RNA–Protein interactions for RNA: ENST00000514600.5

LINC00616-205, long intergenic non-protein coding RNA 616, humanhuman

TSL 1 (best) BASIC

Gene LINC00616, Length 2,017 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00616-205ENST00000514600 NREPQ16612 68 aa3.55□□□□□ -1.84
LINC00616-205ENST00000514600 ABRACLQ9P1F3 81 aa3.55□□□□□ -1.84
LINC00616-205ENST00000514600 SMG1Q96Q15 3661 aaKnown RBP3.55□□□□□ -1.84
LINC00616-205ENST00000514600 FREM1Q5H8C1 2179 aa3.55□□□□□ -1.84
LINC00616-205ENST00000514600 COL5A1P20908 1838 aaPredicted RBP3.55□□□□□ -1.84
LINC00616-205ENST00000514600 LAMA1P25391 3075 aa3.55□□□□□ -1.84
LINC00616-205ENST00000514600 KLK9Q9UKQ9 250 aa3.54□□□□□ -1.84
LINC00616-205ENST00000514600 GCN1Q92616 2671 aaKnown RBP3.54□□□□□ -1.84
LINC00616-205ENST00000514600 DMXL2Q8TDJ6 3036 aa3.54□□□□□ -1.84
LINC00616-205ENST00000514600 KRTAP29-1A8MX34 341 aaPredicted RBP3.54□□□□□ -1.84
LINC00616-205ENST00000514600 UQCR11O14957 56 aa3.54□□□□□ -1.84
LINC00616-205ENST00000514600 FLNBO75369 2602 aaKnown RBP3.54□□□□□ -1.84
LINC00616-205ENST00000514600 DSPP15924 2871 aaKnown RBP3.54□□□□□ -1.84
LINC00616-205ENST00000514600 FREM2Q5SZK8 3169 aa3.53□□□□□ -1.84
LINC00616-205ENST00000514600 CTXND1A0A1B0GTU2 59 aa3.53□□□□□ -1.84
LINC00616-205ENST00000514600 IGLV3-19P01714 112 aa3.53□□□□□ -1.84
LINC00616-205ENST00000514600 RNASE3P12724 160 aaKnown RBP3.53□□□□□ -1.84
LINC00616-205ENST00000514600 HCP5Q6MZN7 132 aa3.53□□□□□ -1.84
LINC00616-205ENST00000514600 SPRR4Q96PI1 79 aa3.53□□□□□ -1.84
LINC00616-205ENST00000514600 LINC00846Q9NV44 126 aa3.53□□□□□ -1.84
LINC00616-205ENST00000514600 MED13LQ71F56 2210 aa3.53□□□□□ -1.84
LINC00616-205ENST00000514600 RTTNQ86VV8 2226 aa3.53□□□□□ -1.84
LINC00616-205ENST00000514600 LAMA5O15230 3695 aa3.53□□□□□ -1.84
LINC00616-205ENST00000514600 BPTFQ12830 3046 aa3.53□□□□□ -1.84
LINC00616-205ENST00000514600 ASH1LQ9NR48 2969 aaKnown RBP3.53□□□□□ -1.84
LINC00616-205ENST00000514600 TRAV21A0A0B4J279 112 aa3.53□□□□□ -1.84
LINC00616-205ENST00000514600 CAV3P56539 151 aa3.53□□□□□ -1.84
LINC00616-205ENST00000514600 V9GYV3 84 aa3.53□□□□□ -1.84
LINC00616-205ENST00000514600 AKAP13Q12802 2813 aa3.52□□□□□ -1.85
LINC00616-205ENST00000514600 CELSR3Q9NYQ7 3312 aa3.52□□□□□ -1.85
LINC00616-205ENST00000514600 IGKV3D-15A0A087WSY6 115 aa3.52□□□□□ -1.85
LINC00616-205ENST00000514600 MGPP08493 103 aa3.52□□□□□ -1.85
LINC00616-205ENST00000514600 DEFB134Q4QY38 66 aa3.52□□□□□ -1.85
LINC00616-205ENST00000514600 WFDC6Q9BQY6 131 aa3.51□□□□□ -1.85
LINC00616-205ENST00000514600 IGKV2-40A0A087WW87 121 aaPredicted RBP3.51□□□□□ -1.85
LINC00616-205ENST00000514600 H0Y9P7 68 aa3.51□□□□□ -1.85
LINC00616-205ENST00000514600 IGKV2D-40P01614 121 aaPredicted RBP3.51□□□□□ -1.85
LINC00616-205ENST00000514600 FXYD3Q14802 87 aa3.51□□□□□ -1.85
LINC00616-205ENST00000514600 ENHOQ6UWT2 76 aa3.51□□□□□ -1.85
LINC00616-205ENST00000514600 LINC00304Q8N9R0 145 aa3.51□□□□□ -1.85
LINC00616-205ENST00000514600 TMEM263Q8WUH6 116 aaKnown RBP3.51□□□□□ -1.85
LINC00616-205ENST00000514600 LINC00208Q96KT6 92 aa3.51□□□□□ -1.85
LINC00616-205ENST00000514600 ITPR1Q14643 2758 aa3.51□□□□□ -1.85
LINC00616-205ENST00000514600 MAST4O15021 2626 aa3.5□□□□□ -1.85
LINC00616-205ENST00000514600 SHANK1Q9Y566 2161 aa3.5□□□□□ -1.85
LINC00616-205ENST00000514600 IGKV2-29A2NJV5 120 aaPredicted RBP3.5□□□□□ -1.85
LINC00616-205ENST00000514600 F5P12259 2224 aa3.5□□□□□ -1.85
LINC00616-205ENST00000514600 PRB1P04280 392 aa3.49□□□□□ -1.85
LINC00616-205ENST00000514600 RPL37AP61513 92 aaKnown RBP3.49□□□□□ -1.85
LINC00616-205ENST00000514600 DEFB124Q8NES8 71 aa3.49□□□□□ -1.85
LINC00616-205ENST00000514600 TRGV4A0A0C4DH28 118 aa3.49□□□□□ -1.85
LINC00616-205ENST00000514600 ALPK2Q86TB3 2170 aa3.49□□□□□ -1.85
LINC00616-205ENST00000514600 IGSF10Q6WRI0 2623 aa3.49□□□□□ -1.85
LINC00616-205ENST00000514600 HELZ2Q9BYK8 2649 aaKnown RBP3.49□□□□□ -1.85
LINC00616-205ENST00000514600 A0A1W2PNN7 141 aa3.48□□□□□ -1.85
LINC00616-205ENST00000514600 NDUFB1O75438 58 aa3.48□□□□□ -1.85
LINC00616-205ENST00000514600 LINC00322Q6ZN03 302 aaPredicted RBP3.48□□□□□ -1.85
LINC00616-205ENST00000514600 COL4A2P08572 1712 aa3.48□□□□□ -1.85
LINC00616-205ENST00000514600 ADAMTS9Q9P2N4 1935 aa3.48□□□□□ -1.85
LINC00616-205ENST00000514600 NAV2Q8IVL1 2488 aa3.48□□□□□ -1.85
LINC00616-205ENST00000514600 TRAV40A0A0B4J280 105 aa3.48□□□□□ -1.85
LINC00616-205ENST00000514600 LCE6AA0A183 80 aa3.48□□□□□ -1.85
LINC00616-205ENST00000514600 SPATA8Q6RVD6 105 aa3.48□□□□□ -1.85
LINC00616-205ENST00000514600 C10orf113Q5VZT2 155 aa3.47□□□□□ -1.85
LINC00616-205ENST00000514600 WFDC9Q8NEX5 89 aa3.47□□□□□ -1.85
LINC00616-205ENST00000514600 CACNA1EQ15878 2313 aa3.46□□□□□ -1.86
LINC00616-205ENST00000514600 TRAV1-2A0A0B4J238 106 aa3.46□□□□□ -1.86
LINC00616-205ENST00000514600 C5orf56Q8N8D9 126 aa3.46□□□□□ -1.86
LINC00616-205ENST00000514600 Q96NJ1 140 aa3.46□□□□□ -1.86
LINC00616-205ENST00000514600 ZCCHC13Q8WW36 166 aaKnown RBP3.46□□□□□ -1.86
LINC00616-205ENST00000514600 LINC00472Q9H8W2 130 aa3.46□□□□□ -1.86
LINC00616-205ENST00000514600 ASCC3Q8N3C0 2202 aaKnown RBP3.46□□□□□ -1.86
LINC00616-205ENST00000514600 ASXL3Q9C0F0 2248 aa3.46□□□□□ -1.86
LINC00616-205ENST00000514600 TENM4Q6N022 2769 aa3.45□□□□□ -1.86
LINC00616-205ENST00000514600 KALRNO60229 2985 aa3.45□□□□□ -1.86
LINC00616-205ENST00000514600 ABCA1O95477 2261 aa3.45□□□□□ -1.86
LINC00616-205ENST00000514600 IGKV2D-29A0A075B6S2 120 aaPredicted RBP3.45□□□□□ -1.86
LINC00616-205ENST00000514600 OBSCN-AS1Q96MR7 158 aa3.45□□□□□ -1.86
LINC00616-205ENST00000514600 ANKRD17O75179 2603 aaKnown RBP3.45□□□□□ -1.86
LINC00616-205ENST00000514600 SMIM27A0A1W2PRY6 76 aa3.44□□□□□ -1.86
LINC00616-205ENST00000514600 DEFB106AQ8N104 65 aa3.44□□□□□ -1.86
LINC00616-205ENST00000514600 PRRC2AP48634 2157 aaKnown RBP3.44□□□□□ -1.86
LINC00616-205ENST00000514600 UNC79Q9P2D8 2635 aa3.44□□□□□ -1.86
LINC00616-205ENST00000514600 APC2O95996 2303 aa3.44□□□□□ -1.86
LINC00616-205ENST00000514600 ACACAQ13085 2346 aa3.44□□□□□ -1.86
LINC00616-205ENST00000514600 TRBV6-1A0A0K0K1D8 114 aa3.44□□□□□ -1.86
LINC00616-205ENST00000514600 IGKV4-1P06312 121 aa3.44□□□□□ -1.86
LINC00616-205ENST00000514600 C10orf55Q5SWW7 151 aa3.44□□□□□ -1.86
LINC00616-205ENST00000514600 TXNDC17Q9BRA2 123 aa3.44□□□□□ -1.86
LINC00616-205ENST00000514600 HECTD1Q9ULT8 2610 aa3.43□□□□□ -1.86
LINC00616-205ENST00000514600 FN1P02751 2386 aaKnown RBP3.43□□□□□ -1.86
LINC00616-205ENST00000514600 TRGV1A0A0A0MS02 117 aa3.43□□□□□ -1.86
LINC00616-205ENST00000514600 J3QKU1 62 aa3.43□□□□□ -1.86
LINC00616-205ENST00000514600 URB1O60287 2271 aaKnown RBP3.43□□□□□ -1.86
LINC00616-205ENST00000514600 COL12A1Q99715 3063 aa3.43□□□□□ -1.86
LINC00616-205ENST00000514600 ZNF462Q96JM2 2506 aa3.43□□□□□ -1.86
LINC00616-205ENST00000514600 FXYD4P59646 89 aa3.43□□□□□ -1.86
LINC00616-205ENST00000514600 DEFB119Q8N690 84 aa3.43□□□□□ -1.86
LINC00616-205ENST00000514600 UBL5Q9BZL1 73 aa3.43□□□□□ -1.86
LINC00616-205ENST00000514600 CACNA1CQ13936 2221 aa3.42□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms