RNA–Protein interactions for RNA: ENST00000518040.5

SH2D4A-202, Transcript of SH2 domain containing 4A, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SH2D4A, Length 1,697 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D4A-202ENST00000518040 C6orf48Q9UBA6 75 aa5.67□□□□□ -1.5
SH2D4A-202ENST00000518040 FP248Q71RG6 208 aaPredicted RBP5.66□□□□□ -1.5
SH2D4A-202ENST00000518040 FAM19A2Q8N3H0 131 aa5.66□□□□□ -1.5
SH2D4A-202ENST00000518040 TRBV30A0A0K0K1B3 111 aa5.66□□□□□ -1.5
SH2D4A-202ENST00000518040 NDUFC2-KCTD14E9PQ53 114 aa5.66□□□□□ -1.5
SH2D4A-202ENST00000518040 RPL39P62891 51 aaKnown RBP5.66□□□□□ -1.5
SH2D4A-202ENST00000518040 C10orf25Q5T742 122 aa5.66□□□□□ -1.5
SH2D4A-202ENST00000518040 KRTAP5-3Q6L8H2 238 aa5.66□□□□□ -1.5
SH2D4A-202ENST00000518040 UNQ6190/PRO20217Q6UXQ8 127 aa5.66□□□□□ -1.5
SH2D4A-202ENST00000518040 TOMM6Q96B49 74 aa5.66□□□□□ -1.5
SH2D4A-202ENST00000518040 A0A096LNJ9 63 aa5.65□□□□□ -1.51
SH2D4A-202ENST00000518040 S100A2P29034 98 aa5.65□□□□□ -1.51
SH2D4A-202ENST00000518040 PDZD11Q5EBL8 140 aa5.65□□□□□ -1.51
SH2D4A-202ENST00000518040 SPANXA1Q9NS26 97 aa5.65□□□□□ -1.51
SH2D4A-202ENST00000518040 IGKV2D-26A0A0A0MRZ7 120 aa5.64□□□□□ -1.51
SH2D4A-202ENST00000518040 BCE1O60756 84 aa5.64□□□□□ -1.51
SH2D4A-202ENST00000518040 LEPROTL1O95214 131 aa5.64□□□□□ -1.51
SH2D4A-202ENST00000518040 KRTAP13-2Q52LG2 175 aa5.64□□□□□ -1.51
SH2D4A-202ENST00000518040 SCGB3A1Q96QR1 104 aa5.64□□□□□ -1.51
SH2D4A-202ENST00000518040 TIMM21Q9BVV7 248 aa5.64□□□□□ -1.51
SH2D4A-202ENST00000518040 UBE2D4Q9Y2X8 147 aa5.64□□□□□ -1.51
SH2D4A-202ENST00000518040 CHTOPQ9Y3Y2 248 aaKnown RBP5.64□□□□□ -1.51
SH2D4A-202ENST00000518040 IGHV3OR16-9A0A0B4J2B5 98 aa5.63□□□□□ -1.51
SH2D4A-202ENST00000518040 ATP5LO75964 103 aa5.63□□□□□ -1.51
SH2D4A-202ENST00000518040 C9orf129Q5T035 196 aaKnown RBP5.63□□□□□ -1.51
SH2D4A-202ENST00000518040 LINC00242Q5T6M2 205 aa5.63□□□□□ -1.51
SH2D4A-202ENST00000518040 ERASQ7Z444 233 aa5.63□□□□□ -1.51
SH2D4A-202ENST00000518040 HIST3H2BBQ8N257 126 aa5.63□□□□□ -1.51
SH2D4A-202ENST00000518040 TIMM17AQ99595 171 aa5.63□□□□□ -1.51
SH2D4A-202ENST00000518040 HSPB8Q9UJY1 196 aa5.63□□□□□ -1.51
SH2D4A-202ENST00000518040 PYGO1Q9Y3Y4 419 aa5.63□□□□□ -1.51
SH2D4A-202ENST00000518040 NPSP0C0P6 89 aa5.63□□□□□ -1.51
SH2D4A-202ENST00000518040 FABP4P15090 132 aa5.63□□□□□ -1.51
SH2D4A-202ENST00000518040 RNASE13Q5GAN3 156 aaKnown RBP5.63□□□□□ -1.51
SH2D4A-202ENST00000518040 PAPPA-AS1Q5QFB9 102 aa5.63□□□□□ -1.51
SH2D4A-202ENST00000518040 Q6ZN92 141 aa5.63□□□□□ -1.51
SH2D4A-202ENST00000518040 TMEM141Q96I45 108 aa5.63□□□□□ -1.51
SH2D4A-202ENST00000518040 PACRGQ96M98 296 aaPredicted RBP5.63□□□□□ -1.51
SH2D4A-202ENST00000518040 C22orf24Q9Y442 160 aa5.63□□□□□ -1.51
SH2D4A-202ENST00000518040 C9orf118A6NHY6 69 aa5.62□□□□□ -1.51
SH2D4A-202ENST00000518040 IGIPA6NJ69 53 aa5.62□□□□□ -1.51
SH2D4A-202ENST00000518040 PCP4P48539 62 aa5.62□□□□□ -1.51
SH2D4A-202ENST00000518040 SPAG11AQ6PDA7 123 aa5.62□□□□□ -1.51
SH2D4A-202ENST00000518040 IFI27L1Q96BM0 104 aa5.62□□□□□ -1.51
SH2D4A-202ENST00000518040 TP73-AS1Q9UF72 201 aa5.62□□□□□ -1.51
SH2D4A-202ENST00000518040 IGLV4-3A0A075B6K6 122 aa5.61□□□□□ -1.51
SH2D4A-202ENST00000518040 MRPS36P82909 103 aaKnown RBP5.61□□□□□ -1.51
SH2D4A-202ENST00000518040 Q6ZUT4 128 aa5.61□□□□□ -1.51
SH2D4A-202ENST00000518040 HIST1H2BLQ99880 126 aa5.61□□□□□ -1.51
SH2D4A-202ENST00000518040 KRTAP4-1Q9BYQ7 146 aa5.61□□□□□ -1.51
SH2D4A-202ENST00000518040 ANAPC11Q9NYG5 84 aa5.61□□□□□ -1.51
SH2D4A-202ENST00000518040 KRTAP13-3Q3SY46 172 aa5.6□□□□□ -1.51
SH2D4A-202ENST00000518040 TEX43Q6ZNM6 134 aa5.6□□□□□ -1.51
SH2D4A-202ENST00000518040 C2orf88Q9BSF0 95 aa5.6□□□□□ -1.51
SH2D4A-202ENST00000518040 MAP1LC3CQ9BXW4 147 aa5.6□□□□□ -1.51
SH2D4A-202ENST00000518040 VCX2Q9H322 139 aa5.6□□□□□ -1.51
SH2D4A-202ENST00000518040 MRPL55Q7Z7F7 128 aaKnown RBP5.59□□□□□ -1.51
SH2D4A-202ENST00000518040 H0Y8G0 127 aa5.59□□□□□ -1.52
SH2D4A-202ENST00000518040 KIAA0087Q14695 138 aa5.59□□□□□ -1.52
SH2D4A-202ENST00000518040 PMVKQ15126 192 aa5.59□□□□□ -1.52
SH2D4A-202ENST00000518040 IFITM10A6NMD0 228 aa5.58□□□□□ -1.52
SH2D4A-202ENST00000518040 TSTD3H0UI37 97 aa5.58□□□□□ -1.52
SH2D4A-202ENST00000518040 KRTDAPP60985 99 aa5.58□□□□□ -1.52
SH2D4A-202ENST00000518040 FAM104AQ969W3 186 aa5.58□□□□□ -1.52
SH2D4A-202ENST00000518040 AMELXQ99217 191 aa5.58□□□□□ -1.52
SH2D4A-202ENST00000518040 TRAV12-1A0A0B4J245 112 aa5.57□□□□□ -1.52
SH2D4A-202ENST00000518040 SYS1-DBNDD2H3BUS1 97 aa5.57□□□□□ -1.52
SH2D4A-202ENST00000518040 UBE2AP49459 152 aa5.57□□□□□ -1.52
SH2D4A-202ENST00000518040 MT1HP80294 61 aa5.57□□□□□ -1.52
SH2D4A-202ENST00000518040 PYY3Q5JQD4 70 aa5.57□□□□□ -1.52
SH2D4A-202ENST00000518040 CST9LQ9H4G1 147 aa5.57□□□□□ -1.52
SH2D4A-202ENST00000518040 C20orf202A1L168 122 aa5.56□□□□□ -1.52
SH2D4A-202ENST00000518040 C3orf79P0CE67 100 aa5.56□□□□□ -1.52
SH2D4A-202ENST00000518040 ZC2HC1BQ5TFG8 222 aa5.56□□□□□ -1.52
SH2D4A-202ENST00000518040 SEC11AP67812 179 aa5.56□□□□□ -1.52
SH2D4A-202ENST00000518040 PET117Q6UWS5 81 aa5.56□□□□□ -1.52
SH2D4A-202ENST00000518040 C2orf82Q6UX34 121 aa5.56□□□□□ -1.52
SH2D4A-202ENST00000518040 KRTAP13-1Q8IUC0 172 aa5.56□□□□□ -1.52
SH2D4A-202ENST00000518040 F8VRH5 84 aa5.55□□□□□ -1.52
SH2D4A-202ENST00000518040 DDTP30046 118 aa5.55□□□□□ -1.52
SH2D4A-202ENST00000518040 LINC01561Q8N1V8 128 aa5.55□□□□□ -1.52
SH2D4A-202ENST00000518040 C14orf144Q96I85 54 aa5.55□□□□□ -1.52
SH2D4A-202ENST00000518040 GEMIN7Q9H840 131 aaKnown RBP5.55□□□□□ -1.52
SH2D4A-202ENST00000518040 HSBP1L1C9JCN9 74 aa5.54□□□□□ -1.52
SH2D4A-202ENST00000518040 HERVK_113P63121 156 aa5.54□□□□□ -1.52
SH2D4A-202ENST00000518040 XAGE1AQ9HD64 81 aa5.54□□□□□ -1.52
SH2D4A-202ENST00000518040 TINCRA0A1B0GVN0 87 aa5.53□□□□□ -1.52
SH2D4A-202ENST00000518040 PRSS2P07478 247 aa5.53□□□□□ -1.52
SH2D4A-202ENST00000518040 IGLC3P0DOY3 106 aa5.53□□□□□ -1.52
SH2D4A-202ENST00000518040 PLNP26678 52 aa5.53□□□□□ -1.52
SH2D4A-202ENST00000518040 KRTAP10-6P60371 365 aaPredicted RBP5.53□□□□□ -1.52
SH2D4A-202ENST00000518040 CKS1BP61024 79 aa5.53□□□□□ -1.52
SH2D4A-202ENST00000518040 LINC01545Q5VT33 79 aa5.53□□□□□ -1.52
SH2D4A-202ENST00000518040 FAM19A3Q7Z5A8 133 aa5.53□□□□□ -1.52
SH2D4A-202ENST00000518040 LINC00167Q96N53 147 aa5.53□□□□□ -1.52
SH2D4A-202ENST00000518040 NDUFA12Q9UI09 145 aa5.53□□□□□ -1.52
SH2D4A-202ENST00000518040 RPL37AP8A6NKH3 93 aa5.53□□□□□ -1.52
SH2D4A-202ENST00000518040 DPM2O94777 84 aa5.53□□□□□ -1.52
SH2D4A-202ENST00000518040 SCGB1D1O95968 90 aa5.53□□□□□ -1.52
SH2D4A-202ENST00000518040 IGKCP01834 107 aa5.53□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms