RNA–Protein interactions for RNA: ENST00000503627.2

GYPA-203, Transcript of glycophorin A (MNS blood group), humanhuman

TSL 1 (best) BASIC

Gene GYPA, Length 318 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPA-203ENST00000503627 TIAM2Q8IVF5 1701 aa1.38□□□□□ -2.19
GYPA-203ENST00000503627 UBR3Q6ZT12 1888 aa1.38□□□□□ -2.19
GYPA-203ENST00000503627 TRAV21A0A0B4J279 112 aa1.38□□□□□ -2.19
GYPA-203ENST00000503627 H3BVH4 76 aa1.38□□□□□ -2.19
GYPA-203ENST00000503627 DEFB123Q8N688 67 aa1.38□□□□□ -2.19
GYPA-203ENST00000503627 GAFA1Q96PS6 74 aa1.38□□□□□ -2.19
GYPA-203ENST00000503627 CACNA1HO95180 2353 aa1.38□□□□□ -2.19
GYPA-203ENST00000503627 PLCH1Q4KWH8 1693 aa1.38□□□□□ -2.19
GYPA-203ENST00000503627 LRRC37AA6NMS7 1700 aa1.37□□□□□ -2.19
GYPA-203ENST00000503627 NDUFB1O75438 58 aa1.37□□□□□ -2.19
GYPA-203ENST00000503627 PIGYQ3MUY2 71 aa1.37□□□□□ -2.19
GYPA-203ENST00000503627 SETBP1Q9Y6X0 1596 aa1.37□□□□□ -2.19
GYPA-203ENST00000503627 QSER1Q2KHR3 1735 aa1.37□□□□□ -2.19
GYPA-203ENST00000503627 EFCAB5A4FU69 1503 aa1.35□□□□□ -2.19
GYPA-203ENST00000503627 BCORQ6W2J9 1755 aa1.35□□□□□ -2.19
GYPA-203ENST00000503627 MEGF8Q7Z7M0 2845 aa1.35□□□□□ -2.19
GYPA-203ENST00000503627 ABCA9Q8IUA7 1624 aa1.34□□□□□ -2.19
GYPA-203ENST00000503627 USP32Q8NFA0 1604 aa1.34□□□□□ -2.19
GYPA-203ENST00000503627 CCDC180Q9P1Z9 1646 aa1.34□□□□□ -2.19
GYPA-203ENST00000503627 HILPDAQ9Y5L2 63 aa1.34□□□□□ -2.19
GYPA-203ENST00000503627 WIZO95785 1651 aa1.33□□□□□ -2.2
GYPA-203ENST00000503627 FXYD6-FXYD2A0A087WZ82 144 aa1.33□□□□□ -2.2
GYPA-203ENST00000503627 IFI6P09912 130 aa1.33□□□□□ -2.2
GYPA-203ENST00000503627 Q8IZM0 81 aa1.33□□□□□ -2.2
GYPA-203ENST00000503627 ASXL1Q8IXJ9 1541 aa1.33□□□□□ -2.2
GYPA-203ENST00000503627 DOT1LQ8TEK3 1739 aa1.32□□□□□ -2.2
GYPA-203ENST00000503627 PARP4Q9UKK3 1724 aaKnown RBP1.32□□□□□ -2.2
GYPA-203ENST00000503627 PLCE1Q9P212 2302 aa1.32□□□□□ -2.2
GYPA-203ENST00000503627 COX7BP24311 80 aa1.32□□□□□ -2.2
GYPA-203ENST00000503627 NREPQ16612 68 aa1.32□□□□□ -2.2
GYPA-203ENST00000503627 GNG13Q9P2W3 67 aa1.32□□□□□ -2.2
GYPA-203ENST00000503627 URB1O60287 2271 aaKnown RBP1.31□□□□□ -2.2
GYPA-203ENST00000503627 CDC42BPGQ6DT37 1551 aa1.31□□□□□ -2.2
GYPA-203ENST00000503627 CICQ96RK0 1608 aaPredicted RBP1.31□□□□□ -2.2
GYPA-203ENST00000503627 K7EQZ3 153 aa1.31□□□□□ -2.2
GYPA-203ENST00000503627 RICTORQ6R327 1708 aa1.31□□□□□ -2.2
GYPA-203ENST00000503627 HFM1A2PYH4 1435 aa1.31□□□□□ -2.2
GYPA-203ENST00000503627 CD163L1Q9NR16 1453 aa1.31□□□□□ -2.2
GYPA-203ENST00000503627 LMTK2Q8IWU2 1503 aa1.3□□□□□ -2.2
GYPA-203ENST00000503627 SPTY2D1-AS1A0A0U1RR47 76 aa1.3□□□□□ -2.2
GYPA-203ENST00000503627 COX8AP10176 69 aa1.3□□□□□ -2.2
GYPA-203ENST00000503627 S100ZQ8WXG8 99 aa1.3□□□□□ -2.2
GYPA-203ENST00000503627 CRIPTQ9P021 101 aa1.3□□□□□ -2.2
GYPA-203ENST00000503627 RPL38P63173 70 aaKnown RBP1.29□□□□□ -2.2
GYPA-203ENST00000503627 CRCT1Q9UGL9 99 aa1.29□□□□□ -2.2
GYPA-203ENST00000503627 TTC28Q96AY4 2481 aa1.29□□□□□ -2.2
GYPA-203ENST00000503627 EIF2AK4Q9P2K8 1649 aaKnown RBP1.29□□□□□ -2.2
GYPA-203ENST00000503627 USMG5Q96IX5 58 aa1.28□□□□□ -2.2
GYPA-203ENST00000503627 FMN2Q9NZ56 1722 aa1.28□□□□□ -2.2
GYPA-203ENST00000503627 TSC2P49815 1807 aa1.28□□□□□ -2.2
GYPA-203ENST00000503627 C2CD3Q4AC94 2353 aa1.28□□□□□ -2.2
GYPA-203ENST00000503627 NRAPQ86VF7 1730 aa1.27□□□□□ -2.21
GYPA-203ENST00000503627 PREX1Q8TCU6 1659 aa1.27□□□□□ -2.21
GYPA-203ENST00000503627 A0A087WWC5 75 aa1.27□□□□□ -2.21
GYPA-203ENST00000503627 ATXN8Q156A1 80 aa1.27□□□□□ -2.21
GYPA-203ENST00000503627 DOPEY2Q9Y3R5 2298 aa1.27□□□□□ -2.21
GYPA-203ENST00000503627 NHSQ6T4R5 1651 aa1.26□□□□□ -2.21
GYPA-203ENST00000503627 BIVM-ERCC5R4GMW8 1640 aa1.26□□□□□ -2.21
GYPA-203ENST00000503627 HMGA1P17096 107 aaKnown RBP1.26□□□□□ -2.21
GYPA-203ENST00000503627 TIAM1Q13009 1591 aa1.25□□□□□ -2.21
GYPA-203ENST00000503627 ANKRD50Q9ULJ7 1429 aa1.25□□□□□ -2.21
GYPA-203ENST00000503627 HMCN1Q96RW7 5635 aa1.25□□□□□ -2.21
GYPA-203ENST00000503627 SPTBN2O15020 2390 aa1.25□□□□□ -2.21
GYPA-203ENST00000503627 I3L3M4 83 aa1.25□□□□□ -2.21
GYPA-203ENST00000503627 KRTAP19-3Q7Z4W3 81 aa1.25□□□□□ -2.21
GYPA-203ENST00000503627 KRTAP4-1Q9BYQ7 146 aa1.25□□□□□ -2.21
GYPA-203ENST00000503627 USF3Q68DE3 2245 aa1.25□□□□□ -2.21
GYPA-203ENST00000503627 DIP2AQ14689 1571 aa1.24□□□□□ -2.21
GYPA-203ENST00000503627 NWD1Q149M9 1564 aa1.24□□□□□ -2.21
GYPA-203ENST00000503627 LCE6AA0A183 80 aa1.23□□□□□ -2.21
GYPA-203ENST00000503627 COX6B1P14854 86 aa1.23□□□□□ -2.21
GYPA-203ENST00000503627 POLQO75417 2590 aa1.22□□□□□ -2.21
GYPA-203ENST00000503627 CPSF4LA6NMK7 179 aaKnown RBP1.22□□□□□ -2.21
GYPA-203ENST00000503627 NDUFA4O00483 81 aa1.22□□□□□ -2.21
GYPA-203ENST00000503627 Q5VSD8 79 aa1.22□□□□□ -2.21
GYPA-203ENST00000503627 NESP48681 1621 aa1.22□□□□□ -2.21
GYPA-203ENST00000503627 F8P00451 2351 aa1.21□□□□□ -2.22
GYPA-203ENST00000503627 DDX60LQ5H9U9 1706 aaKnown RBP1.21□□□□□ -2.22
GYPA-203ENST00000503627 SFTA3P0C7M3 94 aa1.21□□□□□ -2.22
GYPA-203ENST00000503627 C3orf79P0CE67 100 aa1.21□□□□□ -2.22
GYPA-203ENST00000503627 CACNA1EQ15878 2313 aa1.21□□□□□ -2.22
GYPA-203ENST00000503627 TNRC6CQ9HCJ0 1690 aaKnown RBP1.2□□□□□ -2.22
GYPA-203ENST00000503627 ABCA6Q8N139 1617 aa1.19□□□□□ -2.22
GYPA-203ENST00000503627 FRAS1Q86XX4 4008 aa1.19□□□□□ -2.22
GYPA-203ENST00000503627 SPRR1AP35321 89 aa1.19□□□□□ -2.22
GYPA-203ENST00000503627 ENHOQ6UWT2 76 aa1.19□□□□□ -2.22
GYPA-203ENST00000503627 BDP1A6H8Y1 2624 aa1.19□□□□□ -2.22
GYPA-203ENST00000503627 PTPRZ1P23471 2315 aaPredicted RBP1.18□□□□□ -2.22
GYPA-203ENST00000503627 SPRR1BP22528 89 aa1.18□□□□□ -2.22
GYPA-203ENST00000503627 SMIM5Q71RC9 77 aa1.18□□□□□ -2.22
GYPA-203ENST00000503627 MRPL34Q9BQ48 92 aaKnown RBP1.18□□□□□ -2.22
GYPA-203ENST00000503627 TENM1Q9UKZ4 2725 aa1.18□□□□□ -2.22
GYPA-203ENST00000503627 RALGAPBQ86X10 1494 aa1.18□□□□□ -2.22
GYPA-203ENST00000503627 THOC2Q8NI27 1593 aaKnown RBP1.17□□□□□ -2.22
GYPA-203ENST00000503627 FBN3Q75N90 2809 aa1.17□□□□□ -2.22
GYPA-203ENST00000503627 ABCA12Q86UK0 2595 aa1.17□□□□□ -2.22
GYPA-203ENST00000503627 PIEZO2Q9H5I5 2752 aa1.17□□□□□ -2.22
GYPA-203ENST00000503627 KRTAP2-3P0C7H8 128 aa1.16□□□□□ -2.22
GYPA-203ENST00000503627 KRTAP2-4Q9BYR9 128 aa1.16□□□□□ -2.22
GYPA-203ENST00000503627 KRTAP2-1Q9BYU5 128 aa1.16□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms