RNA–Protein interactions for RNA: ENST00000488146.5

DEPDC1-203, Transcript of DEP domain containing 1, humanhuman

TSL 2

Gene DEPDC1, Length 2,658 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-203ENST00000488146 KRTAP4-3Q9BYR4 195 aa1.55□□□□□ -2.16
DEPDC1-203ENST00000488146 C6orf48Q9UBA6 75 aa1.55□□□□□ -2.16
DEPDC1-203ENST00000488146 NAT8BQ9UHF3 227 aa1.55□□□□□ -2.16
DEPDC1-203ENST00000488146 TRBV10-2A0A0K0K1G8 114 aa1.55□□□□□ -2.16
DEPDC1-203ENST00000488146 TINCRA0A1B0GVN0 87 aa1.55□□□□□ -2.16
DEPDC1-203ENST00000488146 A0A1B0GXF2 115 aa1.55□□□□□ -2.16
DEPDC1-203ENST00000488146 SPRR1BP22528 89 aa1.55□□□□□ -2.16
DEPDC1-203ENST00000488146 FCER1GP30273 86 aa1.55□□□□□ -2.16
DEPDC1-203ENST00000488146 FUSP35637 526 aaKnown RBP eCLIP1.55□□□□□ -2.16
DEPDC1-203ENST00000488146 FAM104BQ5XKR9 115 aa1.55□□□□□ -2.16
DEPDC1-203ENST00000488146 SLC25A34Q6PIV7 304 aa1.55□□□□□ -2.16
DEPDC1-203ENST00000488146 DPH3Q96FX2 82 aa1.55□□□□□ -2.16
DEPDC1-203ENST00000488146 LIMD2Q9BT23 127 aa1.55□□□□□ -2.16
DEPDC1-203ENST00000488146 SNRPCP09234 159 aaKnown RBP1.54□□□□□ -2.16
DEPDC1-203ENST00000488146 IFI27P40305 119 aaPredicted RBP1.54□□□□□ -2.16
DEPDC1-203ENST00000488146 HAMPP81172 84 aa1.54□□□□□ -2.16
DEPDC1-203ENST00000488146 NXT2Q9NPJ8 142 aaKnown RBP1.54□□□□□ -2.16
DEPDC1-203ENST00000488146 TMEM242Q9NWH2 141 aa1.54□□□□□ -2.16
DEPDC1-203ENST00000488146 IGKV2D-26A0A0A0MRZ7 120 aa1.54□□□□□ -2.16
DEPDC1-203ENST00000488146 HIGD2BQ4VC39 106 aa1.54□□□□□ -2.16
DEPDC1-203ENST00000488146 C2orf66Q6UXQ4 117 aa1.54□□□□□ -2.16
DEPDC1-203ENST00000488146 PHF5AQ7RTV0 110 aaKnown RBP1.54□□□□□ -2.16
DEPDC1-203ENST00000488146 Q8N8P6 123 aa1.54□□□□□ -2.16
DEPDC1-203ENST00000488146 EIF5A2Q9GZV4 153 aaKnown RBP1.54□□□□□ -2.16
DEPDC1-203ENST00000488146 IGLV8-61A0A075B6I0 122 aa1.53□□□□□ -2.16
DEPDC1-203ENST00000488146 ZNF815PA8K554 130 aa1.53□□□□□ -2.16
DEPDC1-203ENST00000488146 M0R036 132 aa1.53□□□□□ -2.16
DEPDC1-203ENST00000488146 UBE2BP63146 152 aa1.53□□□□□ -2.16
DEPDC1-203ENST00000488146 IFITM2Q01629 132 aa1.53□□□□□ -2.16
DEPDC1-203ENST00000488146 PRR4Q16378 134 aa1.53□□□□□ -2.16
DEPDC1-203ENST00000488146 C9orf129Q5T035 196 aaKnown RBP1.53□□□□□ -2.16
DEPDC1-203ENST00000488146 SPRR4Q96PI1 79 aa1.53□□□□□ -2.16
DEPDC1-203ENST00000488146 SMIM3Q9BZL3 60 aa1.53□□□□□ -2.16
DEPDC1-203ENST00000488146 RPS10P5Q9NQ39 176 aa1.53□□□□□ -2.16
DEPDC1-203ENST00000488146 C22orf24Q9Y442 160 aa1.53□□□□□ -2.16
DEPDC1-203ENST00000488146 TRBV7-6A0A0J9YX20 115 aa1.53□□□□□ -2.16
DEPDC1-203ENST00000488146 H3BRM9 83 aa1.53□□□□□ -2.16
DEPDC1-203ENST00000488146 XCL1P47992 114 aa1.53□□□□□ -2.16
DEPDC1-203ENST00000488146 S100A12P80511 92 aa1.53□□□□□ -2.16
DEPDC1-203ENST00000488146 C10orf91Q5T1B1 145 aa1.53□□□□□ -2.16
DEPDC1-203ENST00000488146 TEX43Q6ZNM6 134 aa1.53□□□□□ -2.16
DEPDC1-203ENST00000488146 DAND5Q8N907 189 aa1.53□□□□□ -2.16
DEPDC1-203ENST00000488146 FAM213BQ8TBF2 198 aa1.53□□□□□ -2.16
DEPDC1-203ENST00000488146 SFT2D1Q8WV19 159 aa1.53□□□□□ -2.16
DEPDC1-203ENST00000488146 FAM104AQ969W3 186 aa1.53□□□□□ -2.16
DEPDC1-203ENST00000488146 CYSLTR1Q9Y271 337 aa1.53□□□□□ -2.16
DEPDC1-203ENST00000488146 LRP2P98164 4655 aa1.53□□□□□ -2.17
DEPDC1-203ENST00000488146 IGKV2-24A0A0C4DH68 120 aa1.53□□□□□ -2.17
DEPDC1-203ENST00000488146 KRTAP13-2Q52LG2 175 aa1.53□□□□□ -2.17
DEPDC1-203ENST00000488146 Q6ZUT4 128 aa1.53□□□□□ -2.17
DEPDC1-203ENST00000488146 RNASE7Q9H1E1 156 aaKnown RBP1.53□□□□□ -2.17
DEPDC1-203ENST00000488146 KCNQ1DNQ9H478 68 aa1.53□□□□□ -2.17
DEPDC1-203ENST00000488146 FLG2Q5D862 2391 aaPredicted RBP1.52□□□□□ -2.17
DEPDC1-203ENST00000488146 IGKV2D-29A0A075B6S2 120 aaPredicted RBP1.52□□□□□ -2.17
DEPDC1-203ENST00000488146 IGKV2-29A2NJV5 120 aaPredicted RBP1.52□□□□□ -2.17
DEPDC1-203ENST00000488146 IGIPA6NJ69 53 aa1.52□□□□□ -2.17
DEPDC1-203ENST00000488146 M0R378 163 aa1.52□□□□□ -2.17
DEPDC1-203ENST00000488146 NDUFC2O95298 119 aa1.52□□□□□ -2.17
DEPDC1-203ENST00000488146 IGLC3P0DOY3 106 aa1.52□□□□□ -2.17
DEPDC1-203ENST00000488146 PRB4P10163 310 aaPredicted RBP1.52□□□□□ -2.17
DEPDC1-203ENST00000488146 NDUFA6P56556 154 aa1.52□□□□□ -2.17
DEPDC1-203ENST00000488146 KRTAP10-7P60409 375 aaPredicted RBP1.52□□□□□ -2.17
DEPDC1-203ENST00000488146 IFITM3Q01628 133 aa1.52□□□□□ -2.17
DEPDC1-203ENST00000488146 KRTAP19-2Q3LHN2 52 aa1.52□□□□□ -2.17
DEPDC1-203ENST00000488146 ORMDL3Q8N138 153 aa1.52□□□□□ -2.17
DEPDC1-203ENST00000488146 TOMM6Q96B49 74 aa1.52□□□□□ -2.17
DEPDC1-203ENST00000488146 MAP1LC3AQ9H492 121 aa1.52□□□□□ -2.17
DEPDC1-203ENST00000488146 NAT8Q9UHE5 227 aa1.52□□□□□ -2.17
DEPDC1-203ENST00000488146 V9GYV3 84 aa1.52□□□□□ -2.17
DEPDC1-203ENST00000488146 TRBV20OR9-2A0A075B6H5 130 aa1.52□□□□□ -2.17
DEPDC1-203ENST00000488146 FXYD6-FXYD2A0A087WZ82 144 aa1.52□□□□□ -2.17
DEPDC1-203ENST00000488146 K7EN84 100 aa1.52□□□□□ -2.17
DEPDC1-203ENST00000488146 CKS1BP61024 79 aa1.52□□□□□ -2.17
DEPDC1-203ENST00000488146 RPL39LQ96EH5 51 aaKnown RBP1.52□□□□□ -2.17
DEPDC1-203ENST00000488146 TMEM126AQ9H061 195 aa1.52□□□□□ -2.17
DEPDC1-203ENST00000488146 TMSB15BA0A087X1C1 80 aa1.51□□□□□ -2.17
DEPDC1-203ENST00000488146 KRTAP4-16G5E9R7 235 aaPredicted RBP1.51□□□□□ -2.17
DEPDC1-203ENST00000488146 UBE2AP49459 152 aa1.51□□□□□ -2.17
DEPDC1-203ENST00000488146 Q1RN00 199 aa1.51□□□□□ -2.17
DEPDC1-203ENST00000488146 RGS21Q2M5E4 152 aa1.51□□□□□ -2.17
DEPDC1-203ENST00000488146 MRPL51Q4U2R6 128 aaKnown RBP1.51□□□□□ -2.17
DEPDC1-203ENST00000488146 C6orf99Q4VX62 202 aa1.51□□□□□ -2.17
DEPDC1-203ENST00000488146 CLPSL2Q6UWE3 100 aa1.51□□□□□ -2.17
DEPDC1-203ENST00000488146 CBLN2Q8IUK8 224 aa1.51□□□□□ -2.17
DEPDC1-203ENST00000488146 NKAPP1Q8N9T2 125 aa1.51□□□□□ -2.17
DEPDC1-203ENST00000488146 GNG13Q9P2W3 67 aa1.51□□□□□ -2.17
DEPDC1-203ENST00000488146 MUC21A0A0G2JKD1 596 aa1.51□□□□□ -2.17
DEPDC1-203ENST00000488146 NMUP48645 174 aa1.51□□□□□ -2.17
DEPDC1-203ENST00000488146 KRTAP10-6P60371 365 aaPredicted RBP1.51□□□□□ -2.17
DEPDC1-203ENST00000488146 JOSD1Q15040 202 aaPredicted RBP1.51□□□□□ -2.17
DEPDC1-203ENST00000488146 COX7B2Q8TF08 81 aa1.51□□□□□ -2.17
DEPDC1-203ENST00000488146 PPDPFLQ8WWR9 84 aa1.51□□□□□ -2.17
DEPDC1-203ENST00000488146 LINC00167Q96N53 147 aa1.51□□□□□ -2.17
DEPDC1-203ENST00000488146 RETNLBQ9BQ08 111 aa1.51□□□□□ -2.17
DEPDC1-203ENST00000488146 HIGD1CA8MV81 97 aa1.5□□□□□ -2.17
DEPDC1-203ENST00000488146 RAB5AP20339 215 aa1.5□□□□□ -2.17
DEPDC1-203ENST00000488146 PEA15Q15121 130 aa1.5□□□□□ -2.17
DEPDC1-203ENST00000488146 UNQ6190/PRO20217Q6UXQ8 127 aa1.5□□□□□ -2.17
DEPDC1-203ENST00000488146 Q6ZVH6 145 aa1.5□□□□□ -2.17
DEPDC1-203ENST00000488146 MAP1LC3CQ9BXW4 147 aa1.5□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 85.9 ms