RNA–Protein interactions for RNA: ENST00000493271.1

SNRNP200-207, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

TSL 3

Gene SNRNP200, Length 585 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-207ENST00000493271 FAM229BQ4G0N7 80 aa6.44□□□□□ -1.38
SNRNP200-207ENST00000493271 C6orf226Q5I0X4 101 aa6.44□□□□□ -1.38
SNRNP200-207ENST00000493271 PET117Q6UWS5 81 aa6.44□□□□□ -1.38
SNRNP200-207ENST00000493271 Q8N8P6 123 aa6.44□□□□□ -1.38
SNRNP200-207ENST00000493271 LINC00587B1AMM8 73 aa6.43□□□□□ -1.38
SNRNP200-207ENST00000493271 SYS1-DBNDD2H3BUS1 97 aa6.43□□□□□ -1.38
SNRNP200-207ENST00000493271 K7EMI3 77 aa6.43□□□□□ -1.38
SNRNP200-207ENST00000493271 CXCL5P42830 114 aa6.43□□□□□ -1.38
SNRNP200-207ENST00000493271 SEC11AP67812 179 aa6.43□□□□□ -1.38
SNRNP200-207ENST00000493271 PRO1933Q9H354 126 aa6.43□□□□□ -1.38
SNRNP200-207ENST00000493271 F8VRH5 84 aa6.42□□□□□ -1.38
SNRNP200-207ENST00000493271 FAM19A3Q7Z5A8 133 aa6.42□□□□□ -1.38
SNRNP200-207ENST00000493271 LINC00304Q8N9R0 145 aa6.42□□□□□ -1.38
SNRNP200-207ENST00000493271 XAGE1AQ9HD64 81 aa6.42□□□□□ -1.38
SNRNP200-207ENST00000493271 TOMM7Q9P0U1 55 aa6.42□□□□□ -1.38
SNRNP200-207ENST00000493271 HERVK_113P63121 156 aa6.41□□□□□ -1.38
SNRNP200-207ENST00000493271 LINC00469Q8N7U9 141 aa6.41□□□□□ -1.38
SNRNP200-207ENST00000493271 VCX2Q9H322 139 aa6.41□□□□□ -1.38
SNRNP200-207ENST00000493271 CYSLTR1Q9Y271 337 aa6.41□□□□□ -1.38
SNRNP200-207ENST00000493271 PAM16Q9Y3D7 125 aa6.41□□□□□ -1.38
SNRNP200-207ENST00000493271 A0A096LNJ9 63 aa6.4□□□□□ -1.38
SNRNP200-207ENST00000493271 LINC01549A6NIU2 74 aa6.4□□□□□ -1.38
SNRNP200-207ENST00000493271 HSBP1L1C9JCN9 74 aa6.4□□□□□ -1.38
SNRNP200-207ENST00000493271 ATP5LO75964 103 aa6.4□□□□□ -1.38
SNRNP200-207ENST00000493271 G0S2P27469 103 aa6.4□□□□□ -1.38
SNRNP200-207ENST00000493271 SPATA45Q537H7 98 aa6.4□□□□□ -1.38
SNRNP200-207ENST00000493271 ORMDL2Q53FV1 153 aa6.4□□□□□ -1.38
SNRNP200-207ENST00000493271 PAPPA-AS1Q5QFB9 102 aa6.4□□□□□ -1.38
SNRNP200-207ENST00000493271 LINC01545Q5VT33 79 aa6.4□□□□□ -1.38
SNRNP200-207ENST00000493271 LINC00173Q6ZV60 143 aa6.4□□□□□ -1.38
SNRNP200-207ENST00000493271 AMELXQ99217 191 aa6.4□□□□□ -1.38
SNRNP200-207ENST00000493271 IGLV7-46A0A075B6I9 117 aa6.39□□□□□ -1.39
SNRNP200-207ENST00000493271 UBE2AP49459 152 aa6.39□□□□□ -1.39
SNRNP200-207ENST00000493271 C2orf66Q6UXQ4 117 aa6.39□□□□□ -1.39
SNRNP200-207ENST00000493271 IFI27L1Q96BM0 104 aa6.39□□□□□ -1.39
SNRNP200-207ENST00000493271 IGKV2D-26A0A0A0MRZ7 120 aa6.38□□□□□ -1.39
SNRNP200-207ENST00000493271 KRTAP13-2Q52LG2 175 aa6.38□□□□□ -1.39
SNRNP200-207ENST00000493271 KRTAP13-1Q8IUC0 172 aa6.38□□□□□ -1.39
SNRNP200-207ENST00000493271 LINC00167Q96N53 147 aa6.38□□□□□ -1.39
SNRNP200-207ENST00000493271 RETNLBQ9BQ08 111 aa6.38□□□□□ -1.39
SNRNP200-207ENST00000493271 MIEN1Q9BRT3 115 aa6.38□□□□□ -1.39
SNRNP200-207ENST00000493271 UQCR10Q9UDW1 63 aa6.38□□□□□ -1.39
SNRNP200-207ENST00000493271 IGLV5-37A0A075B6J1 123 aa6.37□□□□□ -1.39
SNRNP200-207ENST00000493271 H0Y8G0 127 aa6.37□□□□□ -1.39
SNRNP200-207ENST00000493271 ATOH7Q8N100 152 aa6.37□□□□□ -1.39
SNRNP200-207ENST00000493271 GEMIN7Q9H840 131 aaKnown RBP6.37□□□□□ -1.39
SNRNP200-207ENST00000493271 RPL37AP8A6NKH3 93 aa6.36□□□□□ -1.39
SNRNP200-207ENST00000493271 NKAPP1Q8N9T2 125 aa6.36□□□□□ -1.39
SNRNP200-207ENST00000493271 CDKN2A-AS1Q9UH64 79 aa6.36□□□□□ -1.39
SNRNP200-207ENST00000493271 IGIPA6NJ69 53 aa6.35□□□□□ -1.39
SNRNP200-207ENST00000493271 IGLC3P0DOY3 106 aa6.35□□□□□ -1.39
SNRNP200-207ENST00000493271 SPAG11AQ6PDA7 123 aa6.35□□□□□ -1.39
SNRNP200-207ENST00000493271 C14orf144Q96I85 54 aa6.35□□□□□ -1.39
SNRNP200-207ENST00000493271 ANAPC11Q9NYG5 84 aa6.35□□□□□ -1.39
SNRNP200-207ENST00000493271 FP248Q71RG6 208 aaPredicted RBP6.34□□□□□ -1.39
SNRNP200-207ENST00000493271 TOMM6Q96B49 74 aa6.34□□□□□ -1.39
SNRNP200-207ENST00000493271 TIMM17AQ99595 171 aa6.34□□□□□ -1.39
SNRNP200-207ENST00000493271 PMCHL2Q9BQD1 86 aa6.34□□□□□ -1.39
SNRNP200-207ENST00000493271 PPDPFQ9H3Y8 114 aa6.34□□□□□ -1.39
SNRNP200-207ENST00000493271 M0R143 59 aa6.33□□□□□ -1.4
SNRNP200-207ENST00000493271 ZC2HC1BQ5TFG8 222 aa6.33□□□□□ -1.4
SNRNP200-207ENST00000493271 SCGB3A1Q96QR1 104 aa6.33□□□□□ -1.4
SNRNP200-207ENST00000493271 TRAV12-1A0A0B4J245 112 aa6.32□□□□□ -1.4
SNRNP200-207ENST00000493271 GAGE10A6NGK3 116 aa6.32□□□□□ -1.4
SNRNP200-207ENST00000493271 DPM2O94777 84 aa6.32□□□□□ -1.4
SNRNP200-207ENST00000493271 LINC01547P58512 204 aaPredicted RBP6.32□□□□□ -1.4
