RNA–Protein interactions for RNA: ENST00000479511.1

GAPVD1-217, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 3

Gene GAPVD1, Length 575 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-217ENST00000479511 NXT2Q9NPJ8 142 aaKnown RBP3.78□□□□□ -1.8
GAPVD1-217ENST00000479511 LINC01549A6NIU2 74 aa3.77□□□□□ -1.81
GAPVD1-217ENST00000479511 NDUFC2O95298 119 aa3.77□□□□□ -1.81
GAPVD1-217ENST00000479511 IGLC6P0CF74 106 aa3.77□□□□□ -1.81
GAPVD1-217ENST00000479511 RNASE4P34096 147 aaKnown RBP3.77□□□□□ -1.81
GAPVD1-217ENST00000479511 GDF5OSQ5U4N7 250 aa3.77□□□□□ -1.81
GAPVD1-217ENST00000479511 FOXI2Q6ZQN5 318 aa3.77□□□□□ -1.81
GAPVD1-217ENST00000479511 Q8NDZ9 215 aa3.77□□□□□ -1.81
GAPVD1-217ENST00000479511 DYNLRB2Q8TF09 96 aa3.77□□□□□ -1.81
GAPVD1-217ENST00000479511 TMEM70Q9BUB7 260 aa3.77□□□□□ -1.81
GAPVD1-217ENST00000479511 STAB2Q8WWQ8 2551 aa3.77□□□□□ -1.81
GAPVD1-217ENST00000479511 IGKV3-7A0A075B6H7 116 aa3.76□□□□□ -1.81
GAPVD1-217ENST00000479511 TRAV7A0A075B6U4 112 aa3.76□□□□□ -1.81
GAPVD1-217ENST00000479511 C2orf70A6NJV1 201 aa3.76□□□□□ -1.81
GAPVD1-217ENST00000479511 D6R8Y8 96 aa3.76□□□□□ -1.81
GAPVD1-217ENST00000479511 K7EMI3 77 aa3.76□□□□□ -1.81
GAPVD1-217ENST00000479511 P0C880 135 aa3.76□□□□□ -1.81
GAPVD1-217ENST00000479511 DCANP1Q8TF63 244 aa3.76□□□□□ -1.81
GAPVD1-217ENST00000479511 HHLA3Q9XRX5 114 aa3.76□□□□□ -1.81
GAPVD1-217ENST00000479511 KIAA1109Q2LD37 5005 aa3.76□□□□□ -1.81
GAPVD1-217ENST00000479511 HECTD4Q9Y4D8 3996 aa3.76□□□□□ -1.81
GAPVD1-217ENST00000479511 SORL1Q92673 2214 aa3.75□□□□□ -1.81
GAPVD1-217ENST00000479511 C7orf71A4D174 169 aa3.75□□□□□ -1.81
GAPVD1-217ENST00000479511 NUPR1O60356 82 aa3.75□□□□□ -1.81
GAPVD1-217ENST00000479511 KRTAP5-4Q6L8H1 288 aa3.75□□□□□ -1.81
GAPVD1-217ENST00000479511 AP1S3Q96PC3 154 aa3.75□□□□□ -1.81
GAPVD1-217ENST00000479511 C20orf78Q9BR46 151 aa3.75□□□□□ -1.81
GAPVD1-217ENST00000479511 DPH3P1Q9H4G8 78 aa3.75□□□□□ -1.81
GAPVD1-217ENST00000479511 ABCA13Q86UQ4 5058 aa3.74□□□□□ -1.81
GAPVD1-217ENST00000479511 IGHV1-24A0A0C4DH33 117 aa3.74□□□□□ -1.81
GAPVD1-217ENST00000479511 MUC21A0A0G2JKD1 596 aa3.74□□□□□ -1.81
GAPVD1-217ENST00000479511 MUC21A0A140T8X8 626 aa3.74□□□□□ -1.81
GAPVD1-217ENST00000479511 SDHAF1A6NFY7 115 aa3.74□□□□□ -1.81
GAPVD1-217ENST00000479511 SYS1-DBNDD2H3BUS1 97 aa3.74□□□□□ -1.81
GAPVD1-217ENST00000479511 HBDP02042 147 aa3.74□□□□□ -1.81
GAPVD1-217ENST00000479511 C3orf79P0CE67 100 aa3.74□□□□□ -1.81
GAPVD1-217ENST00000479511 TDRG1Q3Y452 100 aa3.74□□□□□ -1.81
GAPVD1-217ENST00000479511 LINC01554Q52M75 96 aa3.74□□□□□ -1.81
GAPVD1-217ENST00000479511 C10orf99Q6UWK7 81 aa3.74□□□□□ -1.81
GAPVD1-217ENST00000479511 FAM19A2Q8N3H0 131 aa3.74□□□□□ -1.81
GAPVD1-217ENST00000479511 KRTAP4-4Q9BYR3 166 aa3.74□□□□□ -1.81
GAPVD1-217ENST00000479511 UQCR10Q9UDW1 63 aa3.74□□□□□ -1.81
GAPVD1-217ENST00000479511 PSORS1C2Q9UIG4 136 aa3.74□□□□□ -1.81
GAPVD1-217ENST00000479511 FRAS1Q86XX4 4008 aa3.73□□□□□ -1.81
GAPVD1-217ENST00000479511 STARD9Q9P2P6 4700 aa3.73□□□□□ -1.81
GAPVD1-217ENST00000479511 H3BVH4 76 aa3.73□□□□□ -1.81
GAPVD1-217ENST00000479511 M0R143 59 aa3.73□□□□□ -1.81
GAPVD1-217ENST00000479511 FCER1GP30273 86 aa3.73□□□□□ -1.81
GAPVD1-217ENST00000479511 IFI27P40305 119 aaPredicted RBP3.73□□□□□ -1.81
GAPVD1-217ENST00000479511 INSL3P51460 131 aa3.73□□□□□ -1.81
GAPVD1-217ENST00000479511 SPATA45Q537H7 98 aa3.73□□□□□ -1.81
GAPVD1-217ENST00000479511 Q8N8P6 123 aa3.73□□□□□ -1.81
GAPVD1-217ENST00000479511 C20orf166-AS1Q96NR2 134 aa3.73□□□□□ -1.81
GAPVD1-217ENST00000479511 PMCHL2Q9BQD1 86 aa3.73□□□□□ -1.81
GAPVD1-217ENST00000479511 PRO1933Q9H354 126 aa3.73□□□□□ -1.81
GAPVD1-217ENST00000479511 ST20Q9HBF5 79 aa3.73□□□□□ -1.81
GAPVD1-217ENST00000479511 TIMM8BQ9Y5J9 83 aaPredicted RBP3.73□□□□□ -1.81
GAPVD1-217ENST00000479511 MUC4Q99102 2169 aa3.73□□□□□ -1.81
GAPVD1-217ENST00000479511 TRAV12-3A0A0B4J271 114 aa3.72□□□□□ -1.81
GAPVD1-217ENST00000479511 LINC01546A6NGU7 62 aa3.72□□□□□ -1.81
GAPVD1-217ENST00000479511 LINC00587B1AMM8 73 aa3.72□□□□□ -1.81
GAPVD1-217ENST00000479511 H7C2G1 150 aa3.72□□□□□ -1.81
GAPVD1-217ENST00000479511 LY6G6CO95867 125 aa3.72□□□□□ -1.81
GAPVD1-217ENST00000479511 HLA-DRB4P13762 266 aa3.72□□□□□ -1.81
GAPVD1-217ENST00000479511 EVI2AP22794 236 aa3.72□□□□□ -1.81
GAPVD1-217ENST00000479511 DEFB114Q30KQ6 69 aa3.72□□□□□ -1.81
GAPVD1-217ENST00000479511 KTN1-AS1Q86SY8 53 aa3.72□□□□□ -1.81
GAPVD1-217ENST00000479511 HLA-DRB4X5D2U9 266 aa3.72□□□□□ -1.81
GAPVD1-217ENST00000479511 MGPP08493 103 aa3.71□□□□□ -1.82
GAPVD1-217ENST00000479511 SCGB1A1P11684 91 aa3.71□□□□□ -1.82
GAPVD1-217ENST00000479511 DEFB131AP59861 70 aa3.71□□□□□ -1.82
GAPVD1-217ENST00000479511 SS18Q15532 418 aa3.71□□□□□ -1.82
GAPVD1-217ENST00000479511 DEFB136Q30KP8 78 aa3.71□□□□□ -1.82
GAPVD1-217ENST00000479511 KRTAP13-3Q3SY46 172 aa3.71□□□□□ -1.82
GAPVD1-217ENST00000479511 LYRM7Q5U5X0 104 aa3.71□□□□□ -1.82
GAPVD1-217ENST00000479511 LINC01545Q5VT33 79 aa3.71□□□□□ -1.82
GAPVD1-217ENST00000479511 IFI27L1Q96BM0 104 aa3.71□□□□□ -1.82
GAPVD1-217ENST00000479511 SCGB3A1Q96QR1 104 aa3.71□□□□□ -1.82
GAPVD1-217ENST00000479511 LINC00467Q9BRT7 94 aa3.71□□□□□ -1.82
GAPVD1-217ENST00000479511 HUWE1Q7Z6Z7 4374 aaKnown RBP3.71□□□□□ -1.82
GAPVD1-217ENST00000479511 A8MWV9 139 aa3.7□□□□□ -1.82
GAPVD1-217ENST00000479511 NCR2O95944 276 aa3.7□□□□□ -1.82
GAPVD1-217ENST00000479511 PRB4P10163 310 aaPredicted RBP3.7□□□□□ -1.82
GAPVD1-217ENST00000479511 PLNP26678 52 aa3.7□□□□□ -1.82
GAPVD1-217ENST00000479511 C14orf144Q96I85 54 aa3.7□□□□□ -1.82
GAPVD1-217ENST00000479511 SMIM2Q9BVW6 85 aa3.7□□□□□ -1.82
GAPVD1-217ENST00000479511 IMUPQ9GZP8 106 aa3.7□□□□□ -1.82
GAPVD1-217ENST00000479511 PLECQ15149 4684 aaKnown RBP3.7□□□□□ -1.82
GAPVD1-217ENST00000479511 A8MTW9 85 aa3.69□□□□□ -1.82
GAPVD1-217ENST00000479511 M0R2P5 195 aa3.69□□□□□ -1.82
GAPVD1-217ENST00000479511 IGLC3P0DOY3 106 aa3.69□□□□□ -1.82
GAPVD1-217ENST00000479511 RNASE3P12724 160 aaKnown RBP3.69□□□□□ -1.82
GAPVD1-217ENST00000479511 SPINK13Q1W4C9 94 aa3.69□□□□□ -1.82
GAPVD1-217ENST00000479511 RRN3P1Q2M238 152 aa3.69□□□□□ -1.82
GAPVD1-217ENST00000479511 COL5A1-AS1Q5SY13 56 aa3.69□□□□□ -1.82
GAPVD1-217ENST00000479511 TMEM141Q96I45 108 aa3.69□□□□□ -1.82
GAPVD1-217ENST00000479511 C2orf88Q9BSF0 95 aa3.69□□□□□ -1.82
GAPVD1-217ENST00000479511 TRAV12-2A0A075B6T6 113 aa3.68□□□□□ -1.82
GAPVD1-217ENST00000479511 TRAV12-1A0A0B4J245 112 aa3.68□□□□□ -1.82
GAPVD1-217ENST00000479511 TRBV6-5A0A0K0K1A5 114 aa3.68□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms