RNA–Protein interactions for RNA: ENST00000482558.5

SNX13-208, Transcript of sorting nexin 13, humanhuman

TSL 2

Gene SNX13, Length 1,139 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-208ENST00000482558 SLC25A20O43772 301 aa5.29□□□□□ -1.56
SNX13-208ENST00000482558 C2CD3Q4AC94 2353 aa5.28□□□□□ -1.56
SNX13-208ENST00000482558 TRBV10-2A0A0K0K1G8 114 aa5.28□□□□□ -1.56
SNX13-208ENST00000482558 H3BNG1 76 aa5.28□□□□□ -1.56
SNX13-208ENST00000482558 DEFB135Q30KP9 77 aa5.28□□□□□ -1.56
SNX13-208ENST00000482558 Q8IZM0 81 aa5.28□□□□□ -1.56
SNX13-208ENST00000482558 ANKRD29Q8N6D5 301 aa5.28□□□□□ -1.56
SNX13-208ENST00000482558 CARD19Q96LW7 228 aa5.28□□□□□ -1.56
SNX13-208ENST00000482558 JMJD1CQ15652 2540 aa5.28□□□□□ -1.56
SNX13-208ENST00000482558 NOTCH3Q9UM47 2321 aa5.28□□□□□ -1.56
SNX13-208ENST00000482558 NSD1Q96L73 2696 aaPredicted RBP5.27□□□□□ -1.57
SNX13-208ENST00000482558 IGLV4-60A0A075B6I1 120 aa5.27□□□□□ -1.57
SNX13-208ENST00000482558 H7C2G1 150 aa5.27□□□□□ -1.57
SNX13-208ENST00000482558 LST1O00453 97 aa5.27□□□□□ -1.57
SNX13-208ENST00000482558 NOTCH2Q04721 2471 aa5.27□□□□□ -1.57
SNX13-208ENST00000482558 COX17Q14061 63 aa5.27□□□□□ -1.57
SNX13-208ENST00000482558 REG3GQ6UW15 175 aa5.27□□□□□ -1.57
SNX13-208ENST00000482558 Q8NAQ8 132 aa5.27□□□□□ -1.57
SNX13-208ENST00000482558 C9JAW5 83 aa5.26□□□□□ -1.57
SNX13-208ENST00000482558 COX7A2LO14548 114 aa5.26□□□□□ -1.57
SNX13-208ENST00000482558 NDUFS5O43920 106 aa5.26□□□□□ -1.57
SNX13-208ENST00000482558 LELP1Q5T871 98 aa5.26□□□□□ -1.57
SNX13-208ENST00000482558 NKAPP1Q8N9T2 125 aa5.26□□□□□ -1.57
SNX13-208ENST00000482558 FN1P02751 2386 aaKnown RBP5.25□□□□□ -1.57
SNX13-208ENST00000482558 RPL37AP8A6NKH3 93 aa5.25□□□□□ -1.57
SNX13-208ENST00000482558 H0YGX0 51 aa5.25□□□□□ -1.57
SNX13-208ENST00000482558 TRACP01848 142 aa5.25□□□□□ -1.57
SNX13-208ENST00000482558 CRPP02741 224 aa5.25□□□□□ -1.57
SNX13-208ENST00000482558 KIAA0087Q14695 138 aa5.25□□□□□ -1.57
SNX13-208ENST00000482558 TOMM7Q9P0U1 55 aa5.25□□□□□ -1.57
SNX13-208ENST00000482558 RPL28P46779 137 aaKnown RBP5.24□□□□□ -1.57
SNX13-208ENST00000482558 LINC00158P58513 81 aa5.24□□□□□ -1.57
SNX13-208ENST00000482558 CKS1BP61024 79 aa5.24□□□□□ -1.57
SNX13-208ENST00000482558 EGFEM1PQ0D2K5 195 aa5.24□□□□□ -1.57
SNX13-208ENST00000482558 C2orf82Q6UX34 121 aa5.24□□□□□ -1.57
SNX13-208ENST00000482558 SMIM20Q8N5G0 67 aa5.24□□□□□ -1.57
SNX13-208ENST00000482558 OR13C6PQ8NH95 151 aa5.24□□□□□ -1.57
SNX13-208ENST00000482558 C11orf68Q9H3H3 251 aaKnown RBP5.24□□□□□ -1.57
SNX13-208ENST00000482558 SND1-IT1Q9HBX3 110 aa5.24□□□□□ -1.57
SNX13-208ENST00000482558 IGKV3OR2-268A0A0C4DH90 116 aa5.23□□□□□ -1.57
SNX13-208ENST00000482558 NPC2P61916 151 aa5.23□□□□□ -1.57
SNX13-208ENST00000482558 REG3AQ06141 175 aa5.23□□□□□ -1.57
SNX13-208ENST00000482558 C5orf38Q86SI9 138 aa5.23□□□□□ -1.57
SNX13-208ENST00000482558 MIR7-3HGQ8N6C7 128 aa5.23□□□□□ -1.57
SNX13-208ENST00000482558 DAND5Q8N907 189 aa5.23□□□□□ -1.57
SNX13-208ENST00000482558 KLK5Q9Y337 293 aaPredicted RBP5.23□□□□□ -1.57
SNX13-208ENST00000482558 OTOGQ6ZRI0 2925 aa5.23□□□□□ -1.57
SNX13-208ENST00000482558 PSPHP1O15172 72 aa5.22□□□□□ -1.57
SNX13-208ENST00000482558 SNCGO76070 127 aa5.22□□□□□ -1.57
SNX13-208ENST00000482558 NDUFC2O95298 119 aa5.22□□□□□ -1.57
SNX13-208ENST00000482558 ANGP03950 147 aaKnown RBP5.22□□□□□ -1.57
SNX13-208ENST00000482558 XCL1P47992 114 aa5.22□□□□□ -1.57
SNX13-208ENST00000482558 SOSTDC1Q6X4U4 206 aa5.22□□□□□ -1.57
SNX13-208ENST00000482558 LINC00269Q8N2A0 174 aa5.22□□□□□ -1.57
SNX13-208ENST00000482558 C3orf56Q8N813 242 aa5.22□□□□□ -1.57
SNX13-208ENST00000482558 UBE2WQ96B02 151 aa5.22□□□□□ -1.57
SNX13-208ENST00000482558 A0A1B0GX51 115 aa5.21□□□□□ -1.58
SNX13-208ENST00000482558 ACYP1P07311 99 aa5.21□□□□□ -1.58
SNX13-208ENST00000482558 PRR4Q16378 134 aa5.21□□□□□ -1.58
SNX13-208ENST00000482558 DEFB121Q5J5C9 76 aa5.21□□□□□ -1.58
SNX13-208ENST00000482558 PRR34Q9NV39 138 aa5.21□□□□□ -1.58
SNX13-208ENST00000482558 CCL18P55774 89 aa5.2□□□□□ -1.58
SNX13-208ENST00000482558 CELA1Q9UNI1 258 aa5.2□□□□□ -1.58
SNX13-208ENST00000482558 HIVEP1P15822 2718 aa5.19□□□□□ -1.58
SNX13-208ENST00000482558 A0A096LPF7 62 aa5.19□□□□□ -1.58
SNX13-208ENST00000482558 GVQW2A0A096LPI5 108 aaPredicted RBP5.19□□□□□ -1.58
SNX13-208ENST00000482558 DNAL4O96015 105 aa5.19□□□□□ -1.58
SNX13-208ENST00000482558 INAFM2P0DMQ5 153 aa5.19□□□□□ -1.58
SNX13-208ENST00000482558 KRTAP21-3Q3LHN1 58 aa5.19□□□□□ -1.58
SNX13-208ENST00000482558 LYPD5Q6UWN5 251 aa5.19□□□□□ -1.58
SNX13-208ENST00000482558 CLEC2BQ92478 149 aa5.19□□□□□ -1.58
SNX13-208ENST00000482558 CUBNO60494 3623 aa5.18□□□□□ -1.58
SNX13-208ENST00000482558 SMIM26A0A096LP01 95 aa5.18□□□□□ -1.58
SNX13-208ENST00000482558 A0A0J9YWU9 116 aa5.18□□□□□ -1.58
SNX13-208ENST00000482558 C8orf87E5RJ46 101 aa5.18□□□□□ -1.58
SNX13-208ENST00000482558 H3BQ85 93 aa5.18□□□□□ -1.58
SNX13-208ENST00000482558 DEFB4AO15263 64 aa5.18□□□□□ -1.58
SNX13-208ENST00000482558 HTN3P15516 51 aa5.18□□□□□ -1.58
SNX13-208ENST00000482558 C6orf99Q4VX62 202 aa5.18□□□□□ -1.58
SNX13-208ENST00000482558 TMEM126AQ9H061 195 aa5.18□□□□□ -1.58
SNX13-208ENST00000482558 NIPBLQ6KC79 2804 aaeCLIP5.17□□□□□ -1.58
SNX13-208ENST00000482558 FBN3Q75N90 2809 aa5.17□□□□□ -1.58
SNX13-208ENST00000482558 IGKV2-28A0A075B6P5 120 aa5.17□□□□□ -1.58
SNX13-208ENST00000482558 IGKV2D-28P01615 120 aa5.17□□□□□ -1.58
SNX13-208ENST00000482558 PMAIP1Q13794 54 aa5.17□□□□□ -1.58
SNX13-208ENST00000482558 KRTAP24-1Q3LI83 254 aa5.17□□□□□ -1.58
SNX13-208ENST00000482558 LINC00337Q8N6G1 96 aa5.17□□□□□ -1.58
SNX13-208ENST00000482558 DNHD1Q96M86 4753 aa5.17□□□□□ -1.58
SNX13-208ENST00000482558 ATRQ13535 2644 aa5.16□□□□□ -1.58
SNX13-208ENST00000482558 BAALC-AS2P0C853 105 aa5.16□□□□□ -1.58
SNX13-208ENST00000482558 LINC01547P58512 204 aaPredicted RBP5.16□□□□□ -1.58
SNX13-208ENST00000482558 NANOS2P60321 138 aaKnown RBP5.16□□□□□ -1.58
SNX13-208ENST00000482558 SPAG11BQ08648 103 aa5.16□□□□□ -1.58
SNX13-208ENST00000482558 KPRPQ5T749 579 aaPredicted RBP5.16□□□□□ -1.58
SNX13-208ENST00000482558 SMIM11BQ8TCY0 68 aa5.16□□□□□ -1.58
SNX13-208ENST00000482558 TEX49A0A1B0GTD5 131 aa5.15□□□□□ -1.59
SNX13-208ENST00000482558 Q6Q795 121 aa5.15□□□□□ -1.59
SNX13-208ENST00000482558 CLPSL2Q6UWE3 100 aa5.15□□□□□ -1.59
SNX13-208ENST00000482558 C15orf53Q8NAA6 179 aa5.15□□□□□ -1.59
SNX13-208ENST00000482558 KLK12Q9UKR0 248 aa5.15□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 6 ms