SNRNP200-207ENST00000493271 LCE2CQ5TA81 110 aa6.32□□□□□ -1.4
SNRNP200-207ENST00000493271 SLC25A34Q6PIV7 304 aa6.32□□□□□ -1.4
SNRNP200-207ENST00000493271 COX7B2Q8TF08 81 aa6.32□□□□□ -1.4
SNRNP200-207ENST00000493271 SMIM1B2RUZ4 78 aa6.31□□□□□ -1.4
SNRNP200-207ENST00000493271 PLNP26678 52 aa6.31□□□□□ -1.4
SNRNP200-207ENST00000493271 ERASQ7Z444 233 aa6.31□□□□□ -1.4
SNRNP200-207ENST00000493271 IGLV5-45A0A087WSX0 123 aa6.3□□□□□ -1.4
SNRNP200-207ENST00000493271 TINCRA0A1B0GVN0 87 aa6.3□□□□□ -1.4
SNRNP200-207ENST00000493271 IGKCP01834 107 aa6.3□□□□□ -1.4
SNRNP200-207ENST00000493271 LINC00337Q8N6G1 96 aa6.3□□□□□ -1.4
SNRNP200-207ENST00000493271 IGKV2-28A0A075B6P5 120 aa6.29□□□□□ -1.4
SNRNP200-207ENST00000493271 IGKV2D-28P01615 120 aa6.29□□□□□ -1.4
SNRNP200-207ENST00000493271 COX8AP10176 69 aa6.29□□□□□ -1.4
SNRNP200-207ENST00000493271 ASB16-AS1Q495Z4 193 aa6.29□□□□□ -1.4
SNRNP200-207ENST00000493271 FAM19A1Q7Z5A9 133 aa6.29□□□□□ -1.4
SNRNP200-207ENST00000493271 TMEM126AQ9H061 195 aa6.29□□□□□ -1.4
SNRNP200-207ENST00000493271 DLEU1O43261 78 aa6.28□□□□□ -1.4
SNRNP200-207ENST00000493271 PRLHP81277 87 aa6.28□□□□□ -1.4
SNRNP200-207ENST00000493271 RPL24P83731 157 aaKnown RBP6.28□□□□□ -1.4
SNRNP200-207ENST00000493271 C4orf48Q5BLP8 95 aa6.28□□□□□ -1.4
SNRNP200-207ENST00000493271 PLEKHB2Q96CS7 222 aa6.28□□□□□ -1.4
SNRNP200-207ENST00000493271 SNHG12Q9BXW3 62 aa6.28□□□□□ -1.4
SNRNP200-207ENST00000493271 CHTOPQ9Y3Y2 248 aaKnown RBP6.28□□□□□ -1.4
SNRNP200-207ENST00000493271 ANKRD39Q53RE8 183 aa6.27□□□□□ -1.41
SNRNP200-207ENST00000493271 H3BRM9 83 aa6.26□□□□□ -1.41
SNRNP200-207ENST00000493271 SEC61BP60468 96 aaKnown RBP6.26□□□□□ -1.41
SNRNP200-207ENST00000493271 COX17Q14061 63 aa6.26□□□□□ -1.41
SNRNP200-207ENST00000493271 PMVKQ15126 192 aa6.26□□□□□ -1.41
SNRNP200-207ENST00000493271 ZNF706Q9Y5V0 76 aaPredicted RBP6.26□□□□□ -1.41
SNRNP200-207ENST00000493271 M0R378 163 aa6.25□□□□□ -1.41
SNRNP200-207ENST00000493271 VPREB1P12018 145 aa6.25□□□□□ -1.41
SNRNP200-207ENST00000493271 NMUP48645 174 aa6.25□□□□□ -1.41
SNRNP200-207ENST00000493271 HERVK_113P61574 105 aa6.25□□□□□ -1.41
SNRNP200-207ENST00000493271 KRTAP13-3Q3SY46 172 aa6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms