C-202ENST00000524596 CACNA1AO00555 2505 aa4.31□□□□□ -1.72
LIN7C-202ENST00000524596 A0A096LNI7 61 aa4.31□□□□□ -1.72
LIN7C-202ENST00000524596 A0A1W2PNN7 141 aa4.31□□□□□ -1.72
LIN7C-202ENST00000524596 GPR179Q6PRD1 2367 aa4.31□□□□□ -1.72
LIN7C-202ENST00000524596 BRD3OSQ6XYD6 125 aa4.3□□□□□ -1.72
LIN7C-202ENST00000524596 PRO0255Q9UI72 69 aa4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 100.8 ms