RNA–Protein interactions for RNA: ENST00000488249.1

RBM28-207, Transcript of RNA binding motif protein 28, humanhuman

TSL 3

Gene RBM28, Length 570 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM28-207ENST00000488249 COA5Q86WW8 74 aa1.49□□□□□ -2.17
RBM28-207ENST00000488249 KRTAP13-1Q8IUC0 172 aa1.49□□□□□ -2.17
RBM28-207ENST00000488249 WFDC9Q8NEX5 89 aa1.49□□□□□ -2.17
RBM28-207ENST00000488249 SMIM4Q8WVI0 70 aa1.49□□□□□ -2.17
RBM28-207ENST00000488249 FN1P02751 2386 aaKnown RBP1.48□□□□□ -2.17
RBM28-207ENST00000488249 TRBV6-1A0A0K0K1D8 114 aa1.48□□□□□ -2.17
RBM28-207ENST00000488249 ACYP2P14621 99 aa1.48□□□□□ -2.17
RBM28-207ENST00000488249 ENHOQ6UWT2 76 aa1.48□□□□□ -2.17
RBM28-207ENST00000488249 BRD3OSQ6XYD6 125 aa1.48□□□□□ -2.17
RBM28-207ENST00000488249 ZCCHC13Q8WW36 166 aaKnown RBP1.48□□□□□ -2.17
RBM28-207ENST00000488249 TXNDC17Q9BRA2 123 aa1.48□□□□□ -2.17
RBM28-207ENST00000488249 ABRACLQ9P1F3 81 aa1.48□□□□□ -2.17
RBM28-207ENST00000488249 MED13LQ71F56 2210 aa1.48□□□□□ -2.17
RBM28-207ENST00000488249 DDX60LQ5H9U9 1706 aaKnown RBP1.47□□□□□ -2.17
RBM28-207ENST00000488249 DEFB112Q30KQ8 113 aa1.47□□□□□ -2.17
RBM28-207ENST00000488249 Q6ZRN7 208 aaPredicted RBP1.47□□□□□ -2.17
RBM28-207ENST00000488249 GAFA1Q96PS6 74 aa1.47□□□□□ -2.17
RBM28-207ENST00000488249 IGKV2-24A0A0C4DH68 120 aa1.46□□□□□ -2.18
RBM28-207ENST00000488249 LINC00959A0A1B0GUT2 108 aa1.46□□□□□ -2.18
RBM28-207ENST00000488249 SNRPGP62308 76 aaKnown RBP1.46□□□□□ -2.18
RBM28-207ENST00000488249 OBSCN-AS1Q96MR7 158 aa1.46□□□□□ -2.18
RBM28-207ENST00000488249 ZFHX3Q15911 3703 aa1.46□□□□□ -2.18
RBM28-207ENST00000488249 TRIOBPQ9H2D6 2365 aa1.45□□□□□ -2.18
RBM28-207ENST00000488249 CAV3P56539 151 aa1.45□□□□□ -2.18
RBM28-207ENST00000488249 CCL19Q99731 98 aa1.45□□□□□ -2.18
RBM28-207ENST00000488249 UBL5Q9BZL1 73 aa1.45□□□□□ -2.18
RBM28-207ENST00000488249 LRRC37A2A6NM11 1700 aa1.44□□□□□ -2.18
RBM28-207ENST00000488249 A0A1B0GU69 56 aa1.44□□□□□ -2.18
RBM28-207ENST00000488249 Q6ZQY7 126 aa1.44□□□□□ -2.18
RBM28-207ENST00000488249 IQGAP1P46940 1657 aa1.44□□□□□ -2.18
RBM28-207ENST00000488249 ABCA1O95477 2261 aa1.43□□□□□ -2.18
RBM28-207ENST00000488249 CACNA1CQ13936 2221 aa1.43□□□□□ -2.18
RBM28-207ENST00000488249 KMT2BQ9UMN6 2715 aaPredicted RBP1.43□□□□□ -2.18
RBM28-207ENST00000488249 NDUFA4O00483 81 aa1.43□□□□□ -2.18
RBM28-207ENST00000488249 F5P12259 2224 aa1.43□□□□□ -2.18
RBM28-207ENST00000488249 G3V318 75 aa1.42□□□□□ -2.18
RBM28-207ENST00000488249 DEPDC5O75140 1603 aa1.41□□□□□ -2.18
RBM28-207ENST00000488249 SMIM27A0A1W2PRY6 76 aa1.41□□□□□ -2.18
RBM28-207ENST00000488249 M0R1W7 72 aa1.41□□□□□ -2.18
RBM28-207ENST00000488249 ARL14EPLP0DKL9 152 aa1.41□□□□□ -2.18
RBM28-207ENST00000488249 COX7BP24311 80 aa1.41□□□□□ -2.18
RBM28-207ENST00000488249 PLNP26678 52 aa1.41□□□□□ -2.18
RBM28-207ENST00000488249 KRTAP12-3P60328 96 aa1.41□□□□□ -2.18
RBM28-207ENST00000488249 SERF2P84101 59 aa1.41□□□□□ -2.18
RBM28-207ENST00000488249 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa1.41□□□□□ -2.18
RBM28-207ENST00000488249 QSER1Q2KHR3 1735 aa1.4□□□□□ -2.18
RBM28-207ENST00000488249 SSC5DA1L4H1 1573 aa1.4□□□□□ -2.19
RBM28-207ENST00000488249 GVQW2A0A096LPI5 108 aaPredicted RBP1.4□□□□□ -2.19
RBM28-207ENST00000488249 IGIPA6NJ69 53 aa1.4□□□□□ -2.19
RBM28-207ENST00000488249 NCR3O14931 201 aa1.4□□□□□ -2.19
RBM28-207ENST00000488249 KRTAP12-4P60329 112 aa1.4□□□□□ -2.19
RBM28-207ENST00000488249 Q6ZRX8 168 aa1.4□□□□□ -2.19
RBM28-207ENST00000488249 SMIM11BQ8TCY0 68 aa1.4□□□□□ -2.19
RBM28-207ENST00000488249 TULP4Q9NRJ4 1543 aa1.4□□□□□ -2.19
RBM28-207ENST00000488249 A0A096LNT2 108 aa1.39□□□□□ -2.19
RBM28-207ENST00000488249 I3L3M4 83 aa1.39□□□□□ -2.19
RBM28-207ENST00000488249 COX6B1P14854 86 aa1.39□□□□□ -2.19
RBM28-207ENST00000488249 HAMPP81172 84 aa1.39□□□□□ -2.19
RBM28-207ENST00000488249 C10orf99Q6UWK7 81 aa1.39□□□□□ -2.19
RBM28-207ENST00000488249 SSBP3-AS1Q7Z2R9 100 aa1.39□□□□□ -2.19
RBM28-207ENST00000488249 PLAC4Q8WY50 150 aa1.39□□□□□ -2.19
RBM28-207ENST00000488249 ICE1Q9Y2F5 2266 aa1.39□□□□□ -2.19
RBM28-207ENST00000488249 A0A0G2JMZ2 1700 aa1.39□□□□□ -2.19
RBM28-207ENST00000488249 TOGARAM1Q9Y4F4 1720 aa1.39□□□□□ -2.19
RBM28-207ENST00000488249 FBN1P35555 2871 aaKnown RBP1.38□□□□□ -2.19
RBM28-207ENST00000488249 PLXNB2O15031 1838 aa1.38□□□□□ -2.19
RBM28-207ENST00000488249 CADP27708 2225 aa1.38□□□□□ -2.19
RBM28-207ENST00000488249 RPL38P63173 70 aaKnown RBP1.38□□□□□ -2.19
RBM28-207ENST00000488249 TNCP24821 2201 aa1.38□□□□□ -2.19
RBM28-207ENST00000488249 DDX60Q8IY21 1712 aaKnown RBP1.37□□□□□ -2.19
RBM28-207ENST00000488249 LY6G6CO95867 125 aa1.37□□□□□ -2.19
RBM28-207ENST00000488249 DEFB114Q30KQ6 69 aa1.37□□□□□ -2.19
RBM28-207ENST00000488249 KRTAP6-3Q3LI67 103 aa1.37□□□□□ -2.19
RBM28-207ENST00000488249 KCNQ1DNQ9H478 68 aa1.37□□□□□ -2.19
RBM28-207ENST00000488249 LRRC37AA6NMS7 1700 aa1.37□□□□□ -2.19
RBM28-207ENST00000488249 C4AP0C0L4 1744 aa1.37□□□□□ -2.19
RBM28-207ENST00000488249 C4BP0C0L5 1744 aa1.37□□□□□ -2.19
RBM28-207ENST00000488249 LMO7Q8WWI1 1683 aa1.36□□□□□ -2.19
RBM28-207ENST00000488249 ETDCA0A1B0GVM5 59 aa1.36□□□□□ -2.19
RBM28-207ENST00000488249 LINC01546A6NGU7 62 aa1.36□□□□□ -2.19
RBM28-207ENST00000488249 LOC730098B7Z3J9 87 aa1.36□□□□□ -2.19
RBM28-207ENST00000488249 DEFB106AQ8N104 65 aa1.36□□□□□ -2.19
RBM28-207ENST00000488249 TIMM8BQ9Y5J9 83 aaPredicted RBP1.36□□□□□ -2.19
RBM28-207ENST00000488249 ANKRD17O75179 2603 aaKnown RBP1.35□□□□□ -2.19
RBM28-207ENST00000488249 CPSF4LA6NMK7 179 aaKnown RBP1.35□□□□□ -2.19
RBM28-207ENST00000488249 SPINK4O60575 86 aa1.35□□□□□ -2.19
RBM28-207ENST00000488249 FXYD6P3P58550 94 aa1.35□□□□□ -2.19
RBM28-207ENST00000488249 UNQ6190/PRO20217Q6UXQ8 127 aa1.35□□□□□ -2.19
RBM28-207ENST00000488249 UNC79Q9P2D8 2635 aa1.35□□□□□ -2.19
RBM28-207ENST00000488249 ASXL3Q9C0F0 2248 aa1.34□□□□□ -2.19
RBM28-207ENST00000488249 PIN1P1O15428 100 aa1.34□□□□□ -2.19
RBM28-207ENST00000488249 KRTAP13-4Q3LI77 160 aa1.34□□□□□ -2.19
RBM28-207ENST00000488249 TECTAO75443 2155 aa1.34□□□□□ -2.2
RBM28-207ENST00000488249 ASCC3Q8N3C0 2202 aaKnown RBP1.34□□□□□ -2.2
RBM28-207ENST00000488249 HMCN1Q96RW7 5635 aa1.33□□□□□ -2.2
RBM28-207ENST00000488249 CACNA1GO43497 2377 aa1.33□□□□□ -2.2
RBM28-207ENST00000488249 PRB1P04280 392 aa1.33□□□□□ -2.2
RBM28-207ENST00000488249 RPL37P61927 97 aaKnown RBP1.33□□□□□ -2.2
RBM28-207ENST00000488249 SPINK13Q1W4C9 94 aa1.33□□□□□ -2.2
RBM28-207ENST00000488249 LINC00575Q6W349 94 aa1.33□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 90.6 ms