RNA–Protein interactions for RNA: ENST00000503215.5

SCLT1-204, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 1,364 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-204ENST00000503215 NDUFA1O15239 70 aa9.98□□□□□ -0.81
SCLT1-204ENST00000503215 SMIM13P0DJ93 91 aa9.98□□□□□ -0.81
SCLT1-204ENST00000503215 TAL2Q16559 108 aa9.98□□□□□ -0.81
SCLT1-204ENST00000503215 MTURNQ8N3F0 131 aa9.98□□□□□ -0.81
SCLT1-204ENST00000503215 A0A087WZ39 114 aa9.97□□□□□ -0.81
SCLT1-204ENST00000503215 HBDP02042 147 aa9.97□□□□□ -0.81
SCLT1-204ENST00000503215 KRTAP7-1Q8IUC3 87 aa9.97□□□□□ -0.81
SCLT1-204ENST00000503215 Q8N8P6 123 aa9.97□□□□□ -0.81
SCLT1-204ENST00000503215 TMEM141Q96I45 108 aa9.97□□□□□ -0.81
SCLT1-204ENST00000503215 MAP1LC3AQ9H492 121 aa9.97□□□□□ -0.81
SCLT1-204ENST00000503215 SPCS1Q9Y6A9 102 aa9.97□□□□□ -0.81
SCLT1-204ENST00000503215 F8W1H4 67 aa9.96□□□□□ -0.82
SCLT1-204ENST00000503215 H3BUT2 72 aa9.96□□□□□ -0.82
SCLT1-204ENST00000503215 UBE2D1P51668 147 aa9.96□□□□□ -0.82
SCLT1-204ENST00000503215 REG3GQ6UW15 175 aa9.96□□□□□ -0.82
SCLT1-204ENST00000503215 C2orf82Q6UX34 121 aa9.96□□□□□ -0.82
SCLT1-204ENST00000503215 ERASQ7Z444 233 aa9.96□□□□□ -0.82
SCLT1-204ENST00000503215 A0A1B0GV72 72 aa9.95□□□□□ -0.82
SCLT1-204ENST00000503215 F8WDY8 70 aa9.95□□□□□ -0.82
SCLT1-204ENST00000503215 GAGE2EQ4V326 116 aa9.95□□□□□ -0.82
SCLT1-204ENST00000503215 C4orf48Q5BLP8 95 aa9.95□□□□□ -0.82
SCLT1-204ENST00000503215 C2orf66Q6UXQ4 117 aa9.95□□□□□ -0.82
SCLT1-204ENST00000503215 SIGMAR1Q99720 223 aa9.95□□□□□ -0.82
SCLT1-204ENST00000503215 GAGE2DQ9UEU5 116 aa9.95□□□□□ -0.82
SCLT1-204ENST00000503215 TLX1NBP0CAT3 122 aa9.94□□□□□ -0.82
SCLT1-204ENST00000503215 C1orf137Q5JT78 98 aa9.94□□□□□ -0.82
SCLT1-204ENST00000503215 IFI27L1Q96BM0 104 aa9.94□□□□□ -0.82
SCLT1-204ENST00000503215 LRP2P98164 4655 aa9.93□□□□□ -0.82
SCLT1-204ENST00000503215 SMCPP49901 116 aaPredicted RBP9.93□□□□□ -0.82
SCLT1-204ENST00000503215 FAM19A5Q7Z5A7 132 aaPredicted RBP9.93□□□□□ -0.82
SCLT1-204ENST00000503215 AMELXQ99217 191 aa9.93□□□□□ -0.82
SCLT1-204ENST00000503215 CYSLTR1Q9Y271 337 aa9.93□□□□□ -0.82
SCLT1-204ENST00000503215 IGIPA6NJ69 53 aa9.92□□□□□ -0.82
SCLT1-204ENST00000503215 ATP5LO75964 103 aa9.92□□□□□ -0.82
SCLT1-204ENST00000503215 A0A096LNJ9 63 aa9.91□□□□□ -0.82
SCLT1-204ENST00000503215 VCX2Q9H322 139 aa9.91□□□□□ -0.82
SCLT1-204ENST00000503215 NXT2Q9NPJ8 142 aaKnown RBP9.91□□□□□ -0.82
SCLT1-204ENST00000503215 C9orf129Q5T035 196 aaKnown RBP9.89□□□□□ -0.83
SCLT1-204ENST00000503215 E9PLD3 99 aa9.88□□□□□ -0.83
SCLT1-204ENST00000503215 IGLV7-43P04211 117 aa9.88□□□□□ -0.83
SCLT1-204ENST00000503215 ORMDL2Q53FV1 153 aa9.88□□□□□ -0.83
SCLT1-204ENST00000503215 TRBV30A0A0K0K1B3 111 aa9.88□□□□□ -0.83
SCLT1-204ENST00000503215 TMEM238LA0A1B0GVL6 79 aa9.88□□□□□ -0.83
SCLT1-204ENST00000503215 LINC01561Q8N1V8 128 aa9.88□□□□□ -0.83
SCLT1-204ENST00000503215 TOMM7Q9P0U1 55 aa9.88□□□□□ -0.83
SCLT1-204ENST00000503215 TP73-AS1Q9UF72 201 aa9.88□□□□□ -0.83
SCLT1-204ENST00000503215 H0Y8G0 127 aa9.87□□□□□ -0.83
SCLT1-204ENST00000503215 NDUFC2-KCTD14E9PQ53 114 aa9.86□□□□□ -0.83
SCLT1-204ENST00000503215 M0QXV9 152 aa9.86□□□□□ -0.83
SCLT1-204ENST00000503215 FAM19A3Q7Z5A8 133 aa9.86□□□□□ -0.83
SCLT1-204ENST00000503215 CEND1Q8N111 149 aa9.86□□□□□ -0.83
SCLT1-204ENST00000503215 CDKN2A-AS1Q9UH64 79 aa9.86□□□□□ -0.83
SCLT1-204ENST00000503215 K7EMI3 77 aa9.85□□□□□ -0.83
SCLT1-204ENST00000503215 IGKCP01834 107 aa9.85□□□□□ -0.83
SCLT1-204ENST00000503215 PRR26Q8N8Z3 221 aa9.85□□□□□ -0.83
SCLT1-204ENST00000503215 TOMM6Q96B49 74 aa9.85□□□□□ -0.83
SCLT1-204ENST00000503215 DPM2O94777 84 aa9.84□□□□□ -0.83
SCLT1-204ENST00000503215 RPL24P83731 157 aaKnown RBP9.84□□□□□ -0.83
SCLT1-204ENST00000503215 SPANXB1Q9NS25 103 aaPredicted RBP9.84□□□□□ -0.83
SCLT1-204ENST00000503215 A0A1B0GWB2 263 aa9.83□□□□□ -0.84
SCLT1-204ENST00000503215 PRSS2P07478 247 aa9.83□□□□□ -0.84
SCLT1-204ENST00000503215 NMUP48645 174 aa9.83□□□□□ -0.84
SCLT1-204ENST00000503215 C6orf226Q5I0X4 101 aa9.83□□□□□ -0.84
SCLT1-204ENST00000503215 DIRC1Q969H9 104 aa9.83□□□□□ -0.84
SCLT1-204ENST00000503215 CKS1BP61024 79 aa9.82□□□□□ -0.84
SCLT1-204ENST00000503215 Q8IZM0 81 aa9.82□□□□□ -0.84
SCLT1-204ENST00000503215 RAB37Q96AX2 223 aa9.82□□□□□ -0.84
SCLT1-204ENST00000503215 TIMM17AQ99595 171 aa9.82□□□□□ -0.84
SCLT1-204ENST00000503215 XAGE1AQ9HD64 81 aa9.82□□□□□ -0.84
SCLT1-204ENST00000503215 H0Y9J4 135 aa9.81□□□□□ -0.84
SCLT1-204ENST00000503215 PLNP26678 52 aa9.81□□□□□ -0.84
SCLT1-204ENST00000503215 UBE2BP63146 152 aa9.81□□□□□ -0.84
SCLT1-204ENST00000503215 LYRM7Q5U5X0 104 aa9.81□□□□□ -0.84
SCLT1-204ENST00000503215 PCP2Q8IVA1 136 aa9.81□□□□□ -0.84
SCLT1-204ENST00000503215 SCGB3A1Q96QR1 104 aa9.81□□□□□ -0.84
SCLT1-204ENST00000503215 GEMIN7Q9H840 131 aaKnown RBP9.81□□□□□ -0.84
SCLT1-204ENST00000503215 LINC01549A6NIU2 74 aa9.8□□□□□ -0.84
SCLT1-204ENST00000503215 KRTAP1-4P0C5Y4 121 aa9.8□□□□□ -0.84
SCLT1-204ENST00000503215 HERVK_113P63121 156 aa9.8□□□□□ -0.84
SCLT1-204ENST00000503215 TRAV12-1A0A0B4J245 112 aa9.79□□□□□ -0.84
SCLT1-204ENST00000503215 FXYD2P54710 66 aa9.79□□□□□ -0.84
SCLT1-204ENST00000503215 A6NJY4 79 aa9.78□□□□□ -0.84
SCLT1-204ENST00000503215 PAPPA-AS1Q5QFB9 102 aa9.78□□□□□ -0.84
SCLT1-204ENST00000503215 C22orf24Q9Y442 160 aa9.78□□□□□ -0.84
SCLT1-204ENST00000503215 SMIM1B2RUZ4 78 aa9.77□□□□□ -0.84
SCLT1-204ENST00000503215 H3BMG7 143 aa9.77□□□□□ -0.84
SCLT1-204ENST00000503215 F8VRH5 84 aa9.76□□□□□ -0.85
SCLT1-204ENST00000503215 NHP2Q9NX24 153 aaKnown RBP9.76□□□□□ -0.85
SCLT1-204ENST00000503215 RNF213Q63HN8 5207 aa9.76□□□□□ -0.85
SCLT1-204ENST00000503215 TINCRA0A1B0GVN0 87 aa9.75□□□□□ -0.85
SCLT1-204ENST00000503215 IGLV5-45A0A087WSX0 123 aa9.75□□□□□ -0.85
SCLT1-204ENST00000503215 PRO0461Q9UI25 63 aa9.75□□□□□ -0.85
SCLT1-204ENST00000503215 SPINK8P0C7L1 97 aa9.74□□□□□ -0.85
SCLT1-204ENST00000503215 COX7B2Q8TF08 81 aa9.74□□□□□ -0.85
SCLT1-204ENST00000503215 LPAP08519 4548 aa9.73□□□□□ -0.85
SCLT1-204ENST00000503215 IGKV2D-26A0A0A0MRZ7 120 aa9.73□□□□□ -0.85
SCLT1-204ENST00000503215 NAA38Q9BRA0 125 aaKnown RBP9.73□□□□□ -0.85
SCLT1-204ENST00000503215 TRBV20-1A0A075B6N2 111 aa9.72□□□□□ -0.85
SCLT1-204ENST00000503215 PMVKQ15126 192 aa9.72□□□□□ -0.85
SCLT1-204ENST00000503215 HIST1H4GQ99525 98 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms