RNA–Protein interactions for RNA: ENST00000488627.5

CTDSP1-209, Transcript of CTD small phosphatase 1, humanhuman

TSL 3

Gene CTDSP1, Length 1,118 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-209ENST00000488627 GAGE10A6NGK3 116 aa9.62□□□□□ -0.87
CTDSP1-209ENST00000488627 ZNF861PO60384 105 aa9.62□□□□□ -0.87
CTDSP1-209ENST00000488627 KRTAP1-4P0C5Y4 121 aa9.61□□□□□ -0.87
CTDSP1-209ENST00000488627 NKAPP1Q8N9T2 125 aa9.6□□□□□ -0.87
CTDSP1-209ENST00000488627 BCE1O60756 84 aa9.59□□□□□ -0.87
CTDSP1-209ENST00000488627 PLNP26678 52 aa9.59□□□□□ -0.87
CTDSP1-209ENST00000488627 LINC00158P58513 81 aa9.59□□□□□ -0.87
CTDSP1-209ENST00000488627 TSPEAR-AS2P59090 65 aa9.59□□□□□ -0.87
CTDSP1-209ENST00000488627 PMCHL2Q9BQD1 86 aa9.59□□□□□ -0.87
CTDSP1-209ENST00000488627 DPM2O94777 84 aa9.58□□□□□ -0.88
CTDSP1-209ENST00000488627 PRR26Q8N8Z3 221 aa9.58□□□□□ -0.88
CTDSP1-209ENST00000488627 NDUFA12Q9UI09 145 aa9.58□□□□□ -0.88
CTDSP1-209ENST00000488627 IGLV1-50A0A075B6I6 118 aa9.57□□□□□ -0.88
CTDSP1-209ENST00000488627 A0A0U1RRA0 63 aa9.57□□□□□ -0.88
CTDSP1-209ENST00000488627 SMIM13P0DJ93 91 aa9.57□□□□□ -0.88
CTDSP1-209ENST00000488627 HERV-K104P63124 156 aa9.57□□□□□ -0.88
CTDSP1-209ENST00000488627 MAP1LC3CQ9BXW4 147 aa9.57□□□□□ -0.88
CTDSP1-209ENST00000488627 LEPROTO15243 131 aa9.56□□□□□ -0.88
CTDSP1-209ENST00000488627 IGKCP01834 107 aa9.56□□□□□ -0.88
CTDSP1-209ENST00000488627 RPL24P83731 157 aaKnown RBP9.56□□□□□ -0.88
CTDSP1-209ENST00000488627 KRTAP13-1Q8IUC0 172 aa9.56□□□□□ -0.88
CTDSP1-209ENST00000488627 IGKV2-28A0A075B6P5 120 aa9.55□□□□□ -0.88
CTDSP1-209ENST00000488627 IGKV2D-28P01615 120 aa9.55□□□□□ -0.88
CTDSP1-209ENST00000488627 PLEKHB2Q96CS7 222 aa9.55□□□□□ -0.88
CTDSP1-209ENST00000488627 MYMXA0A1B0GTQ4 84 aa9.54□□□□□ -0.88
CTDSP1-209ENST00000488627 RPL28P46779 137 aaKnown RBP9.54□□□□□ -0.88
CTDSP1-209ENST00000488627 COA6Q5JTJ3 125 aaKnown RBP9.54□□□□□ -0.88
CTDSP1-209ENST00000488627 MIR7-3HGQ8N6C7 128 aa9.54□□□□□ -0.88
CTDSP1-209ENST00000488627 SYS1-DBNDD2H3BUS1 97 aa9.53□□□□□ -0.88
CTDSP1-209ENST00000488627 J3QQQ9 107 aa9.53□□□□□ -0.88
CTDSP1-209ENST00000488627 MEIG1Q5JSS6 88 aa9.53□□□□□ -0.88
CTDSP1-209ENST00000488627 LINC00587B1AMM8 73 aa9.52□□□□□ -0.89
CTDSP1-209ENST00000488627 TMEM238C9JI98 176 aa9.51□□□□□ -0.89
CTDSP1-209ENST00000488627 M0R378 163 aa9.51□□□□□ -0.89
CTDSP1-209ENST00000488627 HERVK_113P61574 105 aa9.51□□□□□ -0.89
CTDSP1-209ENST00000488627 ATP6V1G1O75348 118 aa9.5□□□□□ -0.89
CTDSP1-209ENST00000488627 LINC01545Q5VT33 79 aa9.5□□□□□ -0.89
CTDSP1-209ENST00000488627 BOD1L2Q8IYS8 172 aa9.5□□□□□ -0.89
CTDSP1-209ENST00000488627 TMEM126AQ9H061 195 aa9.5□□□□□ -0.89
CTDSP1-209ENST00000488627 LOC107984156A0A0G2JMH3 177 aa9.49□□□□□ -0.89
CTDSP1-209ENST00000488627 NMUP48645 174 aa9.49□□□□□ -0.89
CTDSP1-209ENST00000488627 ARL17AQ8IVW1 177 aa9.49□□□□□ -0.89
CTDSP1-209ENST00000488627 E9PLD3 99 aa9.48□□□□□ -0.89
CTDSP1-209ENST00000488627 LGALS3P17931 250 aaKnown RBP9.48□□□□□ -0.89
CTDSP1-209ENST00000488627 UBE2AP49459 152 aa9.48□□□□□ -0.89
CTDSP1-209ENST00000488627 PET117Q6UWS5 81 aa9.48□□□□□ -0.89
CTDSP1-209ENST00000488627 DAND5Q8N907 189 aa9.47□□□□□ -0.89
CTDSP1-209ENST00000488627 C3orf79P0CE67 100 aa9.46□□□□□ -0.9
CTDSP1-209ENST00000488627 PRLHP81277 87 aa9.46□□□□□ -0.9
CTDSP1-209ENST00000488627 A0A087X002 238 aa9.45□□□□□ -0.9
CTDSP1-209ENST00000488627 IGKV2D-26A0A0A0MRZ7 120 aa9.45□□□□□ -0.9
CTDSP1-209ENST00000488627 RPL13AP40429 203 aaKnown RBP9.45□□□□□ -0.9
CTDSP1-209ENST00000488627 FAM19A1Q7Z5A9 133 aa9.45□□□□□ -0.9
CTDSP1-209ENST00000488627 A0A0J9YXY3 114 aa9.44□□□□□ -0.9
CTDSP1-209ENST00000488627 NCR3O14931 201 aa9.44□□□□□ -0.9
CTDSP1-209ENST00000488627 ANAPC11Q9NYG5 84 aa9.44□□□□□ -0.9
CTDSP1-209ENST00000488627 ADAMTSL4-AS1Q5T5F5 129 aa9.43□□□□□ -0.9
CTDSP1-209ENST00000488627 KCNQ1DNQ9H478 68 aa9.43□□□□□ -0.9
CTDSP1-209ENST00000488627 LRP2P98164 4655 aa9.43□□□□□ -0.9
CTDSP1-209ENST00000488627 EIF4EBP3O60516 100 aaPredicted RBP9.42□□□□□ -0.9
CTDSP1-209ENST00000488627 S100A1P23297 94 aa9.42□□□□□ -0.9
CTDSP1-209ENST00000488627 SPRR1AP35321 89 aa9.42□□□□□ -0.9
CTDSP1-209ENST00000488627 TRBV10-3A0A0K0K1G6 114 aa9.41□□□□□ -0.9
CTDSP1-209ENST00000488627 KRTAP4-16G5E9R7 235 aaPredicted RBP9.41□□□□□ -0.9
CTDSP1-209ENST00000488627 SOSTDC1Q6X4U4 206 aa9.41□□□□□ -0.9
CTDSP1-209ENST00000488627 UBR4Q5T4S7 5183 aa9.41□□□□□ -0.9
CTDSP1-209ENST00000488627 PRYO14603 147 aa9.4□□□□□ -0.9
CTDSP1-209ENST00000488627 CRYGAP11844 174 aa9.4□□□□□ -0.9
CTDSP1-209ENST00000488627 KRTDAPP60985 99 aa9.4□□□□□ -0.9
CTDSP1-209ENST00000488627 LITAFQ99732 161 aa9.4□□□□□ -0.9
CTDSP1-209ENST00000488627 TRBV10-2A0A0K0K1G8 114 aa9.39□□□□□ -0.91
CTDSP1-209ENST00000488627 KRTAP13-2Q52LG2 175 aa9.39□□□□□ -0.91
CTDSP1-209ENST00000488627 NDUFC2O95298 119 aa9.38□□□□□ -0.91
CTDSP1-209ENST00000488627 FAM229BQ4G0N7 80 aa9.38□□□□□ -0.91
CTDSP1-209ENST00000488627 LINC00337Q8N6G1 96 aa9.38□□□□□ -0.91
CTDSP1-209ENST00000488627 TTTY13Q9BZ97 58 aa9.38□□□□□ -0.91
CTDSP1-209ENST00000488627 TYMSOSQ8TAI1 123 aa9.36□□□□□ -0.91
CTDSP1-209ENST00000488627 MIEN1Q9BRT3 115 aa9.36□□□□□ -0.91
CTDSP1-209ENST00000488627 HIGD2AQ9BW72 106 aa9.36□□□□□ -0.91
CTDSP1-209ENST00000488627 SPANXB1Q9NS25 103 aaPredicted RBP9.36□□□□□ -0.91
CTDSP1-209ENST00000488627 TIMM17BO60830 172 aa9.35□□□□□ -0.91
CTDSP1-209ENST00000488627 IGLV6-57P01721 117 aa9.35□□□□□ -0.91
CTDSP1-209ENST00000488627 DDTP30046 118 aa9.35□□□□□ -0.91
CTDSP1-209ENST00000488627 NPC2P61916 151 aa9.35□□□□□ -0.91
CTDSP1-209ENST00000488627 ZNF815PA8K554 130 aa9.34□□□□□ -0.91
CTDSP1-209ENST00000488627 C20orf202A1L168 122 aa9.33□□□□□ -0.92
CTDSP1-209ENST00000488627 ANKRD39Q53RE8 183 aa9.33□□□□□ -0.92
CTDSP1-209ENST00000488627 HIST3H2BBQ8N257 126 aa9.33□□□□□ -0.92
CTDSP1-209ENST00000488627 LINC00308Q8TCZ7 52 aa9.33□□□□□ -0.92
CTDSP1-209ENST00000488627 B5MCH6 92 aa9.32□□□□□ -0.92
CTDSP1-209ENST00000488627 ATOH7Q8N100 152 aa9.32□□□□□ -0.92
CTDSP1-209ENST00000488627 SPRR4Q96PI1 79 aa9.32□□□□□ -0.92
CTDSP1-209ENST00000488627 ETDCA0A1B0GVM5 59 aa9.31□□□□□ -0.92
CTDSP1-209ENST00000488627 SMCR5Q8TEV8 140 aa9.31□□□□□ -0.92
CTDSP1-209ENST00000488627 HIST1H2BLQ99880 126 aa9.31□□□□□ -0.92
CTDSP1-209ENST00000488627 TSPAN13O95857 204 aa9.29□□□□□ -0.92
CTDSP1-209ENST00000488627 S100A12P80511 92 aa9.29□□□□□ -0.92
CTDSP1-209ENST00000488627 S100A7L2Q5SY68 101 aa9.29□□□□□ -0.92
CTDSP1-209ENST00000488627 ERC2-IT1O76042 136 aa9.28□□□□□ -0.92
CTDSP1-209ENST00000488627 C3orf22Q8N5N4 141 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms