RNA–Protein interactions for RNA: ENST00000517097.1

SCARNA3-201, small Cajal body-specific RNA 3, humanhuman

BASIC

Gene SCARNA3, Length 143 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA3-201ENST00000517097 PRO0255Q9UI72 69 aa0.69□□□□□ -2.3
SCARNA3-201ENST00000517097 DDX60LQ5H9U9 1706 aaKnown RBP0.69□□□□□ -2.3
SCARNA3-201ENST00000517097 RICTORQ6R327 1708 aa0.69□□□□□ -2.3
SCARNA3-201ENST00000517097 PTPRZ1P23471 2315 aaPredicted RBP0.69□□□□□ -2.3
SCARNA3-201ENST00000517097 PTPRQQ9UMZ3 2332 aa0.69□□□□□ -2.3
SCARNA3-201ENST00000517097 PRB3Q04118 309 aaPredicted RBP0.68□□□□□ -2.3
SCARNA3-201ENST00000517097 PIGYQ3MUY2 71 aa0.68□□□□□ -2.3
SCARNA3-201ENST00000517097 NRAPQ86VF7 1730 aa0.68□□□□□ -2.3
SCARNA3-201ENST00000517097 USP32Q8NFA0 1604 aa0.67□□□□□ -2.3
SCARNA3-201ENST00000517097 TNCP24821 2201 aa0.67□□□□□ -2.3
SCARNA3-201ENST00000517097 SMIM13P0DJ93 91 aa0.67□□□□□ -2.3
SCARNA3-201ENST00000517097 DEFA5Q01523 94 aa0.67□□□□□ -2.3
SCARNA3-201ENST00000517097 TJP1Q07157 1748 aa0.67□□□□□ -2.3
SCARNA3-201ENST00000517097 PREX1Q8TCU6 1659 aa0.66□□□□□ -2.3
SCARNA3-201ENST00000517097 ZFHX3Q15911 3703 aa0.66□□□□□ -2.3
SCARNA3-201ENST00000517097 TRAV21A0A0B4J279 112 aa0.66□□□□□ -2.3
SCARNA3-201ENST00000517097 PDCD5O14737 125 aa0.66□□□□□ -2.3
SCARNA3-201ENST00000517097 ATP5EP2Q5VTU8 51 aa0.66□□□□□ -2.3
SCARNA3-201ENST00000517097 DEFB123Q8N688 67 aa0.66□□□□□ -2.3
SCARNA3-201ENST00000517097 CRCT1Q9UGL9 99 aa0.66□□□□□ -2.3
SCARNA3-201ENST00000517097 NESP48681 1621 aa0.66□□□□□ -2.3
SCARNA3-201ENST00000517097 ABCA9Q8IUA7 1624 aa0.66□□□□□ -2.3
SCARNA3-201ENST00000517097 EIF2AK4Q9P2K8 1649 aaKnown RBP0.66□□□□□ -2.3
SCARNA3-201ENST00000517097 F8P00451 2351 aa0.65□□□□□ -2.3
SCARNA3-201ENST00000517097 CLIP1P30622 1438 aa0.65□□□□□ -2.3
SCARNA3-201ENST00000517097 MADDQ8WXG6 1647 aa0.65□□□□□ -2.31
SCARNA3-201ENST00000517097 FXYD6-FXYD2A0A087WZ82 144 aa0.65□□□□□ -2.31
SCARNA3-201ENST00000517097 Q8IZM0 81 aa0.65□□□□□ -2.31
SCARNA3-201ENST00000517097 WFDC9Q8NEX5 89 aa0.65□□□□□ -2.31
SCARNA3-201ENST00000517097 GAFA1Q96PS6 74 aa0.65□□□□□ -2.31
SCARNA3-201ENST00000517097 TTC28Q96AY4 2481 aa0.65□□□□□ -2.31
SCARNA3-201ENST00000517097 CACNA1EQ15878 2313 aa0.65□□□□□ -2.31
SCARNA3-201ENST00000517097 TNRC6CQ9HCJ0 1690 aaKnown RBP0.65□□□□□ -2.31
SCARNA3-201ENST00000517097 ERICH3Q5RHP9 1530 aa0.64□□□□□ -2.31
SCARNA3-201ENST00000517097 ANKRD17O75179 2603 aaKnown RBP0.64□□□□□ -2.31
SCARNA3-201ENST00000517097 A0A087WXM4 84 aa0.64□□□□□ -2.31
SCARNA3-201ENST00000517097 K7EQZ3 153 aa0.64□□□□□ -2.31
SCARNA3-201ENST00000517097 NDUFB1O75438 58 aa0.64□□□□□ -2.31
SCARNA3-201ENST00000517097 COX7BP24311 80 aa0.64□□□□□ -2.31
SCARNA3-201ENST00000517097 KRTAP4-1Q9BYQ7 146 aa0.64□□□□□ -2.31
SCARNA3-201ENST00000517097 CD163L1Q9NR16 1453 aa0.64□□□□□ -2.31
SCARNA3-201ENST00000517097 INO80Q9ULG1 1556 aaPredicted RBP0.64□□□□□ -2.31
SCARNA3-201ENST00000517097 CCDC180Q9P1Z9 1646 aa0.64□□□□□ -2.31
SCARNA3-201ENST00000517097 DUOX2Q9NRD8 1548 aa0.64□□□□□ -2.31
SCARNA3-201ENST00000517097 SPTBN2O15020 2390 aa0.63□□□□□ -2.31
SCARNA3-201ENST00000517097 NHSQ6T4R5 1651 aa0.63□□□□□ -2.31
SCARNA3-201ENST00000517097 NWD1Q149M9 1564 aa0.63□□□□□ -2.31
SCARNA3-201ENST00000517097 UMAD1C9J7I0 102 aa0.63□□□□□ -2.31
SCARNA3-201ENST00000517097 IFI6P09912 130 aa0.63□□□□□ -2.31
SCARNA3-201ENST00000517097 IFI27P40305 119 aaPredicted RBP0.63□□□□□ -2.31
SCARNA3-201ENST00000517097 USMG5Q96IX5 58 aa0.63□□□□□ -2.31
SCARNA3-201ENST00000517097 CNOT1A5YKK6 2376 aaKnown RBP0.63□□□□□ -2.31
SCARNA3-201ENST00000517097 CDC42BPGQ6DT37 1551 aa0.62□□□□□ -2.31
SCARNA3-201ENST00000517097 C4AP0C0L4 1744 aa0.62□□□□□ -2.31
SCARNA3-201ENST00000517097 C4BP0C0L5 1744 aa0.62□□□□□ -2.31
SCARNA3-201ENST00000517097 Q5BKY6 102 aa0.62□□□□□ -2.31
SCARNA3-201ENST00000517097 CRIPTQ9P021 101 aa0.62□□□□□ -2.31
SCARNA3-201ENST00000517097 SPTY2D1-AS1A0A0U1RR47 76 aa0.61□□□□□ -2.31
SCARNA3-201ENST00000517097 COX6B1P14854 86 aa0.61□□□□□ -2.31
SCARNA3-201ENST00000517097 HEPN1Q6WQI6 88 aa0.61□□□□□ -2.31
SCARNA3-201ENST00000517097 FBN3Q75N90 2809 aa0.61□□□□□ -2.31
SCARNA3-201ENST00000517097 EFCAB5A4FU69 1503 aa0.6□□□□□ -2.31
SCARNA3-201ENST00000517097 LMTK2Q8IWU2 1503 aa0.6□□□□□ -2.31
SCARNA3-201ENST00000517097 ASXL1Q8IXJ9 1541 aa0.6□□□□□ -2.31
SCARNA3-201ENST00000517097 PKDREJQ9NTG1 2253 aa0.6□□□□□ -2.31
SCARNA3-201ENST00000517097 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP0.6□□□□□ -2.31
SCARNA3-201ENST00000517097 SPTBN1Q01082 2364 aaKnown RBP0.6□□□□□ -2.31
SCARNA3-201ENST00000517097 SMIM31A0A1B0GVY4 71 aa0.59□□□□□ -2.31
SCARNA3-201ENST00000517097 CPSF4LA6NMK7 179 aaKnown RBP0.59□□□□□ -2.31
SCARNA3-201ENST00000517097 I3L3M4 83 aa0.59□□□□□ -2.31
SCARNA3-201ENST00000517097 COX8AP10176 69 aa0.59□□□□□ -2.31
SCARNA3-201ENST00000517097 HMGA1P17096 107 aaKnown RBP0.59□□□□□ -2.31
SCARNA3-201ENST00000517097 NREPQ16612 68 aa0.59□□□□□ -2.31
SCARNA3-201ENST00000517097 Q5VSD8 79 aa0.59□□□□□ -2.31
SCARNA3-201ENST00000517097 KRTAP19-3Q7Z4W3 81 aa0.59□□□□□ -2.31
SCARNA3-201ENST00000517097 FBN2P35556 2912 aa0.59□□□□□ -2.32
SCARNA3-201ENST00000517097 NCOR1O75376 2440 aa0.58□□□□□ -2.32
SCARNA3-201ENST00000517097 MEGF8Q7Z7M0 2845 aa0.58□□□□□ -2.32
SCARNA3-201ENST00000517097 ANKRD50Q9ULJ7 1429 aa0.58□□□□□ -2.32
SCARNA3-201ENST00000517097 FCGBPQ9Y6R7 5405 aaPredicted RBP0.58□□□□□ -2.32
SCARNA3-201ENST00000517097 LCE6AA0A183 80 aa0.58□□□□□ -2.32
SCARNA3-201ENST00000517097 H3BVH4 76 aa0.58□□□□□ -2.32
SCARNA3-201ENST00000517097 SPRR1AP35321 89 aa0.58□□□□□ -2.32
SCARNA3-201ENST00000517097 RPL38P63173 70 aaKnown RBP0.58□□□□□ -2.32
SCARNA3-201ENST00000517097 DIP2AQ14689 1571 aa0.57□□□□□ -2.32
SCARNA3-201ENST00000517097 MRPL34Q9BQ48 92 aaKnown RBP0.57□□□□□ -2.32
SCARNA3-201ENST00000517097 HILPDAQ9Y5L2 63 aa0.57□□□□□ -2.32
SCARNA3-201ENST00000517097 CELSR2Q9HCU4 2923 aa0.57□□□□□ -2.32
SCARNA3-201ENST00000517097 RNF17Q9BXT8 1623 aaKnown RBP0.56□□□□□ -2.32
SCARNA3-201ENST00000517097 SPRR1BP22528 89 aa0.56□□□□□ -2.32
SCARNA3-201ENST00000517097 SPINK6Q6UWN8 80 aa0.56□□□□□ -2.32
SCARNA3-201ENST00000517097 POLQO75417 2590 aa0.56□□□□□ -2.32
SCARNA3-201ENST00000517097 ABCA12Q86UK0 2595 aa0.55□□□□□ -2.32
SCARNA3-201ENST00000517097 TIAM1Q13009 1591 aa0.55□□□□□ -2.32
SCARNA3-201ENST00000517097 NDUFA4O00483 81 aa0.55□□□□□ -2.32
SCARNA3-201ENST00000517097 KRTAP2-3P0C7H8 128 aa0.55□□□□□ -2.32
SCARNA3-201ENST00000517097 KRTAP2-4Q9BYR9 128 aa0.55□□□□□ -2.32
SCARNA3-201ENST00000517097 KRTAP2-1Q9BYU5 128 aa0.55□□□□□ -2.32
SCARNA3-201ENST00000517097 ABCA6Q8N139 1617 aa0.55□□□□□ -2.32
SCARNA3-201ENST00000517097 TPRP12270 2363 aaKnown RBP0.55□□□□□ -2.32
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms