RNA–Protein interactions for RNA: ENST00000485407.1

NHLRC3-205, Transcript of NHL repeat containing 3, humanhuman

TSL 3

Gene NHLRC3, Length 623 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC3-205ENST00000485407 FA2HQ7L5A8 372 aa3.55□□□□□ -1.84
NHLRC3-205ENST00000485407 Q8N8P6 123 aa3.55□□□□□ -1.84
NHLRC3-205ENST00000485407 OR5A1Q8NGJ0 315 aa3.55□□□□□ -1.84
NHLRC3-205ENST00000485407 CDC42SE2Q9NRR3 84 aa3.55□□□□□ -1.84
NHLRC3-205ENST00000485407 TGIF2-C20orf24A0A0A6YYL0 155 aa3.54□□□□□ -1.84
NHLRC3-205ENST00000485407 LINC01546A6NGU7 62 aa3.54□□□□□ -1.84
NHLRC3-205ENST00000485407 MP68P56378 58 aa3.54□□□□□ -1.84
NHLRC3-205ENST00000485407 MRPS36P82909 103 aaKnown RBP3.54□□□□□ -1.84
NHLRC3-205ENST00000485407 FABP9Q0Z7S8 132 aa3.54□□□□□ -1.84
NHLRC3-205ENST00000485407 RNASE13Q5GAN3 156 aaKnown RBP3.54□□□□□ -1.84
NHLRC3-205ENST00000485407 ZNF664Q8N3J9 261 aa3.54□□□□□ -1.84
NHLRC3-205ENST00000485407 Q8N814 137 aa3.54□□□□□ -1.84
NHLRC3-205ENST00000485407 SMCO4Q9NRQ5 59 aa3.54□□□□□ -1.84
NHLRC3-205ENST00000485407 SPANXA1Q9NS26 97 aa3.54□□□□□ -1.84
NHLRC3-205ENST00000485407 UBE2D4Q9Y2X8 147 aa3.54□□□□□ -1.84
NHLRC3-205ENST00000485407 TRAPPC1Q9Y5R8 145 aa3.54□□□□□ -1.84
NHLRC3-205ENST00000485407 C16orf90A8MZG2 172 aa3.53□□□□□ -1.84
NHLRC3-205ENST00000485407 C1orf196B1AJZ1 125 aa3.53□□□□□ -1.84
NHLRC3-205ENST00000485407 BPY2O14599 106 aa3.53□□□□□ -1.84
NHLRC3-205ENST00000485407 IFI27P40305 119 aaPredicted RBP3.53□□□□□ -1.84
NHLRC3-205ENST00000485407 SS18Q15532 418 aa3.53□□□□□ -1.84
NHLRC3-205ENST00000485407 KRTAP26-1Q6PEX3 210 aa3.53□□□□□ -1.84
NHLRC3-205ENST00000485407 SPATA12Q7Z6I5 190 aa3.53□□□□□ -1.84
NHLRC3-205ENST00000485407 C15orf56Q8N910 161 aa3.53□□□□□ -1.84
NHLRC3-205ENST00000485407 DEFB104AQ8WTQ1 72 aa3.53□□□□□ -1.84
NHLRC3-205ENST00000485407 LINC00959A0A1B0GUT2 108 aa3.52□□□□□ -1.85
NHLRC3-205ENST00000485407 RAB5BP61020 215 aa3.52□□□□□ -1.85
NHLRC3-205ENST00000485407 SYCNQ0VAF6 134 aa3.52□□□□□ -1.85
NHLRC3-205ENST00000485407 FAM19A3Q7Z5A8 133 aa3.52□□□□□ -1.85
NHLRC3-205ENST00000485407 KRTAP2-2Q9BYT5 123 aa3.52□□□□□ -1.85
NHLRC3-205ENST00000485407 SND1-IT1Q9HBX3 110 aa3.52□□□□□ -1.85
NHLRC3-205ENST00000485407 CYSLTR1Q9Y271 337 aa3.52□□□□□ -1.85
NHLRC3-205ENST00000485407 FSIP2Q5CZC0 6907 aa3.51□□□□□ -1.85
NHLRC3-205ENST00000485407 IGLV10-54A0A075B6I4 117 aa3.51□□□□□ -1.85
NHLRC3-205ENST00000485407 S100A2P29034 98 aa3.51□□□□□ -1.85
NHLRC3-205ENST00000485407 RPL39P62891 51 aaKnown RBP3.51□□□□□ -1.85
NHLRC3-205ENST00000485407 CLPSL2Q6UWE3 100 aa3.51□□□□□ -1.85
NHLRC3-205ENST00000485407 TOMM6Q96B49 74 aa3.51□□□□□ -1.85
NHLRC3-205ENST00000485407 TMEM141Q96I45 108 aa3.51□□□□□ -1.85
NHLRC3-205ENST00000485407 TRAV16A0A0A6YYK6 109 aaPredicted RBP3.5□□□□□ -1.85
NHLRC3-205ENST00000485407 IGKV3OR2-268A0A0C4DH90 116 aa3.5□□□□□ -1.85
NHLRC3-205ENST00000485407 TMEM223A0PJW6 202 aa3.5□□□□□ -1.85
NHLRC3-205ENST00000485407 IGIPA6NJ69 53 aa3.5□□□□□ -1.85
NHLRC3-205ENST00000485407 CNBPP62633 177 aaKnown RBP3.5□□□□□ -1.85
NHLRC3-205ENST00000485407 SEC11AP67812 179 aa3.5□□□□□ -1.85
NHLRC3-205ENST00000485407 WFDC2Q14508 124 aa3.5□□□□□ -1.85
NHLRC3-205ENST00000485407 C18orf32Q8TCD1 76 aa3.5□□□□□ -1.85
NHLRC3-205ENST00000485407 AMELXQ99217 191 aa3.5□□□□□ -1.85
NHLRC3-205ENST00000485407 C2orf88Q9BSF0 95 aa3.5□□□□□ -1.85
NHLRC3-205ENST00000485407 PKHD1L1Q86WI1 4243 aa3.49□□□□□ -1.85
NHLRC3-205ENST00000485407 GVQW2A0A096LPI5 108 aaPredicted RBP3.49□□□□□ -1.85
NHLRC3-205ENST00000485407 TRAV13-1A0A0B4J241 112 aa3.49□□□□□ -1.85
NHLRC3-205ENST00000485407 IGHV1-58A0A0C4DH39 117 aa3.49□□□□□ -1.85
NHLRC3-205ENST00000485407 COLCA2A8K830 154 aa3.49□□□□□ -1.85
NHLRC3-205ENST00000485407 COX7A2LO14548 114 aa3.49□□□□□ -1.85
NHLRC3-205ENST00000485407 APOMO95445 188 aa3.49□□□□□ -1.85
NHLRC3-205ENST00000485407 XCL1P47992 114 aa3.49□□□□□ -1.85
NHLRC3-205ENST00000485407 LUZP6Q538Z0 58 aa3.49□□□□□ -1.85
NHLRC3-205ENST00000485407 Q6ZUT4 128 aa3.49□□□□□ -1.85
NHLRC3-205ENST00000485407 C9orf163Q8N9P6 203 aa3.49□□□□□ -1.85
NHLRC3-205ENST00000485407 CHCHD1Q96BP2 118 aaKnown RBP3.49□□□□□ -1.85
NHLRC3-205ENST00000485407 SCGB3A1Q96QR1 104 aa3.49□□□□□ -1.85
NHLRC3-205ENST00000485407 CRCT1Q9UGL9 99 aa3.49□□□□□ -1.85
NHLRC3-205ENST00000485407 PKIGQ9Y2B9 76 aa3.49□□□□□ -1.85
NHLRC3-205ENST00000485407 LRP1Q07954 4544 aaKnown RBP3.49□□□□□ -1.85
NHLRC3-205ENST00000485407 IGLV2-33A0A075B6J2 118 aaPredicted RBP3.48□□□□□ -1.85
NHLRC3-205ENST00000485407 LECT2O14960 151 aa3.48□□□□□ -1.85
NHLRC3-205ENST00000485407 HBDP02042 147 aa3.48□□□□□ -1.85
NHLRC3-205ENST00000485407 TRGC2P03986 189 aa3.48□□□□□ -1.85
NHLRC3-205ENST00000485407 S100A1P23297 94 aa3.48□□□□□ -1.85
NHLRC3-205ENST00000485407 UBE2D1P51668 147 aa3.48□□□□□ -1.85
NHLRC3-205ENST00000485407 OR10D4PQ8NGN7 298 aa3.48□□□□□ -1.85
NHLRC3-205ENST00000485407 CIRBP-AS1Q8TBR5 109 aa3.48□□□□□ -1.85
NHLRC3-205ENST00000485407 DNAH8Q96JB1 4490 aa3.48□□□□□ -1.85
NHLRC3-205ENST00000485407 A0A096LNJ9 63 aa3.47□□□□□ -1.85
NHLRC3-205ENST00000485407 TMEM238C9JI98 176 aa3.47□□□□□ -1.85
NHLRC3-205ENST00000485407 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP3.47□□□□□ -1.85
NHLRC3-205ENST00000485407 ZNF861PO60384 105 aa3.47□□□□□ -1.85
NHLRC3-205ENST00000485407 KRTAP10-1P60331 282 aa3.47□□□□□ -1.85
NHLRC3-205ENST00000485407 HERVK_113P63121 156 aa3.47□□□□□ -1.85
NHLRC3-205ENST00000485407 Q6ZSA8 131 aa3.47□□□□□ -1.85
NHLRC3-205ENST00000485407 FAT3Q8TDW7 4589 aa3.46□□□□□ -1.85
NHLRC3-205ENST00000485407 IGHV3-64A0A075B6Q5 118 aa3.46□□□□□ -1.86
NHLRC3-205ENST00000485407 MT3P25713 68 aa3.46□□□□□ -1.86
NHLRC3-205ENST00000485407 DDTP30046 118 aa3.46□□□□□ -1.86
NHLRC3-205ENST00000485407 KRTAP10-6P60371 365 aaPredicted RBP3.46□□□□□ -1.86
NHLRC3-205ENST00000485407 KRTAP10-7P60409 375 aaPredicted RBP3.46□□□□□ -1.86
NHLRC3-205ENST00000485407 BATFQ16520 125 aa3.46□□□□□ -1.86
NHLRC3-205ENST00000485407 DEFB116Q30KQ4 102 aa3.46□□□□□ -1.86
NHLRC3-205ENST00000485407 SDIM1Q6ZPB5 146 aa3.46□□□□□ -1.86
NHLRC3-205ENST00000485407 C5orf38Q86SI9 138 aa3.46□□□□□ -1.86
NHLRC3-205ENST00000485407 BAGE3Q86Y29 109 aa3.46□□□□□ -1.86
NHLRC3-205ENST00000485407 CST9LQ9H4G1 147 aa3.46□□□□□ -1.86
NHLRC3-205ENST00000485407 DSCR10P59022 87 aa3.45□□□□□ -1.86
NHLRC3-205ENST00000485407 CIRBPQ14011 172 aaKnown RBP3.45□□□□□ -1.86
NHLRC3-205ENST00000485407 Q6ZRU5 148 aa3.45□□□□□ -1.86
NHLRC3-205ENST00000485407 LINC00474Q9P2X8 69 aa3.45□□□□□ -1.86
NHLRC3-205ENST00000485407 IGLV4-69A0A075B6H9 119 aa3.44□□□□□ -1.86
NHLRC3-205ENST00000485407 TRAV12-1A0A0B4J245 112 aa3.44□□□□□ -1.86
NHLRC3-205ENST00000485407 H3BRM9 83 aa3.44□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms