RNA–Protein interactions for RNA: ENST00000506089.1

SMARCAD1-205, Transcript of SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1, humanhuman

TSL 4

Gene SMARCAD1, Length 554 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAD1-205ENST00000506089 KRTAP19-3Q7Z4W3 81 aa0.89□□□□□ -2.27
SMARCAD1-205ENST00000506089 POLR1AO95602 1720 aaPredicted RBP0.89□□□□□ -2.27
SMARCAD1-205ENST00000506089 SCN11AQ9UI33 1791 aa0.88□□□□□ -2.27
SMARCAD1-205ENST00000506089 CCDC88BA6NC98 1476 aa0.88□□□□□ -2.27
SMARCAD1-205ENST00000506089 COX8AP10176 69 aa0.88□□□□□ -2.27
SMARCAD1-205ENST00000506089 Q5VSD8 79 aa0.88□□□□□ -2.27
SMARCAD1-205ENST00000506089 KRTAP5-10Q6L8G5 202 aa0.88□□□□□ -2.27
SMARCAD1-205ENST00000506089 C18orf32Q8TCD1 76 aa0.88□□□□□ -2.27
SMARCAD1-205ENST00000506089 TIAM2Q8IVF5 1701 aa0.88□□□□□ -2.27
SMARCAD1-205ENST00000506089 MAGI3Q5TCQ9 1506 aa0.88□□□□□ -2.27
SMARCAD1-205ENST00000506089 URB1O60287 2271 aaKnown RBP0.87□□□□□ -2.27
SMARCAD1-205ENST00000506089 ABCA2Q9BZC7 2435 aa0.87□□□□□ -2.27
SMARCAD1-205ENST00000506089 GAFA1Q96PS6 74 aa0.87□□□□□ -2.27
SMARCAD1-205ENST00000506089 CRIPTQ9P021 101 aa0.87□□□□□ -2.27
SMARCAD1-205ENST00000506089 USP9XQ93008 2570 aaPredicted RBP0.87□□□□□ -2.27
SMARCAD1-205ENST00000506089 KALRNO60229 2985 aa0.87□□□□□ -2.27
SMARCAD1-205ENST00000506089 DOPEY2Q9Y3R5 2298 aa0.86□□□□□ -2.27
SMARCAD1-205ENST00000506089 CHD8Q9HCK8 2581 aa0.86□□□□□ -2.27
SMARCAD1-205ENST00000506089 TNRC18O15417 2968 aaPredicted RBP0.86□□□□□ -2.27
SMARCAD1-205ENST00000506089 TRAV21A0A0B4J279 112 aa0.86□□□□□ -2.27
SMARCAD1-205ENST00000506089 SPTY2D1-AS1A0A0U1RR47 76 aa0.86□□□□□ -2.27
SMARCAD1-205ENST00000506089 COX7BP24311 80 aa0.86□□□□□ -2.27
SMARCAD1-205ENST00000506089 TSC2P49815 1807 aa0.86□□□□□ -2.27
SMARCAD1-205ENST00000506089 CEP170BQ9Y4F5 1589 aaPredicted RBP0.86□□□□□ -2.27
SMARCAD1-205ENST00000506089 FMN2Q9NZ56 1722 aa0.86□□□□□ -2.27
SMARCAD1-205ENST00000506089 ANKRD17O75179 2603 aaKnown RBP0.85□□□□□ -2.27
SMARCAD1-205ENST00000506089 I3L3M4 83 aa0.85□□□□□ -2.27
SMARCAD1-205ENST00000506089 CFDP00746 253 aaPredicted RBP0.85□□□□□ -2.27
SMARCAD1-205ENST00000506089 RPL38P63173 70 aaKnown RBP0.85□□□□□ -2.27
SMARCAD1-205ENST00000506089 MEGF8Q7Z7M0 2845 aa0.85□□□□□ -2.27
SMARCAD1-205ENST00000506089 BCORQ6W2J9 1755 aa0.85□□□□□ -2.27
SMARCAD1-205ENST00000506089 TEP1Q99973 2627 aaKnown RBP0.85□□□□□ -2.27
SMARCAD1-205ENST00000506089 PCNTO95613 3336 aa0.84□□□□□ -2.27
SMARCAD1-205ENST00000506089 C2CD3Q4AC94 2353 aa0.84□□□□□ -2.27
SMARCAD1-205ENST00000506089 MYO5CQ9NQX4 1742 aa0.84□□□□□ -2.27
SMARCAD1-205ENST00000506089 COL6A5A8TX70 2615 aa0.84□□□□□ -2.27
SMARCAD1-205ENST00000506089 SMIM13P0DJ93 91 aa0.84□□□□□ -2.27
SMARCAD1-205ENST00000506089 WFDC9Q8NEX5 89 aa0.84□□□□□ -2.27
SMARCAD1-205ENST00000506089 SMCO4Q9NRQ5 59 aa0.84□□□□□ -2.27
SMARCAD1-205ENST00000506089 USP32Q8NFA0 1604 aa0.84□□□□□ -2.28
SMARCAD1-205ENST00000506089 BPTFQ12830 3046 aa0.84□□□□□ -2.28
SMARCAD1-205ENST00000506089 ZNF831Q5JPB2 1677 aa0.84□□□□□ -2.28
SMARCAD1-205ENST00000506089 CFAP43Q8NDM7 1665 aa0.84□□□□□ -2.28
SMARCAD1-205ENST00000506089 USF3Q68DE3 2245 aa0.84□□□□□ -2.28
SMARCAD1-205ENST00000506089 ARFGEF2Q9Y6D5 1785 aa0.83□□□□□ -2.28
SMARCAD1-205ENST00000506089 A0A087WXM4 84 aa0.83□□□□□ -2.28
SMARCAD1-205ENST00000506089 DOPEY1Q5JWR5 2465 aa0.83□□□□□ -2.28
SMARCAD1-205ENST00000506089 FBN2P35556 2912 aa0.83□□□□□ -2.28
SMARCAD1-205ENST00000506089 CHD6Q8TD26 2715 aa0.83□□□□□ -2.28
SMARCAD1-205ENST00000506089 UGGT2Q9NYU1 1516 aa0.83□□□□□ -2.28
SMARCAD1-205ENST00000506089 MUC16Q8WXI7 14507 aa0.83□□□□□ -2.28
SMARCAD1-205ENST00000506089 IQGAP3Q86VI3 1631 aa0.82□□□□□ -2.28
SMARCAD1-205ENST00000506089 SPTBN2O15020 2390 aa0.82□□□□□ -2.28
SMARCAD1-205ENST00000506089 IFI27P40305 119 aaPredicted RBP0.82□□□□□ -2.28
SMARCAD1-205ENST00000506089 EPG5Q9HCE0 2579 aa0.82□□□□□ -2.28
SMARCAD1-205ENST00000506089 HECTD1Q9ULT8 2610 aa0.82□□□□□ -2.28
SMARCAD1-205ENST00000506089 ANKRD11Q6UB99 2663 aaPredicted RBP0.82□□□□□ -2.28
SMARCAD1-205ENST00000506089 PREX1Q8TCU6 1659 aa0.81□□□□□ -2.28
SMARCAD1-205ENST00000506089 POLQO75417 2590 aa0.81□□□□□ -2.28
SMARCAD1-205ENST00000506089 ITPR3Q14573 2671 aa0.81□□□□□ -2.28
SMARCAD1-205ENST00000506089 CPSF4LA6NMK7 179 aaKnown RBP0.81□□□□□ -2.28
SMARCAD1-205ENST00000506089 UMAD1C9J7I0 102 aa0.81□□□□□ -2.28
SMARCAD1-205ENST00000506089 PRH1P02810 166 aa0.81□□□□□ -2.28
SMARCAD1-205ENST00000506089 Q5BKY6 102 aa0.81□□□□□ -2.28
SMARCAD1-205ENST00000506089 VWFP04275 2813 aa0.81□□□□□ -2.28
SMARCAD1-205ENST00000506089 DOT1LQ8TEK3 1739 aa0.81□□□□□ -2.28
SMARCAD1-205ENST00000506089 TENM3Q9P273 2699 aa0.81□□□□□ -2.28
SMARCAD1-205ENST00000506089 NOTCH1P46531 2555 aa0.8□□□□□ -2.28
SMARCAD1-205ENST00000506089 SETD2Q9BYW2 2564 aaPredicted RBP0.8□□□□□ -2.28
SMARCAD1-205ENST00000506089 PDCD5O14737 125 aa0.8□□□□□ -2.28
SMARCAD1-205ENST00000506089 UBR4Q5T4S7 5183 aa0.8□□□□□ -2.28
SMARCAD1-205ENST00000506089 ABCA12Q86UK0 2595 aa0.8□□□□□ -2.28
SMARCAD1-205ENST00000506089 MAST4O15021 2626 aa0.8□□□□□ -2.28
SMARCAD1-205ENST00000506089 TNCP24821 2201 aa0.8□□□□□ -2.28
SMARCAD1-205ENST00000506089 CLIP1P30622 1438 aa0.8□□□□□ -2.28
SMARCAD1-205ENST00000506089 CACNA1EQ15878 2313 aa0.8□□□□□ -2.28
SMARCAD1-205ENST00000506089 CELSR3Q9NYQ7 3312 aa0.79□□□□□ -2.28
SMARCAD1-205ENST00000506089 LAMA2P24043 3122 aaKnown RBP0.79□□□□□ -2.28
SMARCAD1-205ENST00000506089 CCL22O00626 93 aa0.79□□□□□ -2.28
SMARCAD1-205ENST00000506089 SPRR1BP22528 89 aa0.79□□□□□ -2.28
SMARCAD1-205ENST00000506089 SMR3AQ99954 134 aa0.79□□□□□ -2.28
SMARCAD1-205ENST00000506089 PTPRZ1P23471 2315 aaPredicted RBP0.79□□□□□ -2.28
SMARCAD1-205ENST00000506089 F8P00451 2351 aa0.79□□□□□ -2.28
SMARCAD1-205ENST00000506089 NAV2Q8IVL1 2488 aa0.79□□□□□ -2.28
SMARCAD1-205ENST00000506089 PTPN13Q12923 2485 aa0.78□□□□□ -2.28
SMARCAD1-205ENST00000506089 FRAS1Q86XX4 4008 aa0.78□□□□□ -2.28
SMARCAD1-205ENST00000506089 VCANP13611 3396 aa0.78□□□□□ -2.28
SMARCAD1-205ENST00000506089 KRTAP2-3P0C7H8 128 aa0.78□□□□□ -2.28
SMARCAD1-205ENST00000506089 SPRR1AP35321 89 aa0.78□□□□□ -2.28
SMARCAD1-205ENST00000506089 MRPL34Q9BQ48 92 aaKnown RBP0.78□□□□□ -2.28
SMARCAD1-205ENST00000506089 KRTAP2-4Q9BYR9 128 aa0.78□□□□□ -2.28
SMARCAD1-205ENST00000506089 KRTAP2-1Q9BYU5 128 aa0.78□□□□□ -2.28
SMARCAD1-205ENST00000506089 MACF1Q9UPN3 7388 aaKnown RBP0.78□□□□□ -2.28
SMARCAD1-205ENST00000506089 PTPRQQ9UMZ3 2332 aa0.78□□□□□ -2.28
SMARCAD1-205ENST00000506089 DNAH12Q6ZR08 3092 aa0.78□□□□□ -2.29
SMARCAD1-205ENST00000506089 MAP1BP46821 2468 aaKnown RBP0.77□□□□□ -2.29
SMARCAD1-205ENST00000506089 ZNF292O60281 2723 aa0.77□□□□□ -2.29
SMARCAD1-205ENST00000506089 SPINK1P00995 79 aa0.77□□□□□ -2.29
SMARCAD1-205ENST00000506089 IFI6P09912 130 aa0.77□□□□□ -2.29
SMARCAD1-205ENST00000506089 HMGA1P17096 107 aaKnown RBP0.77□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 133.9 ms