RNA–Protein interactions for RNA: ENST00000512392.5

CHD1-208, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 2

Gene CHD1, Length 1,968 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-208ENST00000512392 SSC5DA1L4H1 1573 aa2.98□□□□□ -1.93
CHD1-208ENST00000512392 HAMPP81172 84 aa2.98□□□□□ -1.93
CHD1-208ENST00000512392 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa2.98□□□□□ -1.93
CHD1-208ENST00000512392 CMC2Q9NRP2 79 aa2.98□□□□□ -1.93
CHD1-208ENST00000512392 PP632Q6XCG6 107 aa2.98□□□□□ -1.93
CHD1-208ENST00000512392 GVQW2A0A096LPI5 108 aaPredicted RBP2.97□□□□□ -1.93
CHD1-208ENST00000512392 LY6G6CO95867 125 aa2.97□□□□□ -1.93
CHD1-208ENST00000512392 UBL5Q9BZL1 73 aa2.97□□□□□ -1.93
CHD1-208ENST00000512392 NMES1Q9C002 83 aa2.97□□□□□ -1.93
CHD1-208ENST00000512392 KMT2BQ9UMN6 2715 aaPredicted RBP2.97□□□□□ -1.93
CHD1-208ENST00000512392 COL4A4P53420 1690 aaPredicted RBP2.96□□□□□ -1.94
CHD1-208ENST00000512392 ANKRD36CQ5JPF3 1778 aa2.96□□□□□ -1.94
CHD1-208ENST00000512392 NDUFA4O00483 81 aa2.96□□□□□ -1.94
CHD1-208ENST00000512392 SSBP3-AS1Q7Z2R9 100 aa2.96□□□□□ -1.94
CHD1-208ENST00000512392 CACNA1GO43497 2377 aa2.96□□□□□ -1.94
CHD1-208ENST00000512392 LRRC37A2A6NM11 1700 aa2.95□□□□□ -1.94
CHD1-208ENST00000512392 SMIM11BQ8TCY0 68 aa2.95□□□□□ -1.94
CHD1-208ENST00000512392 NRXN3Q9Y4C0 1643 aa2.95□□□□□ -1.94
CHD1-208ENST00000512392 PRB2P02812 416 aaPredicted RBP2.94□□□□□ -1.94
CHD1-208ENST00000512392 PLAC4Q8WY50 150 aa2.94□□□□□ -1.94
CHD1-208ENST00000512392 COX7BP24311 80 aa2.94□□□□□ -1.94
CHD1-208ENST00000512392 CACNA1CQ13936 2221 aa2.94□□□□□ -1.94
CHD1-208ENST00000512392 KRTAP10-1P60331 282 aa2.93□□□□□ -1.94
CHD1-208ENST00000512392 C10orf99Q6UWK7 81 aa2.93□□□□□ -1.94
CHD1-208ENST00000512392 KRTAP13-4Q3LI77 160 aa2.92□□□□□ -1.94
CHD1-208ENST00000512392 CADP27708 2225 aa2.92□□□□□ -1.94
CHD1-208ENST00000512392 KRTAP12-2P59991 146 aa2.91□□□□□ -1.94
CHD1-208ENST00000512392 FAM208AQ9UK61 1670 aaKnown RBP2.91□□□□□ -1.94
CHD1-208ENST00000512392 ABRACLQ9P1F3 81 aa2.91□□□□□ -1.94
CHD1-208ENST00000512392 PRB1P04280 392 aa2.9□□□□□ -1.95
CHD1-208ENST00000512392 M0R1W7 72 aa2.89□□□□□ -1.95
CHD1-208ENST00000512392 NCR3O14931 201 aa2.89□□□□□ -1.95
CHD1-208ENST00000512392 NWD1Q149M9 1564 aa2.89□□□□□ -1.95
CHD1-208ENST00000512392 ARL14EPLP0DKL9 152 aa2.89□□□□□ -1.95
CHD1-208ENST00000512392 UNQ6190/PRO20217Q6UXQ8 127 aa2.89□□□□□ -1.95
CHD1-208ENST00000512392 ASXL3Q9C0F0 2248 aa2.87□□□□□ -1.95
CHD1-208ENST00000512392 DEFB103AP81534 67 aa2.86□□□□□ -1.95
CHD1-208ENST00000512392 DDX60LQ5H9U9 1706 aaKnown RBP2.85□□□□□ -1.95
CHD1-208ENST00000512392 BRD3OSQ6XYD6 125 aa2.85□□□□□ -1.95
CHD1-208ENST00000512392 ASCC3Q8N3C0 2202 aaKnown RBP2.84□□□□□ -1.95
CHD1-208ENST00000512392 SPRR5A0A1B0GTR4 108 aa2.84□□□□□ -1.95
CHD1-208ENST00000512392 IGIPA6NJ69 53 aa2.84□□□□□ -1.95
CHD1-208ENST00000512392 LCE3EQ5T5B0 92 aa2.84□□□□□ -1.95
CHD1-208ENST00000512392 I3L3M4 83 aa2.83□□□□□ -1.96
CHD1-208ENST00000512392 LMO7Q8WWI1 1683 aa2.83□□□□□ -1.96
CHD1-208ENST00000512392 PLXNB2O15031 1838 aa2.83□□□□□ -1.96
CHD1-208ENST00000512392 RPL37P61927 97 aaKnown RBP2.83□□□□□ -1.96
CHD1-208ENST00000512392 SMIM27A0A1W2PRY6 76 aa2.82□□□□□ -1.96
CHD1-208ENST00000512392 PLNP26678 52 aa2.82□□□□□ -1.96
CHD1-208ENST00000512392 QSER1Q2KHR3 1735 aa2.82□□□□□ -1.96
CHD1-208ENST00000512392 COX6B1P14854 86 aa2.81□□□□□ -1.96
CHD1-208ENST00000512392 KCNQ1DNQ9H478 68 aa2.81□□□□□ -1.96
CHD1-208ENST00000512392 CRIPTQ9P021 101 aa2.81□□□□□ -1.96
CHD1-208ENST00000512392 A0A0G2JMZ2 1700 aa2.81□□□□□ -1.96
CHD1-208ENST00000512392 CACNA1BQ00975 2339 aa2.8□□□□□ -1.96
CHD1-208ENST00000512392 LINC00575Q6W349 94 aa2.8□□□□□ -1.96
CHD1-208ENST00000512392 NFAT5O94916 1531 aa2.8□□□□□ -1.96
CHD1-208ENST00000512392 CPSF4LA6NMK7 179 aaKnown RBP2.8□□□□□ -1.96
CHD1-208ENST00000512392 PCOTHQ58A44 107 aa2.8□□□□□ -1.96
CHD1-208ENST00000512392 TNCP24821 2201 aa2.79□□□□□ -1.96
CHD1-208ENST00000512392 BAHCC1Q9P281 2608 aa2.79□□□□□ -1.96
CHD1-208ENST00000512392 TECTAO75443 2155 aa2.78□□□□□ -1.96
CHD1-208ENST00000512392 DDX60Q8IY21 1712 aaKnown RBP2.78□□□□□ -1.96
CHD1-208ENST00000512392 SPINK13Q1W4C9 94 aa2.78□□□□□ -1.97
CHD1-208ENST00000512392 ETDCA0A1B0GVM5 59 aa2.77□□□□□ -1.97
CHD1-208ENST00000512392 TIMM8BQ9Y5J9 83 aaPredicted RBP2.77□□□□□ -1.97
CHD1-208ENST00000512392 TOGARAM1Q9Y4F4 1720 aa2.76□□□□□ -1.97
CHD1-208ENST00000512392 PIN1P1O15428 100 aa2.76□□□□□ -1.97
CHD1-208ENST00000512392 SPINK4O60575 86 aa2.76□□□□□ -1.97
CHD1-208ENST00000512392 DEFB114Q30KQ6 69 aa2.76□□□□□ -1.97
CHD1-208ENST00000512392 KRTAP5-4Q6L8H1 288 aa2.76□□□□□ -1.97
CHD1-208ENST00000512392 LRRC37AA6NMS7 1700 aa2.75□□□□□ -1.97
CHD1-208ENST00000512392 ZDBF2Q9HCK1 2354 aa2.74□□□□□ -1.97
CHD1-208ENST00000512392 UBE2DNLQ8IWF7 75 aa2.74□□□□□ -1.97
CHD1-208ENST00000512392 C4AP0C0L4 1744 aa2.74□□□□□ -1.97
CHD1-208ENST00000512392 C4BP0C0L5 1744 aa2.74□□□□□ -1.97
CHD1-208ENST00000512392 SPTY2D1-AS1A0A0U1RR47 76 aa2.74□□□□□ -1.97
CHD1-208ENST00000512392 ANGP03950 147 aaKnown RBP2.73□□□□□ -1.97
CHD1-208ENST00000512392 KRTAP12-1P59990 96 aa2.73□□□□□ -1.97
CHD1-208ENST00000512392 KRTAP13-3Q3SY46 172 aa2.73□□□□□ -1.97
CHD1-208ENST00000512392 RPL38P63173 70 aaKnown RBP2.72□□□□□ -1.97
CHD1-208ENST00000512392 SERF2P84101 59 aa2.72□□□□□ -1.97
CHD1-208ENST00000512392 CRIP1P50238 77 aa2.71□□□□□ -1.98
CHD1-208ENST00000512392 KRTAP5-1Q6L8H4 278 aa2.7□□□□□ -1.98
CHD1-208ENST00000512392 GOLGB1Q14789 3259 aaKnown RBP2.7□□□□□ -1.98
CHD1-208ENST00000512392 URB1O60287 2271 aaKnown RBP2.7□□□□□ -1.98
CHD1-208ENST00000512392 KNTC1P50748 2209 aa2.69□□□□□ -1.98
CHD1-208ENST00000512392 LINC01546A6NGU7 62 aa2.69□□□□□ -1.98
CHD1-208ENST00000512392 BPTFQ12830 3046 aa2.69□□□□□ -1.98
CHD1-208ENST00000512392 EP400Q96L91 3159 aa2.69□□□□□ -1.98
CHD1-208ENST00000512392 JMJD1CQ15652 2540 aa2.67□□□□□ -1.98
CHD1-208ENST00000512392 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP2.67□□□□□ -1.98
CHD1-208ENST00000512392 KRTAP10-10P60014 251 aa2.67□□□□□ -1.98
CHD1-208ENST00000512392 GOLGA4Q13439 2230 aaKnown RBP2.66□□□□□ -1.98
CHD1-208ENST00000512392 LOC730098B7Z3J9 87 aa2.65□□□□□ -1.98
CHD1-208ENST00000512392 NDUFA3O95167 84 aa2.65□□□□□ -1.98
CHD1-208ENST00000512392 KRTAP4-4Q9BYR3 166 aa2.65□□□□□ -1.98
CHD1-208ENST00000512392 DEFB131BA0A096LNP1 70 aa2.65□□□□□ -1.99
CHD1-208ENST00000512392 KRTAP6-3Q3LI67 103 aa2.64□□□□□ -1.99
CHD1-208ENST00000512392 PRO3102Q9H379 93 aa2.64□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 97 ms