RNA–Protein interactions for RNA: ENST00000497368.1

UBE3C-208, Transcript of ubiquitin protein ligase E3C, humanhuman

TSL 2

Gene UBE3C, Length 776 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3C-208ENST00000497368 RPL37AP8A6NKH3 93 aa3.18□□□□□ -1.9
UBE3C-208ENST00000497368 K7EMI3 77 aa3.18□□□□□ -1.9
UBE3C-208ENST00000497368 NUPR1O60356 82 aa3.18□□□□□ -1.9
UBE3C-208ENST00000497368 SNAPINO95295 136 aa3.18□□□□□ -1.9
UBE3C-208ENST00000497368 APOC3P02656 99 aa3.18□□□□□ -1.9
UBE3C-208ENST00000497368 MT-ND4LP03901 98 aa3.18□□□□□ -1.9
UBE3C-208ENST00000497368 VPREB1P12018 145 aa3.18□□□□□ -1.9
UBE3C-208ENST00000497368 SEC61BP60468 96 aaKnown RBP3.18□□□□□ -1.9
UBE3C-208ENST00000497368 HERVK_113P63121 156 aa3.18□□□□□ -1.9
UBE3C-208ENST00000497368 MRPL55Q7Z7F7 128 aaKnown RBP3.18□□□□□ -1.9
UBE3C-208ENST00000497368 SVBPQ8N300 66 aa3.18□□□□□ -1.9
UBE3C-208ENST00000497368 COX7B2Q8TF08 81 aa3.18□□□□□ -1.9
UBE3C-208ENST00000497368 PACRGQ96M98 296 aaPredicted RBP3.18□□□□□ -1.9
UBE3C-208ENST00000497368 C2orf88Q9BSF0 95 aa3.18□□□□□ -1.9
UBE3C-208ENST00000497368 VCX2Q9H322 139 aa3.18□□□□□ -1.9
UBE3C-208ENST00000497368 NXT2Q9NPJ8 142 aaKnown RBP3.18□□□□□ -1.9
UBE3C-208ENST00000497368 GAGE10A6NGK3 116 aa3.17□□□□□ -1.9
UBE3C-208ENST00000497368 IGLC3P0DOY3 106 aa3.17□□□□□ -1.9
UBE3C-208ENST00000497368 ZNF22P17026 224 aaPredicted RBP3.17□□□□□ -1.9
UBE3C-208ENST00000497368 PDZD11Q5EBL8 140 aa3.17□□□□□ -1.9
UBE3C-208ENST00000497368 ERASQ7Z444 233 aa3.17□□□□□ -1.9
UBE3C-208ENST00000497368 RETNLBQ9BQ08 111 aa3.17□□□□□ -1.9
UBE3C-208ENST00000497368 CST9LQ9H4G1 147 aa3.17□□□□□ -1.9
UBE3C-208ENST00000497368 RPS10P5Q9NQ39 176 aa3.17□□□□□ -1.9
UBE3C-208ENST00000497368 TRAV9-1A0A075B6T8 112 aa3.16□□□□□ -1.9
UBE3C-208ENST00000497368 TMEM238C9JI98 176 aa3.16□□□□□ -1.9
UBE3C-208ENST00000497368 M0R378 163 aa3.16□□□□□ -1.9
UBE3C-208ENST00000497368 TSPAN13O95857 204 aa3.16□□□□□ -1.9
UBE3C-208ENST00000497368 RPL13AP40429 203 aaKnown RBP3.16□□□□□ -1.9
UBE3C-208ENST00000497368 CXCL5P42830 114 aa3.16□□□□□ -1.9
UBE3C-208ENST00000497368 PRR4Q16378 134 aa3.16□□□□□ -1.9
UBE3C-208ENST00000497368 C3orf22Q8N5N4 141 aa3.16□□□□□ -1.9
UBE3C-208ENST00000497368 YPEL4Q96NS1 127 aa3.16□□□□□ -1.9
UBE3C-208ENST00000497368 IGKV2-28A0A075B6P5 120 aa3.15□□□□□ -1.91
UBE3C-208ENST00000497368 C11orf86A6NJI1 115 aa3.15□□□□□ -1.91
UBE3C-208ENST00000497368 ATP6V1G1O75348 118 aa3.15□□□□□ -1.91
UBE3C-208ENST00000497368 IGKV2D-28P01615 120 aa3.15□□□□□ -1.91
UBE3C-208ENST00000497368 CFC1BP0CG36 223 aa3.15□□□□□ -1.91
UBE3C-208ENST00000497368 CFC1P0CG37 223 aa3.15□□□□□ -1.91
UBE3C-208ENST00000497368 CKS1BP61024 79 aa3.15□□□□□ -1.91
UBE3C-208ENST00000497368 PRLHP81277 87 aa3.15□□□□□ -1.91
UBE3C-208ENST00000497368 PMCHL1Q16048 86 aa3.15□□□□□ -1.91
UBE3C-208ENST00000497368 C6orf226Q5I0X4 101 aa3.15□□□□□ -1.91
UBE3C-208ENST00000497368 C18orf32Q8TCD1 76 aa3.15□□□□□ -1.91
UBE3C-208ENST00000497368 ZNF625Q96I27 306 aaPredicted RBP3.15□□□□□ -1.91
UBE3C-208ENST00000497368 SCGB3A1Q96QR1 104 aa3.15□□□□□ -1.91
UBE3C-208ENST00000497368 GNB1LQ9BYB4 327 aa3.15□□□□□ -1.91
UBE3C-208ENST00000497368 KRTAP4-1Q9BYQ7 146 aa3.15□□□□□ -1.91
UBE3C-208ENST00000497368 GEMIN7Q9H840 131 aaKnown RBP3.15□□□□□ -1.91
UBE3C-208ENST00000497368 SND1-IT1Q9HBX3 110 aa3.15□□□□□ -1.91
UBE3C-208ENST00000497368 S100PP25815 95 aa3.14□□□□□ -1.91
UBE3C-208ENST00000497368 LINC01547P58512 204 aaPredicted RBP3.14□□□□□ -1.91
UBE3C-208ENST00000497368 PMVKQ15126 192 aa3.14□□□□□ -1.91
UBE3C-208ENST00000497368 LBHQ53QV2 105 aaPredicted RBP3.14□□□□□ -1.91
UBE3C-208ENST00000497368 CBLN2Q8IUK8 224 aa3.14□□□□□ -1.91
UBE3C-208ENST00000497368 TMEM126AQ9H061 195 aa3.14□□□□□ -1.91
UBE3C-208ENST00000497368 FLGP20930 4061 aaPredicted RBP3.14□□□□□ -1.91
UBE3C-208ENST00000497368 KRTAP4-16G5E9R7 235 aaPredicted RBP3.13□□□□□ -1.91
UBE3C-208ENST00000497368 S100A1P23297 94 aa3.13□□□□□ -1.91
UBE3C-208ENST00000497368 RPL28P46779 137 aaKnown RBP3.13□□□□□ -1.91
UBE3C-208ENST00000497368 RAB5BP61020 215 aa3.13□□□□□ -1.91
UBE3C-208ENST00000497368 SEC11AP67812 179 aa3.13□□□□□ -1.91
UBE3C-208ENST00000497368 FAM229BQ4G0N7 80 aa3.13□□□□□ -1.91
UBE3C-208ENST00000497368 TYMSOSQ8TAI1 123 aa3.13□□□□□ -1.91
UBE3C-208ENST00000497368 SMCO4Q9NRQ5 59 aa3.13□□□□□ -1.91
UBE3C-208ENST00000497368 ERG28Q9UKR5 140 aa3.13□□□□□ -1.91
UBE3C-208ENST00000497368 CRYGAP11844 174 aa3.12□□□□□ -1.91
UBE3C-208ENST00000497368 PFN2P35080 140 aa3.12□□□□□ -1.91
UBE3C-208ENST00000497368 SPRR1AP35321 89 aa3.12□□□□□ -1.91
UBE3C-208ENST00000497368 TSPEAR-AS2P59090 65 aa3.12□□□□□ -1.91
UBE3C-208ENST00000497368 TPRXLQ17RH7 258 aa3.12□□□□□ -1.91
UBE3C-208ENST00000497368 COX19Q49B96 90 aa3.12□□□□□ -1.91
UBE3C-208ENST00000497368 LINC00304Q8N9R0 145 aa3.12□□□□□ -1.91
UBE3C-208ENST00000497368 PLEKHB2Q96CS7 222 aa3.12□□□□□ -1.91
UBE3C-208ENST00000497368 TMEM223A0PJW6 202 aa3.11□□□□□ -1.91
UBE3C-208ENST00000497368 COLCA2A8K830 154 aa3.11□□□□□ -1.91
UBE3C-208ENST00000497368 HBDP02042 147 aa3.11□□□□□ -1.91
UBE3C-208ENST00000497368 FA2HQ7L5A8 372 aa3.11□□□□□ -1.91
UBE3C-208ENST00000497368 SPRR4Q96PI1 79 aa3.11□□□□□ -1.91
UBE3C-208ENST00000497368 UBE2AP49459 152 aa3.1□□□□□ -1.91
UBE3C-208ENST00000497368 FABP9Q0Z7S8 132 aa3.1□□□□□ -1.91
UBE3C-208ENST00000497368 KRTAP19-2Q3LHN2 52 aa3.1□□□□□ -1.91
UBE3C-208ENST00000497368 KRTAP13-3Q3SY46 172 aa3.1□□□□□ -1.91
UBE3C-208ENST00000497368 FAM19A1Q7Z5A9 133 aa3.1□□□□□ -1.91
UBE3C-208ENST00000497368 NKAPP1Q8N9T2 125 aa3.1□□□□□ -1.91
UBE3C-208ENST00000497368 SMCR5Q8TEV8 140 aa3.1□□□□□ -1.91
UBE3C-208ENST00000497368 TRAPPC1Q9Y5R8 145 aa3.1□□□□□ -1.91
UBE3C-208ENST00000497368 LINC01549A6NIU2 74 aa3.09□□□□□ -1.91
UBE3C-208ENST00000497368 ATP5LO75964 103 aa3.09□□□□□ -1.91
UBE3C-208ENST00000497368 ERC2-IT1O76042 136 aa3.09□□□□□ -1.91
UBE3C-208ENST00000497368 LINC00614P0C842 121 aa3.09□□□□□ -1.91
UBE3C-208ENST00000497368 G0S2P27469 103 aa3.09□□□□□ -1.91
UBE3C-208ENST00000497368 LCE1FQ5T754 118 aa3.09□□□□□ -1.91
UBE3C-208ENST00000497368 TRAV12-1A0A0B4J245 112 aa3.08□□□□□ -1.92
UBE3C-208ENST00000497368 A0A0U1RRA0 63 aa3.08□□□□□ -1.92
UBE3C-208ENST00000497368 H3BRM9 83 aa3.08□□□□□ -1.92
UBE3C-208ENST00000497368 NCR3O14931 201 aa3.08□□□□□ -1.92
UBE3C-208ENST00000497368 TRGC2P03986 189 aa3.08□□□□□ -1.92
UBE3C-208ENST00000497368 SMIM13P0DJ93 91 aa3.08□□□□□ -1.92
UBE3C-208ENST00000497368 COX17Q14061 63 aa3.08□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 87.7 ms